Protein–RNA interactions for Protein: P49711

CTCF, Transcriptional repressor CTCF, humanhuman

Predicted RBP Predictions only

Length 727 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFP49711 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CTCFP49711 AL365440.1-201ENST00000436135 2167 ntBASIC4.46□□□□□ -1.7
CTCFP49711 AC093908.1-201ENST00000623125 8092 ntBASIC4.45□□□□□ -1.7
CTCFP49711 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CTCFP49711 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CTCFP49711 XIAPP3-201ENST00000312918 795 ntBASIC4.45□□□□□ -1.7
CTCFP49711 RNU5D-1-201ENST00000363299 116 ntBASIC4.45□□□□□ -1.7
CTCFP49711 Y_RNA.192-201ENST00000363977 102 ntBASIC4.45□□□□□ -1.7
CTCFP49711 RNU6-1243P-201ENST00000364028 107 ntBASIC4.45□□□□□ -1.7
CTCFP49711 RNU6-7-201ENST00000364784 107 ntBASIC4.45□□□□□ -1.7
CTCFP49711 RNU6-8-201ENST00000365467 107 ntBASIC4.45□□□□□ -1.7
CTCFP49711 RPL23AP47-201ENST00000408017 460 ntBASIC4.45□□□□□ -1.7
CTCFP49711 RPL31P2-201ENST00000413849 377 ntBASIC4.45□□□□□ -1.7
CTCFP49711 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC4.45□□□□□ -1.7
CTCFP49711 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC4.45□□□□□ -1.7
CTCFP49711 RPL31P54-201ENST00000429803 370 ntBASIC4.45□□□□□ -1.7
CTCFP49711 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC4.45□□□□□ -1.7
CTCFP49711 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC4.45□□□□□ -1.7
CTCFP49711 COX7BP2-201ENST00000437976 242 ntBASIC4.45□□□□□ -1.7
CTCFP49711 AL591719.1-201ENST00000444669 744 ntBASIC4.45□□□□□ -1.7
CTCFP49711 AL671855.1-201ENST00000446875 1203 ntBASIC4.45□□□□□ -1.7
CTCFP49711 UBDP1-202ENST00000457888 382 ntBASIC4.45□□□□□ -1.7
CTCFP49711 AL139824.2-201ENST00000458731 1095 ntBASIC4.45□□□□□ -1.7
CTCFP49711 RPL37P6-202ENST00000464216 403 ntBASIC4.45□□□□□ -1.7
CTCFP49711 AC010307.1-201ENST00000467206 836 ntBASIC4.45□□□□□ -1.7
CTCFP49711 AC087385.1-201ENST00000475062 312 ntBASIC4.45□□□□□ -1.7
CTCFP49711 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CTCFP49711 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC4.45□□□□□ -1.7
CTCFP49711 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC4.45□□□□□ -1.7
CTCFP49711 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.45□□□□□ -1.7
CTCFP49711 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC4.45□□□□□ -1.7
CTCFP49711 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC4.45□□□□□ -1.7
CTCFP49711 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC4.45□□□□□ -1.7
CTCFP49711 AC016065.2-201ENST00000514530 444 ntBASIC4.45□□□□□ -1.7
CTCFP49711 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC4.45□□□□□ -1.7
CTCFP49711 OR8L1P-201ENST00000534005 955 ntBASIC4.45□□□□□ -1.7
CTCFP49711 AC005832.3-201ENST00000537929 631 ntBASIC4.45□□□□□ -1.7
CTCFP49711 AC023050.2-201ENST00000544968 387 ntBASIC4.45□□□□□ -1.7
CTCFP49711 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC4.45□□□□□ -1.7
CTCFP49711 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC4.45□□□□□ -1.7
CTCFP49711 MTCYBP27-201ENST00000555160 670 ntBASIC4.45□□□□□ -1.7
CTCFP49711 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC4.45□□□□□ -1.7
CTCFP49711 MIR4504-201ENST00000577413 92 ntBASIC4.45□□□□□ -1.7
CTCFP49711 SNORD39.3-201ENST00000584451 71 ntBASIC4.45□□□□□ -1.7
CTCFP49711 AC020914.4-201ENST00000597690 277 ntBASIC4.45□□□□□ -1.7
CTCFP49711 BNIP3P26-201ENST00000600827 554 ntBASIC4.45□□□□□ -1.7
CTCFP49711 AL390838.2-201ENST00000602394 274 ntBASIC4.45□□□□□ -1.7
CTCFP49711 AC104763.2-201ENST00000604179 382 ntBASIC4.45□□□□□ -1.7
