Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 DPPA3P3-201ENST00000603842 430 ntBASIC5.72□□□□□ -1.49
USP11P51784 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC5.72□□□□□ -1.49
USP11P51784 CCL14-204ENST00000622526 472 ntTSL 3 BASIC5.72□□□□□ -1.49
USP11P51784 AC091925.1-201ENST00000623204 462 ntBASIC5.72□□□□□ -1.49
USP11P51784 AC079597.1-201ENST00000624306 508 ntBASIC5.72□□□□□ -1.49
USP11P51784 AL359757.2-201ENST00000624309 274 ntBASIC5.72□□□□□ -1.49
USP11P51784 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
USP11P51784 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
USP11P51784 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC5.72□□□□□ -1.49
USP11P51784 VPS35P1-201ENST00000563400 1518 ntBASIC5.72□□□□□ -1.49
USP11P51784 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
USP11P51784 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
USP11P51784 UQCRC2P1-201ENST00000417777 1332 ntBASIC5.72□□□□□ -1.49
USP11P51784 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
USP11P51784 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC5.72□□□□□ -1.49
USP11P51784 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC5.71□□□□□ -1.49
USP11P51784 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
USP11P51784 KPNA2P2-201ENST00000419546 1489 ntBASIC5.71□□□□□ -1.49
USP11P51784 DDX18P4-201ENST00000511690 1966 ntBASIC5.71□□□□□ -1.49
USP11P51784 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.71□□□□□ -1.49
USP11P51784 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
USP11P51784 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
USP11P51784 BTBD10P1-201ENST00000549824 1352 ntBASIC5.71□□□□□ -1.5
USP11P51784 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
USP11P51784 RNU6-1097P-201ENST00000363586 107 ntBASIC5.71□□□□□ -1.5
USP11P51784 RNU6-317P-201ENST00000384031 107 ntBASIC5.71□□□□□ -1.5
USP11P51784 AC009302.1-201ENST00000417147 390 ntBASIC5.71□□□□□ -1.5
USP11P51784 AC127526.1-201ENST00000417526 366 ntBASIC5.71□□□□□ -1.5
USP11P51784 HSPE1P1-201ENST00000421494 318 ntBASIC5.71□□□□□ -1.5
USP11P51784 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC5.71□□□□□ -1.5
USP11P51784 GPR143P-201ENST00000434155 205 ntBASIC5.71□□□□□ -1.5
USP11P51784 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC5.71□□□□□ -1.5
USP11P51784 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC5.71□□□□□ -1.5
USP11P51784 AC002381.1-201ENST00000447049 280 ntBASIC5.71□□□□□ -1.5
USP11P51784 MTND3P16-201ENST00000452205 344 ntBASIC5.71□□□□□ -1.5
USP11P51784 AL163973.1-201ENST00000484753 577 ntBASIC5.71□□□□□ -1.5
USP11P51784 AC093270.2-201ENST00000486157 792 ntBASIC5.71□□□□□ -1.5
USP11P51784 TMEM248P1-201ENST00000510579 951 ntBASIC5.71□□□□□ -1.5
USP11P51784 AC114797.1-201ENST00000514003 728 ntBASIC5.71□□□□□ -1.5
USP11P51784 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC5.71□□□□□ -1.5
USP11P51784 RNU6-264P-201ENST00000517134 104 ntBASIC5.71□□□□□ -1.5
USP11P51784 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC5.71□□□□□ -1.5
USP11P51784 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC5.71□□□□□ -1.5
USP11P51784 AC012339.2-201ENST00000523996 453 ntBASIC5.71□□□□□ -1.5
USP11P51784 COPS8P3-201ENST00000526024 482 ntBASIC5.71□□□□□ -1.5
USP11P51784 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC5.71□□□□□ -1.5
USP11P51784 AL163153.1-201ENST00000554223 283 ntBASIC5.71□□□□□ -1.5
USP11P51784 AC068831.4-201ENST00000556118 109 ntBASIC5.71□□□□□ -1.5
USP11P51784 SULT1C2P1-202ENST00000562418 459 ntBASIC5.71□□□□□ -1.5
USP11P51784 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC5.71□□□□□ -1.5
USP11P51784 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC5.71□□□□□ -1.5
USP11P51784 MIR4646-201ENST00000580775 63 ntBASIC5.71□□□□□ -1.5
USP11P51784 AC091905.4-201ENST00000623432 202 ntBASIC5.71□□□□□ -1.5
USP11P51784 AC092447.10-201ENST00000620607 1652 ntBASIC5.71□□□□□ -1.5
USP11P51784 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
USP11P51784 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
USP11P51784 RBPJP2-201ENST00000618187 1444 ntBASIC5.71□□□□□ -1.5
USP11P51784 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
USP11P51784 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC5.71□□□□□ -1.5
USP11P51784 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC5.71□□□□□ -1.5
USP11P51784 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
USP11P51784 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC5.71□□□□□ -1.5
USP11P51784 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC5.71□□□□□ -1.5
USP11P51784 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC5.71□□□□□ -1.5
USP11P51784 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.71□□□□□ -1.5
USP11P51784 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
USP11P51784 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
USP11P51784 AC097504.1-201ENST00000515103 2415 ntBASIC5.7□□□□□ -1.5
USP11P51784 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC5.7□□□□□ -1.5
USP11P51784 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
USP11P51784 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
USP11P51784 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.7□□□□□ -1.5
USP11P51784 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC5.7□□□□□ -1.5
USP11P51784 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC5.7□□□□□ -1.5
USP11P51784 RPL23AP57-201ENST00000332361 466 ntBASIC5.7□□□□□ -1.5
USP11P51784 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
USP11P51784 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
USP11P51784 RNY4P36-201ENST00000391116 96 ntBASIC5.7□□□□□ -1.5
USP11P51784 CD3D-202ENST00000392884 476 ntTSL 2 BASIC5.7□□□□□ -1.5
USP11P51784 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC5.7□□□□□ -1.5
USP11P51784 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC5.7□□□□□ -1.5
USP11P51784 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC5.7□□□□□ -1.5
USP11P51784 RGS17P1-201ENST00000423358 553 ntBASIC5.7□□□□□ -1.5
USP11P51784 USP9YP16-201ENST00000430287 407 ntBASIC5.7□□□□□ -1.5
USP11P51784 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC5.7□□□□□ -1.5
USP11P51784 RPL32P28-201ENST00000443577 397 ntBASIC5.7□□□□□ -1.5
USP11P51784 USP9YP23-201ENST00000455085 407 ntBASIC5.7□□□□□ -1.5
USP11P51784 RNU7-152P-201ENST00000458982 64 ntBASIC5.7□□□□□ -1.5
USP11P51784 AC007547.1-201ENST00000462177 490 ntBASIC5.7□□□□□ -1.5
USP11P51784 VN1R17P-201ENST00000472048 1090 ntBASIC5.7□□□□□ -1.5
USP11P51784 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
USP11P51784 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC5.7□□□□□ -1.5
USP11P51784 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC5.7□□□□□ -1.5
USP11P51784 BNIP3P6-201ENST00000549284 499 ntBASIC5.7□□□□□ -1.5
USP11P51784 AC006349.1-201ENST00000555526 235 ntBASIC5.7□□□□□ -1.5
USP11P51784 AC004817.2-201ENST00000561794 651 ntBASIC5.7□□□□□ -1.5
USP11P51784 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.7□□□□□ -1.5
USP11P51784 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC5.7□□□□□ -1.5
USP11P51784 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
USP11P51784 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms