Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC4.03□□□□□ -1.76
HADHAP40939 OR8R1P-201ENST00000543943 764 ntBASIC4.03□□□□□ -1.76
HADHAP40939 AC091516.1-201ENST00000549191 703 ntBASIC4.03□□□□□ -1.76
HADHAP40939 AL121603.1-201ENST00000553815 142 ntBASIC4.03□□□□□ -1.76
HADHAP40939 CYCSP2-201ENST00000558168 301 ntBASIC4.03□□□□□ -1.76
HADHAP40939 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.03□□□□□ -1.76
HADHAP40939 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.03□□□□□ -1.76
HADHAP40939 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC4.03□□□□□ -1.76
HADHAP40939 AC011816.2-201ENST00000607089 556 ntBASIC4.03□□□□□ -1.76
HADHAP40939 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC4.03□□□□□ -1.76
HADHAP40939 MIR486-1-201ENST00000612171 68 ntBASIC4.03□□□□□ -1.76
HADHAP40939 AC021755.4-201ENST00000616620 456 ntBASIC4.03□□□□□ -1.76
HADHAP40939 AP000676.4-201ENST00000624659 623 ntBASIC4.03□□□□□ -1.76
HADHAP40939 AC091925.2-201ENST00000625059 256 ntBASIC4.03□□□□□ -1.76
HADHAP40939 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.03□□□□□ -1.76
HADHAP40939 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.03□□□□□ -1.76
HADHAP40939 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.03□□□□□ -1.77
HADHAP40939 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
HADHAP40939 FAM35DP-201ENST00000323387 2712 ntBASIC4.02□□□□□ -1.77
HADHAP40939 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC4.02□□□□□ -1.77
HADHAP40939 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
HADHAP40939 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
HADHAP40939 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC4.02□□□□□ -1.77
HADHAP40939 RNU6-931P-201ENST00000363850 107 ntBASIC4.02□□□□□ -1.77
HADHAP40939 RNU1-89P-201ENST00000384592 164 ntBASIC4.02□□□□□ -1.77
HADHAP40939 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
HADHAP40939 AL138878.1-201ENST00000405131 347 ntBASIC4.02□□□□□ -1.77
HADHAP40939 PPIAP31-201ENST00000405422 495 ntBASIC4.02□□□□□ -1.77
HADHAP40939 AL445189.1-201ENST00000405722 338 ntBASIC4.02□□□□□ -1.77
HADHAP40939 RNU6-757P-201ENST00000410334 100 ntBASIC4.02□□□□□ -1.77
HADHAP40939 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC4.02□□□□□ -1.77
HADHAP40939 TPMTP2-201ENST00000414372 726 ntBASIC4.02□□□□□ -1.77
HADHAP40939 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC4.02□□□□□ -1.77
HADHAP40939 ZNF736P2Y-201ENST00000416040 1279 ntBASIC4.02□□□□□ -1.77
HADHAP40939 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC4.02□□□□□ -1.77
HADHAP40939 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC4.02□□□□□ -1.77
HADHAP40939 OR4C10P-201ENST00000434991 931 ntBASIC4.02□□□□□ -1.77
HADHAP40939 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC4.02□□□□□ -1.77
HADHAP40939 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC4.02□□□□□ -1.77
HADHAP40939 HMGB1P12-201ENST00000438594 598 ntBASIC4.02□□□□□ -1.77
HADHAP40939 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC4.02□□□□□ -1.77
HADHAP40939 Z95327.1-201ENST00000446082 482 ntBASIC4.02□□□□□ -1.77
HADHAP40939 AC007537.2-201ENST00000472093 511 ntBASIC4.02□□□□□ -1.77
HADHAP40939 ST13P14-201ENST00000474095 734 ntBASIC4.02□□□□□ -1.77
HADHAP40939 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC4.02□□□□□ -1.77
HADHAP40939 ACTR3BP4-201ENST00000503033 1244 ntBASIC4.02□□□□□ -1.77
HADHAP40939 AC006390.1-201ENST00000508068 283 ntBASIC4.02□□□□□ -1.77
HADHAP40939 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC4.02□□□□□ -1.77
HADHAP40939 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
HADHAP40939 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC4.02□□□□□ -1.77
