Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC3.76□□□□□ -1.81
CLDN20P56880 AC020910.2-201ENST00000603635 610 ntBASIC3.76□□□□□ -1.81
CLDN20P56880 AC092354.1-201ENST00000606057 376 ntBASIC3.76□□□□□ -1.81
CLDN20P56880 AC135507.1-201ENST00000607214 561 ntBASIC3.76□□□□□ -1.81
CLDN20P56880 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC3.76□□□□□ -1.81
CLDN20P56880 AC099669.2-201ENST00000616549 437 ntBASIC3.76□□□□□ -1.81
CLDN20P56880 DLEU1_2.1-201ENST00000617920 342 ntBASIC3.76□□□□□ -1.81
CLDN20P56880 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC3.76□□□□□ -1.81
CLDN20P56880 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC3.76□□□□□ -1.81
CLDN20P56880 AC092192.1-201ENST00000633154 1018 ntBASIC3.76□□□□□ -1.81
CLDN20P56880 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
CLDN20P56880 SPATA31D2P-201ENST00000429999 4388 ntBASIC3.76□□□□□ -1.81
CLDN20P56880 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CLDN20P56880 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC3.76□□□□□ -1.81
CLDN20P56880 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3.76□□□□□ -1.81
CLDN20P56880 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
CLDN20P56880 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CLDN20P56880 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
CLDN20P56880 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
CLDN20P56880 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC3.76□□□□□ -1.81
CLDN20P56880 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.75□□□□□ -1.81
CLDN20P56880 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
CLDN20P56880 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
CLDN20P56880 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
CLDN20P56880 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
CLDN20P56880 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
CLDN20P56880 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
CLDN20P56880 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
CLDN20P56880 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
CLDN20P56880 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.75□□□□□ -1.81
CLDN20P56880 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
CLDN20P56880 AL672167.1-206ENST00000356293 943 ntBASIC3.75□□□□□ -1.81
CLDN20P56880 MIR423-201ENST00000362201 94 ntBASIC3.75□□□□□ -1.81
CLDN20P56880 RNU6-878P-201ENST00000384578 110 ntBASIC3.75□□□□□ -1.81
CLDN20P56880 RNU6-952P-201ENST00000391164 108 ntBASIC3.75□□□□□ -1.81
CLDN20P56880 SNORA26.8-201ENST00000391306 124 ntBASIC3.75□□□□□ -1.81
CLDN20P56880 AC007066.1-201ENST00000392902 381 ntBASIC3.75□□□□□ -1.81
CLDN20P56880 RPL31P1-201ENST00000398116 372 ntBASIC3.75□□□□□ -1.81
CLDN20P56880 RPS3AP26-201ENST00000398259 784 ntBASIC3.75□□□□□ -1.81
CLDN20P56880 RNA5SP317-201ENST00000410176 116 ntBASIC3.75□□□□□ -1.81
CLDN20P56880 RNA5SP311-201ENST00000411290 116 ntBASIC3.75□□□□□ -1.81
CLDN20P56880 RPL7P8-201ENST00000411964 730 ntBASIC3.75□□□□□ -1.81
CLDN20P56880 ZNF736P2Y-201ENST00000416040 1279 ntBASIC3.75□□□□□ -1.81
CLDN20P56880 NPM1P11-201ENST00000417106 855 ntBASIC3.75□□□□□ -1.81
CLDN20P56880 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
CLDN20P56880 RPS27AP12-201ENST00000429552 465 ntBASIC3.75□□□□□ -1.81
CLDN20P56880 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC3.75□□□□□ -1.81
CLDN20P56880 AL117351.1-201ENST00000438864 766 ntBASIC3.75□□□□□ -1.81
CLDN20P56880 AC127537.2-201ENST00000439258 465 ntBASIC3.75□□□□□ -1.81
CLDN20P56880 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC3.75□□□□□ -1.81
CLDN20P56880 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC3.75□□□□□ -1.81