CTCFP49711 AC025588.2-201ENST00000604851 466 ntBASIC4.45□□□□□ -1.7
CTCFP49711 AC114878.2-201ENST00000604863 1251 ntBASIC4.45□□□□□ -1.7
CTCFP49711 AL451044.1-201ENST00000604867 238 ntBASIC4.45□□□□□ -1.7
CTCFP49711 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.45□□□□□ -1.7
CTCFP49711 AC007998.5-201ENST00000622938 237 ntBASIC4.45□□□□□ -1.7
CTCFP49711 AC073530.2-201ENST00000623987 261 ntBASIC4.45□□□□□ -1.7
CTCFP49711 AP000676.4-201ENST00000624659 623 ntBASIC4.45□□□□□ -1.7
CTCFP49711 AC006927.4-201ENST00000639187 543 ntBASIC4.45□□□□□ -1.7
CTCFP49711 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
CTCFP49711 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.45□□□□□ -1.7
CTCFP49711 ZNF807-201ENST00000328088 1707 ntBASIC4.45□□□□□ -1.7
CTCFP49711 AC117529.2-201ENST00000512159 2068 ntBASIC4.45□□□□□ -1.7
CTCFP49711 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CTCFP49711 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CTCFP49711 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
CTCFP49711 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CTCFP49711 DCAF13P1-201ENST00000495256 1330 ntBASIC4.45□□□□□ -1.7
CTCFP49711 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC4.44□□□□□ -1.7
CTCFP49711 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CTCFP49711 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.44□□□□□ -1.7
CTCFP49711 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CTCFP49711 MAPK6PS3-201ENST00000403865 2162 ntBASIC4.44□□□□□ -1.7
CTCFP49711 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
CTCFP49711 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.44□□□□□ -1.7
CTCFP49711 MIR449A-201ENST00000362113 91 ntBASIC4.44□□□□□ -1.7
CTCFP49711 Y_RNA.465-201ENST00000384293 102 ntBASIC4.44□□□□□ -1.7
CTCFP49711 RNU6-83P-201ENST00000384568 112 ntBASIC4.44□□□□□ -1.7
CTCFP49711 BTBD10P2-201ENST00000404779 676 ntBASIC4.44□□□□□ -1.7
CTCFP49711 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC4.44□□□□□ -1.7
CTCFP49711 AC004987.3-201ENST00000413879 771 ntBASIC4.44□□□□□ -1.7
CTCFP49711 MTCO2P21-201ENST00000419780 677 ntBASIC4.44□□□□□ -1.7
CTCFP49711 RPL7P53-201ENST00000421245 739 ntBASIC4.44□□□□□ -1.7
CTCFP49711 AC017083.1-201ENST00000428093 483 ntBASIC4.44□□□□□ -1.7
CTCFP49711 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.44□□□□□ -1.7
CTCFP49711 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CTCFP49711 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.44□□□□□ -1.7
CTCFP49711 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC4.44□□□□□ -1.7
CTCFP49711 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC4.44□□□□□ -1.7
CTCFP49711 BTF3P5-201ENST00000457252 467 ntBASIC4.44□□□□□ -1.7
CTCFP49711 AC011825.1-201ENST00000484967 388 ntBASIC4.44□□□□□ -1.7
CTCFP49711 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC4.44□□□□□ -1.7
CTCFP49711 AC108145.1-201ENST00000503770 153 ntBASIC4.44□□□□□ -1.7
CTCFP49711 AC097462.2-201ENST00000504623 481 ntBASIC4.44□□□□□ -1.7
CTCFP49711 SNX5P1-201ENST00000505757 1041 ntBASIC4.44□□□□□ -1.7
CTCFP49711 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC4.44□□□□□ -1.7
CTCFP49711 RNU4-60P-201ENST00000517239 135 ntBASIC4.44□□□□□ -1.7
CTCFP49711 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4.44□□□□□ -1.7
CTCFP49711 ARL2BPP5-201ENST00000523141 481 ntBASIC4.44□□□□□ -1.7
CTCFP49711 AP001189.2-201ENST00000527320 189 ntBASIC4.44□□□□□ -1.7
CTCFP49711 RFPL1S-203ENST00000539579 330 ntBASIC4.44□□□□□ -1.7
CTCFP49711 LRRC34P1-201ENST00000542742 915 ntBASIC4.44□□□□□ -1.7
CTCFP49711 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms