Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 RNY3-201ENST00000365484 102 ntBASIC4.81□□□□□ -1.64
GFRA1P56159 RNU6-38P-201ENST00000384085 107 ntBASIC4.81□□□□□ -1.64
GFRA1P56159 Y_RNA.431-201ENST00000384086 102 ntBASIC4.81□□□□□ -1.64
GFRA1P56159 Y_RNA.490-201ENST00000384413 102 ntBASIC4.81□□□□□ -1.64
GFRA1P56159 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
GFRA1P56159 IL6-206ENST00000407492 926 ntTSL 3 BASIC4.81□□□□□ -1.64
GFRA1P56159 RNU4-78P-201ENST00000410940 126 ntBASIC4.81□□□□□ -1.64
GFRA1P56159 RPL21P24-201ENST00000413752 448 ntBASIC4.81□□□□□ -1.64
GFRA1P56159 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.81□□□□□ -1.64
GFRA1P56159 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC4.81□□□□□ -1.64
GFRA1P56159 BEND7P1-201ENST00000422058 457 ntBASIC4.81□□□□□ -1.64
GFRA1P56159 AL354766.1-201ENST00000423396 542 ntBASIC4.81□□□□□ -1.64
GFRA1P56159 AC016712.1-201ENST00000431088 378 ntBASIC4.81□□□□□ -1.64
GFRA1P56159 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
GFRA1P56159 AC099670.2-201ENST00000435130 321 ntBASIC4.81□□□□□ -1.64
GFRA1P56159 RPL23AP33-201ENST00000442301 452 ntBASIC4.81□□□□□ -1.64
GFRA1P56159 TRAPPC2P3-201ENST00000443200 321 ntBASIC4.81□□□□□ -1.64
GFRA1P56159 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC4.81□□□□□ -1.64
GFRA1P56159 MRPL48P1-201ENST00000445390 636 ntBASIC4.81□□□□□ -1.64
GFRA1P56159 IGKV1OR-3-201ENST00000446944 348 ntBASIC4.81□□□□□ -1.64
GFRA1P56159 IFNWP4-201ENST00000453148 294 ntBASIC4.81□□□□□ -1.64
GFRA1P56159 AC233279.1-201ENST00000455300 423 ntBASIC4.81□□□□□ -1.64
GFRA1P56159 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
GFRA1P56159 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC4.81□□□□□ -1.64
GFRA1P56159 RNU6-333P-201ENST00000459117 107 ntBASIC4.81□□□□□ -1.64
GFRA1P56159 AC005532.2-201ENST00000467154 373 ntBASIC4.81□□□□□ -1.64
GFRA1P56159 AC004453.1-201ENST00000487895 408 ntBASIC4.81□□□□□ -1.64
GFRA1P56159 RPL7P23-201ENST00000493874 747 ntBASIC4.81□□□□□ -1.64
GFRA1P56159 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC4.81□□□□□ -1.64
GFRA1P56159 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC4.81□□□□□ -1.64
GFRA1P56159 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC4.81□□□□□ -1.64
GFRA1P56159 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC4.81□□□□□ -1.64
GFRA1P56159 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC4.81□□□□□ -1.64
GFRA1P56159 AC100870.1-201ENST00000522035 505 ntBASIC4.81□□□□□ -1.64
GFRA1P56159 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC4.81□□□□□ -1.64
GFRA1P56159 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.81□□□□□ -1.64
GFRA1P56159 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC4.81□□□□□ -1.64
GFRA1P56159 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC4.81□□□□□ -1.64
GFRA1P56159 AC013244.1-201ENST00000604279 193 ntBASIC4.81□□□□□ -1.64
GFRA1P56159 AC012443.1-201ENST00000605605 231 ntBASIC4.81□□□□□ -1.64
GFRA1P56159 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC4.81□□□□□ -1.64
GFRA1P56159 AC244107.2-201ENST00000611773 76 ntBASIC4.81□□□□□ -1.64
GFRA1P56159 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC4.81□□□□□ -1.64
GFRA1P56159 AC025034.2-201ENST00000623264 286 ntBASIC4.81□□□□□ -1.64
GFRA1P56159 AL353662.3-201ENST00000625131 237 ntBASIC4.81□□□□□ -1.64
GFRA1P56159 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC4.81□□□□□ -1.64
GFRA1P56159 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
GFRA1P56159 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
GFRA1P56159 EXOC5P1-201ENST00000510543 1969 ntBASIC4.81□□□□□ -1.64
