Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
NUP98P52948 CYCSP45-201ENST00000402289 315 ntBASIC2.96□□□□□ -1.94
NUP98P52948 LSM5-206ENST00000409987 504 ntTSL 5 BASIC2.96□□□□□ -1.94
NUP98P52948 VN1R96P-201ENST00000446052 858 ntBASIC2.96□□□□□ -1.94
NUP98P52948 VN1R79P-201ENST00000593540 513 ntBASIC2.96□□□□□ -1.94
NUP98P52948 VN1R78P-201ENST00000597393 564 ntBASIC2.96□□□□□ -1.94
NUP98P52948 AC114546.3-201ENST00000623582 1734 ntBASIC2.95□□□□□ -1.94
NUP98P52948 Z99496.1-201ENST00000469424 1477 ntBASIC2.95□□□□□ -1.94
NUP98P52948 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.95□□□□□ -1.94
NUP98P52948 ZNF542P-204ENST00000482727 1305 ntBASIC2.95□□□□□ -1.94
NUP98P52948 AC104454.1-201ENST00000421341 1401 ntBASIC2.95□□□□□ -1.94
NUP98P52948 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC2.95□□□□□ -1.94
NUP98P52948 SNORA51.4-201ENST00000364993 124 ntBASIC2.95□□□□□ -1.94
NUP98P52948 AL024474.1-201ENST00000404655 591 ntBASIC2.95□□□□□ -1.94
NUP98P52948 PTP4A1P5-201ENST00000420305 455 ntBASIC2.95□□□□□ -1.94
NUP98P52948 AL513175.2-201ENST00000422071 443 ntBASIC2.95□□□□□ -1.94
NUP98P52948 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC2.95□□□□□ -1.94
NUP98P52948 RPS24P8-201ENST00000431490 402 ntBASIC2.95□□□□□ -1.94
NUP98P52948 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC2.95□□□□□ -1.94
NUP98P52948 HMGB3P21-201ENST00000452483 547 ntBASIC2.95□□□□□ -1.94
NUP98P52948 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.95□□□□□ -1.94
NUP98P52948 RN7SL283P-201ENST00000489055 303 ntBASIC2.95□□□□□ -1.94
NUP98P52948 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC2.95□□□□□ -1.94
NUP98P52948 AC068714.1-201ENST00000559623 800 ntBASIC2.95□□□□□ -1.94
NUP98P52948 AC090312.2-201ENST00000582687 378 ntBASIC2.95□□□□□ -1.94
NUP98P52948 AC004825.2-201ENST00000616634 455 ntBASIC2.95□□□□□ -1.94
NUP98P52948 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.95□□□□□ -1.94
NUP98P52948 MIR7843-201ENST00000622274 79 ntBASIC2.95□□□□□ -1.94
NUP98P52948 XPOTP1-201ENST00000443317 2398 ntBASIC2.95□□□□□ -1.94
NUP98P52948 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.95□□□□□ -1.94
NUP98P52948 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
NUP98P52948 AC009487.4-201ENST00000624969 3585 ntBASIC2.94□□□□□ -1.94
NUP98P52948 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
NUP98P52948 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
NUP98P52948 RNA5SP456-201ENST00000364002 114 ntBASIC2.94□□□□□ -1.94
NUP98P52948 MIR92A2-201ENST00000385299 75 ntBASIC2.94□□□□□ -1.94
NUP98P52948 AC011816.1-201ENST00000441346 546 ntBASIC2.94□□□□□ -1.94
NUP98P52948 AC096638.1-201ENST00000444678 216 ntBASIC2.94□□□□□ -1.94
NUP98P52948 RPL7P31-201ENST00000450192 724 ntBASIC2.94□□□□□ -1.94
NUP98P52948 EIF2S2P4-201ENST00000461070 984 ntBASIC2.94□□□□□ -1.94
NUP98P52948 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC2.94□□□□□ -1.94
NUP98P52948 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC2.94□□□□□ -1.94
NUP98P52948 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC2.94□□□□□ -1.94
NUP98P52948 IGKV2-36-201ENST00000519999 223 ntBASIC2.94□□□□□ -1.94
NUP98P52948 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC2.94□□□□□ -1.94
NUP98P52948 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC2.94□□□□□ -1.94
NUP98P52948 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC2.94□□□□□ -1.94
NUP98P52948 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
NUP98P52948 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC2.94□□□□□ -1.94
NUP98P52948 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC2.94□□□□□ -1.94