HADHAP40939 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC4.02□□□□□ -1.77
HADHAP40939 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC4.02□□□□□ -1.77
HADHAP40939 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC4.02□□□□□ -1.77
HADHAP40939 MIR3690-201ENST00000580266 75 ntBASIC4.02□□□□□ -1.77
HADHAP40939 SNORD84-203ENST00000584275 78 ntBASIC4.02□□□□□ -1.77
HADHAP40939 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC4.02□□□□□ -1.77
HADHAP40939 AC110741.2-201ENST00000605278 268 ntBASIC4.02□□□□□ -1.77
HADHAP40939 AL139089.1-201ENST00000620372 975 ntBASIC4.02□□□□□ -1.77
HADHAP40939 AP000770.2-201ENST00000623694 100 ntBASIC4.02□□□□□ -1.77
HADHAP40939 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC4.02□□□□□ -1.77
HADHAP40939 TEX41-265ENST00000627785 704 ntTSL 5 BASIC4.02□□□□□ -1.77
HADHAP40939 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
HADHAP40939 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
HADHAP40939 ANKRD62P1-201ENST00000434304 1623 ntBASIC4.02□□□□□ -1.77
HADHAP40939 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.02□□□□□ -1.77
HADHAP40939 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
HADHAP40939 AP001350.1-201ENST00000601906 1524 ntBASIC4.01□□□□□ -1.77
HADHAP40939 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
HADHAP40939 HSPA8P1-201ENST00000425843 1833 ntBASIC4.01□□□□□ -1.77
HADHAP40939 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
HADHAP40939 CRP-202ENST00000368110 667 ntTSL 3 BASIC4.01□□□□□ -1.77
HADHAP40939 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
HADHAP40939 AL031679.1-201ENST00000400616 525 ntBASIC4.01□□□□□ -1.77
HADHAP40939 RNU6-628P-201ENST00000410675 107 ntBASIC4.01□□□□□ -1.77
HADHAP40939 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
HADHAP40939 MUPP-201ENST00000438111 566 ntBASIC4.01□□□□□ -1.77
HADHAP40939 SNRPEP7-201ENST00000438350 220 ntBASIC4.01□□□□□ -1.77
HADHAP40939 HMGB1P37-201ENST00000439613 609 ntBASIC4.01□□□□□ -1.77
HADHAP40939 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC4.01□□□□□ -1.77
HADHAP40939 AL500522.2-201ENST00000448562 343 ntBASIC4.01□□□□□ -1.77
HADHAP40939 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.01□□□□□ -1.77
HADHAP40939 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC4.01□□□□□ -1.77
HADHAP40939 VN1R17P-201ENST00000472048 1090 ntBASIC4.01□□□□□ -1.77
HADHAP40939 RPS3AP6-201ENST00000484430 795 ntBASIC4.01□□□□□ -1.77
HADHAP40939 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC4.01□□□□□ -1.77
HADHAP40939 AC026726.1-201ENST00000512859 601 ntBASIC4.01□□□□□ -1.77
HADHAP40939 AC010342.1-201ENST00000514047 877 ntBASIC4.01□□□□□ -1.77
HADHAP40939 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC4.01□□□□□ -1.77
HADHAP40939 SNORA3.4-201ENST00000515969 96 ntBASIC4.01□□□□□ -1.77
HADHAP40939 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC4.01□□□□□ -1.77
HADHAP40939 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.01□□□□□ -1.77
HADHAP40939 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC4.01□□□□□ -1.77
HADHAP40939 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC4.01□□□□□ -1.77
HADHAP40939 OR4P1P-201ENST00000530808 1136 ntBASIC4.01□□□□□ -1.77
HADHAP40939 AC018630.1-201ENST00000541376 925 ntBASIC4.01□□□□□ -1.77
HADHAP40939 AC091515.1-201ENST00000548110 679 ntBASIC4.01□□□□□ -1.77
HADHAP40939 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC4.01□□□□□ -1.77
HADHAP40939 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC4.01□□□□□ -1.77
HADHAP40939 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC4.01□□□□□ -1.77
HADHAP40939 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 91.7 ms