Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 RNA5SP295-201ENST00000362655 121 ntBASIC3.01□□□□□ -1.93
RFC3P40938 RNA5SP383-201ENST00000362934 120 ntBASIC3.01□□□□□ -1.93
RFC3P40938 RNU6-792P-201ENST00000363490 107 ntBASIC3.01□□□□□ -1.93
RFC3P40938 RNU6-650P-201ENST00000365658 111 ntBASIC3.01□□□□□ -1.93
RFC3P40938 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC3.01□□□□□ -1.93
RFC3P40938 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC3.01□□□□□ -1.93
RFC3P40938 RPL23AP47-201ENST00000408017 460 ntBASIC3.01□□□□□ -1.93
RFC3P40938 AL024507.1-201ENST00000412741 274 ntBASIC3.01□□□□□ -1.93
RFC3P40938 OR4K6P-201ENST00000416478 897 ntBASIC3.01□□□□□ -1.93
RFC3P40938 AL009174.1-201ENST00000426577 416 ntBASIC3.01□□□□□ -1.93
RFC3P40938 AC096632.1-201ENST00000427395 310 ntBASIC3.01□□□□□ -1.93
RFC3P40938 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC3.01□□□□□ -1.93
RFC3P40938 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.01□□□□□ -1.93
RFC3P40938 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.01□□□□□ -1.93
RFC3P40938 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.01□□□□□ -1.93
RFC3P40938 AL024509.2-201ENST00000493462 493 ntBASIC3.01□□□□□ -1.93
RFC3P40938 AC020893.1-201ENST00000502452 580 ntBASIC3.01□□□□□ -1.93
RFC3P40938 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.01□□□□□ -1.93
RFC3P40938 RNU6-1102P-201ENST00000516149 96 ntBASIC3.01□□□□□ -1.93
RFC3P40938 AC124293.1-201ENST00000530034 493 ntBASIC3.01□□□□□ -1.93
RFC3P40938 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.01□□□□□ -1.93
RFC3P40938 AC106782.4-201ENST00000568264 210 ntBASIC3.01□□□□□ -1.93
RFC3P40938 AC015917.1-201ENST00000579654 510 ntBASIC3.01□□□□□ -1.93
RFC3P40938 AL669831.4-202ENST00000590817 238 ntBASIC3.01□□□□□ -1.93
RFC3P40938 AC103881.1-201ENST00000603476 538 ntBASIC3.01□□□□□ -1.93
RFC3P40938 HSPE1P14-201ENST00000605812 302 ntBASIC3.01□□□□□ -1.93
RFC3P40938 AC245100.7-201ENST00000609678 442 ntBASIC3.01□□□□□ -1.93
RFC3P40938 AC009464.1-201ENST00000615731 469 ntBASIC3.01□□□□□ -1.93
RFC3P40938 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.01□□□□□ -1.93
RFC3P40938 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
RFC3P40938 MFSD8-233ENST00000641482 4860 ntBASIC3.01□□□□□ -1.93
RFC3P40938 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC3□□□□□ -1.93
RFC3P40938 MTND4P34-201ENST00000572715 1371 ntBASIC3□□□□□ -1.93
RFC3P40938 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3□□□□□ -1.93
RFC3P40938 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3□□□□□ -1.93
RFC3P40938 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
RFC3P40938 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
RFC3P40938 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3□□□□□ -1.93
RFC3P40938 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3□□□□□ -1.93
RFC3P40938 RNU1-70P-201ENST00000362618 164 ntBASIC3□□□□□ -1.93
RFC3P40938 RNU6-263P-201ENST00000363811 107 ntBASIC3□□□□□ -1.93
RFC3P40938 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
RFC3P40938 Y_RNA.493-201ENST00000384422 102 ntBASIC3□□□□□ -1.93
RFC3P40938 RN7SKP111-201ENST00000410349 271 ntBASIC3□□□□□ -1.93
RFC3P40938 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC3□□□□□ -1.93
RFC3P40938 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3□□□□□ -1.93
RFC3P40938 AL158050.1-201ENST00000416077 457 ntBASIC3□□□□□ -1.93
RFC3P40938 AC008173.1-201ENST00000418901 264 ntBASIC3□□□□□ -1.93
RFC3P40938 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3□□□□□ -1.93
RFC3P40938 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3□□□□□ -1.93