CLDN20P56880 AC114755.5-201ENST00000447760 831 ntBASIC3.75□□□□□ -1.81
CLDN20P56880 NDUFS5P3-201ENST00000450668 321 ntBASIC3.75□□□□□ -1.81
CLDN20P56880 ZNF114P1-201ENST00000453500 292 ntBASIC3.75□□□□□ -1.81
CLDN20P56880 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC3.75□□□□□ -1.81
CLDN20P56880 RNA5SP246-201ENST00000458909 119 ntBASIC3.75□□□□□ -1.81
CLDN20P56880 RPS7P7-201ENST00000463499 571 ntBASIC3.75□□□□□ -1.81
CLDN20P56880 RPL31P50-201ENST00000471002 296 ntBASIC3.75□□□□□ -1.81
CLDN20P56880 AC087312.1-201ENST00000471411 480 ntBASIC3.75□□□□□ -1.81
CLDN20P56880 AC068587.1-201ENST00000483613 781 ntBASIC3.75□□□□□ -1.81
CLDN20P56880 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC3.75□□□□□ -1.81
CLDN20P56880 AC006499.5-201ENST00000505037 514 ntBASIC3.75□□□□□ -1.81
CLDN20P56880 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC3.75□□□□□ -1.81
CLDN20P56880 MTND5P4-201ENST00000514978 288 ntBASIC3.75□□□□□ -1.81
CLDN20P56880 RNA5SP315-201ENST00000516340 116 ntBASIC3.75□□□□□ -1.81
CLDN20P56880 RNA5SP312-201ENST00000517068 116 ntBASIC3.75□□□□□ -1.81
CLDN20P56880 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC3.75□□□□□ -1.81
CLDN20P56880 NARSP2-201ENST00000518524 679 ntBASIC3.75□□□□□ -1.81
CLDN20P56880 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC3.75□□□□□ -1.81
CLDN20P56880 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC3.75□□□□□ -1.81
CLDN20P56880 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
CLDN20P56880 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC3.75□□□□□ -1.81
CLDN20P56880 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC3.75□□□□□ -1.81
CLDN20P56880 ROCK1P1-201ENST00000573767 549 ntBASIC3.75□□□□□ -1.81
CLDN20P56880 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC3.75□□□□□ -1.81
CLDN20P56880 AP001180.3-201ENST00000582221 145 ntBASIC3.75□□□□□ -1.81
CLDN20P56880 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC3.75□□□□□ -1.81
CLDN20P56880 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC3.75□□□□□ -1.81
CLDN20P56880 AL357080.1-201ENST00000617394 239 ntBASIC3.75□□□□□ -1.81
CLDN20P56880 AC073968.1-201ENST00000618594 637 ntBASIC3.75□□□□□ -1.81
CLDN20P56880 AL356266.1-201ENST00000623311 483 ntBASIC3.75□□□□□ -1.81
CLDN20P56880 MIR492-201ENST00000638676 116 ntBASIC3.75□□□□□ -1.81
CLDN20P56880 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
CLDN20P56880 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC3.75□□□□□ -1.81
CLDN20P56880 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
CLDN20P56880 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
CLDN20P56880 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
CLDN20P56880 CR383658.2-201ENST00000547576 1525 ntBASIC3.75□□□□□ -1.81
CLDN20P56880 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.75□□□□□ -1.81
CLDN20P56880 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC3.75□□□□□ -1.81
CLDN20P56880 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC3.74□□□□□ -1.81
CLDN20P56880 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.74□□□□□ -1.81
CLDN20P56880 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
CLDN20P56880 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
CLDN20P56880 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
CLDN20P56880 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
CLDN20P56880 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
CLDN20P56880 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC3.74□□□□□ -1.81
CLDN20P56880 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
CLDN20P56880 RNA5SP130-201ENST00000364431 114 ntBASIC3.74□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 90.9 ms