NUP98P52948 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC2.94□□□□□ -1.94
NUP98P52948 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC2.94□□□□□ -1.94
NUP98P52948 TMEM161BP1-201ENST00000457388 1457 ntBASIC2.93□□□□□ -1.94
NUP98P52948 CUL1P1-201ENST00000509510 2425 ntBASIC2.93□□□□□ -1.94
NUP98P52948 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
NUP98P52948 MIR764-201ENST00000390811 85 ntBASIC2.93□□□□□ -1.94
NUP98P52948 MTCO3P31-201ENST00000405526 789 ntBASIC2.93□□□□□ -1.94
NUP98P52948 MTCO3P21-201ENST00000430791 643 ntBASIC2.93□□□□□ -1.94
NUP98P52948 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC2.93□□□□□ -1.94
NUP98P52948 COX6CP2-201ENST00000444980 225 ntBASIC2.93□□□□□ -1.94
NUP98P52948 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.93□□□□□ -1.94
NUP98P52948 UBL5P3-201ENST00000475112 231 ntBASIC2.93□□□□□ -1.94
NUP98P52948 AP000926.1-201ENST00000479573 241 ntBASIC2.93□□□□□ -1.94
NUP98P52948 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.93□□□□□ -1.94
NUP98P52948 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC2.93□□□□□ -1.94
NUP98P52948 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC2.93□□□□□ -1.94
NUP98P52948 AC123768.4-201ENST00000616244 701 ntBASIC2.93□□□□□ -1.94
NUP98P52948 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC2.93□□□□□ -1.94
NUP98P52948 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC2.93□□□□□ -1.94
NUP98P52948 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
NUP98P52948 MIR504-201ENST00000385065 83 ntBASIC2.93□□□□□ -1.94
NUP98P52948 RNA5SP239-201ENST00000410218 129 ntBASIC2.93□□□□□ -1.94
NUP98P52948 TEX41-204ENST00000423031 491 ntTSL 4 BASIC2.93□□□□□ -1.94
NUP98P52948 NDUFS5P3-201ENST00000450668 321 ntBASIC2.93□□□□□ -1.94
NUP98P52948 POU5F1P7-201ENST00000508759 541 ntBASIC2.93□□□□□ -1.94
NUP98P52948 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC2.93□□□□□ -1.94
NUP98P52948 MAL2-205ENST00000521048 575 ntTSL 4 BASIC2.93□□□□□ -1.94
NUP98P52948 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC2.93□□□□□ -1.94
NUP98P52948 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC2.93□□□□□ -1.94
NUP98P52948 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC2.93□□□□□ -1.94
NUP98P52948 AC069234.5-201ENST00000611056 416 ntBASIC2.93□□□□□ -1.94
NUP98P52948 AC004696.1-201ENST00000614345 607 ntBASIC2.93□□□□□ -1.94
NUP98P52948 MIR6873-201ENST00000622788 63 ntBASIC2.93□□□□□ -1.94
NUP98P52948 AC110994.2-201ENST00000635481 492 ntBASIC2.93□□□□□ -1.94
NUP98P52948 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
NUP98P52948 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
NUP98P52948 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC2.93□□□□□ -1.94
NUP98P52948 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
NUP98P52948 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.92□□□□□ -1.94
NUP98P52948 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
NUP98P52948 XIAPP3-201ENST00000312918 795 ntBASIC2.92□□□□□ -1.94
NUP98P52948 RNU1-73P-201ENST00000383971 164 ntBASIC2.92□□□□□ -1.94
NUP98P52948 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC2.92□□□□□ -1.94
NUP98P52948 MTCO2P17-201ENST00000424336 677 ntBASIC2.92□□□□□ -1.94
NUP98P52948 AL590103.1-201ENST00000434488 307 ntBASIC2.92□□□□□ -1.94
NUP98P52948 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC2.92□□□□□ -1.94
NUP98P52948 RNA5SP281-201ENST00000516504 135 ntBASIC2.92□□□□□ -1.94
NUP98P52948 AC123904.3-201ENST00000547218 814 ntBASIC2.92□□□□□ -1.94
NUP98P52948 AC091515.1-201ENST00000548110 679 ntBASIC2.92□□□□□ -1.94
NUP98P52948 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 114.3 ms