RFC3P40938 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3□□□□□ -1.93
RFC3P40938 AL353678.1-201ENST00000422735 741 ntBASIC3□□□□□ -1.93
RFC3P40938 RPP40P1-201ENST00000426762 456 ntBASIC3□□□□□ -1.93
RFC3P40938 DPPA2P1-201ENST00000428060 556 ntBASIC3□□□□□ -1.93
RFC3P40938 AC073508.1-201ENST00000428866 656 ntBASIC3□□□□□ -1.93
RFC3P40938 RPS7P2-201ENST00000435134 607 ntBASIC3□□□□□ -1.93
RFC3P40938 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC3□□□□□ -1.93
RFC3P40938 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3□□□□□ -1.93
RFC3P40938 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC3□□□□□ -1.93
RFC3P40938 AC008264.1-201ENST00000447612 367 ntBASIC3□□□□□ -1.93
RFC3P40938 AL500527.1-201ENST00000448532 255 ntBASIC3□□□□□ -1.93
RFC3P40938 MTND2P30-201ENST00000456663 382 ntBASIC3□□□□□ -1.93
RFC3P40938 RPS29P2-201ENST00000479278 136 ntBASIC3□□□□□ -1.93
RFC3P40938 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3□□□□□ -1.93
RFC3P40938 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC3□□□□□ -1.93
RFC3P40938 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3□□□□□ -1.93
RFC3P40938 RNU6-416P-201ENST00000516265 103 ntBASIC3□□□□□ -1.93
RFC3P40938 SNORA64.4-201ENST00000516632 81 ntBASIC3□□□□□ -1.93
RFC3P40938 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3□□□□□ -1.93
RFC3P40938 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC3□□□□□ -1.93
RFC3P40938 OSBPL9P3-201ENST00000534523 595 ntBASIC3□□□□□ -1.93
RFC3P40938 HIGD1AP1-201ENST00000550979 275 ntBASIC3□□□□□ -1.93
RFC3P40938 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3□□□□□ -1.93
RFC3P40938 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3□□□□□ -1.93
RFC3P40938 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC3□□□□□ -1.93
RFC3P40938 RPL21P12-201ENST00000559810 515 ntBASIC3□□□□□ -1.93
RFC3P40938 AC011471.1-201ENST00000585766 187 ntBASIC3□□□□□ -1.93
RFC3P40938 AC105227.2-201ENST00000615075 605 ntBASIC3□□□□□ -1.93
RFC3P40938 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC3□□□□□ -1.93
RFC3P40938 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC3□□□□□ -1.93
RFC3P40938 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3□□□□□ -1.93
RFC3P40938 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC3□□□□□ -1.93
RFC3P40938 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3□□□□□ -1.93
RFC3P40938 AL353743.1-202ENST00000431724 1695 ntBASIC3□□□□□ -1.93
RFC3P40938 AC117529.2-201ENST00000512159 2068 ntBASIC3□□□□□ -1.93
RFC3P40938 AC008264.2-201ENST00000610193 3731 ntBASIC3□□□□□ -1.93
RFC3P40938 AL356274.2-201ENST00000624379 3752 ntBASIC3□□□□□ -1.93
RFC3P40938 MTND5P7-201ENST00000413558 1798 ntBASIC3□□□□□ -1.93
RFC3P40938 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
RFC3P40938 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC2.99□□□□□ -1.93
RFC3P40938 CR383658.2-201ENST00000547576 1525 ntBASIC2.99□□□□□ -1.93
RFC3P40938 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
RFC3P40938 RNU6-339P-201ENST00000384310 107 ntBASIC2.99□□□□□ -1.93
RFC3P40938 SNORA48.5-201ENST00000391143 135 ntBASIC2.99□□□□□ -1.93
RFC3P40938 RPL31P1-201ENST00000398116 372 ntBASIC2.99□□□□□ -1.93
RFC3P40938 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC2.99□□□□□ -1.93
RFC3P40938 RN7SKP123-201ENST00000410732 291 ntBASIC2.99□□□□□ -1.93
RFC3P40938 RNU4-27P-201ENST00000410889 139 ntBASIC2.99□□□□□ -1.93
RFC3P40938 AL357078.2-201ENST00000416486 427 ntBASIC2.99□□□□□ -1.93
RFC3P40938 AL356968.1-201ENST00000416622 474 ntBASIC2.99□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 136.9 ms