GFRA1P56159 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
GFRA1P56159 AC010266.2-201ENST00000564741 3255 ntBASIC4.81□□□□□ -1.64
GFRA1P56159 AP004289.2-201ENST00000444413 1457 ntBASIC4.81□□□□□ -1.64
GFRA1P56159 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
GFRA1P56159 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC4.81□□□□□ -1.64
GFRA1P56159 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
GFRA1P56159 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
GFRA1P56159 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
GFRA1P56159 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC4.8□□□□□ -1.64
GFRA1P56159 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
GFRA1P56159 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
GFRA1P56159 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC4.8□□□□□ -1.64
GFRA1P56159 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
GFRA1P56159 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
GFRA1P56159 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC4.8□□□□□ -1.64
GFRA1P56159 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
GFRA1P56159 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
GFRA1P56159 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
GFRA1P56159 Y_RNA.67-201ENST00000362870 100 ntBASIC4.8□□□□□ -1.64
GFRA1P56159 RNU6-960P-201ENST00000364056 120 ntBASIC4.8□□□□□ -1.64
GFRA1P56159 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
GFRA1P56159 HSPA8P15-201ENST00000401676 786 ntBASIC4.8□□□□□ -1.64
GFRA1P56159 DPPA2P3-201ENST00000411853 655 ntBASIC4.8□□□□□ -1.64
GFRA1P56159 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC4.8□□□□□ -1.64
GFRA1P56159 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC4.8□□□□□ -1.64
GFRA1P56159 NDUFB4P5-201ENST00000415445 361 ntBASIC4.8□□□□□ -1.64
GFRA1P56159 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC4.8□□□□□ -1.64
GFRA1P56159 AC138761.5-201ENST00000433967 325 ntBASIC4.8□□□□□ -1.64
GFRA1P56159 MRPS18BP2-201ENST00000434310 759 ntBASIC4.8□□□□□ -1.64
GFRA1P56159 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC4.8□□□□□ -1.64
GFRA1P56159 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC4.8□□□□□ -1.64
GFRA1P56159 RPL21P133-201ENST00000443666 476 ntBASIC4.8□□□□□ -1.64
GFRA1P56159 PTMAP3-201ENST00000447474 330 ntBASIC4.8□□□□□ -1.64
GFRA1P56159 AC104634.1-201ENST00000452720 462 ntBASIC4.8□□□□□ -1.64
GFRA1P56159 PPP1R2P5-201ENST00000457256 603 ntBASIC4.8□□□□□ -1.64
GFRA1P56159 AL162395.1-201ENST00000457882 422 ntBASIC4.8□□□□□ -1.64
GFRA1P56159 RNU6-329P-201ENST00000459618 107 ntBASIC4.8□□□□□ -1.64
GFRA1P56159 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC4.8□□□□□ -1.64
GFRA1P56159 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC4.8□□□□□ -1.64
GFRA1P56159 RPS4XP20-201ENST00000505751 772 ntBASIC4.8□□□□□ -1.64
GFRA1P56159 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC4.8□□□□□ -1.64
GFRA1P56159 Y_RNA.665-201ENST00000516177 98 ntBASIC4.8□□□□□ -1.64
GFRA1P56159 RNU6-277P-201ENST00000516272 106 ntBASIC4.8□□□□□ -1.64
GFRA1P56159 NARSP2-201ENST00000518524 679 ntBASIC4.8□□□□□ -1.64
GFRA1P56159 NACA-211ENST00000548563 827 ntTSL 5 BASIC4.8□□□□□ -1.64
GFRA1P56159 SCOCP1-201ENST00000554676 349 ntBASIC4.8□□□□□ -1.64
GFRA1P56159 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
GFRA1P56159 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC4.8□□□□□ -1.64
GFRA1P56159 AC005034.5-201ENST00000604219 466 ntBASIC4.8□□□□□ -1.64
GFRA1P56159 IGLCOR22-2-201ENST00000605398 313 ntBASIC4.8□□□□□ -1.64
GFRA1P56159 AC104237.2-201ENST00000612456 443 ntBASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 11.8 ms