Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CIITAP33076 AP001189.2-201ENST00000527320 189 ntBASIC4.4□□□□□ -1.71
CIITAP33076 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC4.4□□□□□ -1.71
CIITAP33076 AC012435.1-202ENST00000568772 240 ntBASIC4.4□□□□□ -1.71
CIITAP33076 AC012213.3-201ENST00000577199 777 ntBASIC4.4□□□□□ -1.71
CIITAP33076 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
CIITAP33076 RNU6-156P-201ENST00000621869 107 ntBASIC4.4□□□□□ -1.71
CIITAP33076 AC120349.2-201ENST00000625002 298 ntBASIC4.4□□□□□ -1.71
CIITAP33076 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC4.4□□□□□ -1.71
CIITAP33076 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC4.4□□□□□ -1.71
CIITAP33076 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
CIITAP33076 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.71
CIITAP33076 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.4□□□□□ -1.71
CIITAP33076 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC4.4□□□□□ -1.71
CIITAP33076 UBE3AP2-201ENST00000429033 2259 ntBASIC4.39□□□□□ -1.71
CIITAP33076 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
CIITAP33076 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CIITAP33076 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CIITAP33076 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CIITAP33076 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CIITAP33076 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
CIITAP33076 RNU6-251P-201ENST00000363235 104 ntBASIC4.39□□□□□ -1.71
CIITAP33076 RNU1-64P-201ENST00000365443 163 ntBASIC4.39□□□□□ -1.71
CIITAP33076 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CIITAP33076 RNU6-356P-201ENST00000384140 107 ntBASIC4.39□□□□□ -1.71
CIITAP33076 SNORA70E-201ENST00000384492 135 ntBASIC4.39□□□□□ -1.71
CIITAP33076 DSTNP4-201ENST00000399472 474 ntBASIC4.39□□□□□ -1.71
CIITAP33076 AL445189.1-201ENST00000405722 338 ntBASIC4.39□□□□□ -1.71
CIITAP33076 Y_RNA.599-201ENST00000410489 109 ntBASIC4.39□□□□□ -1.71
CIITAP33076 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
CIITAP33076 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC4.39□□□□□ -1.71
CIITAP33076 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC4.39□□□□□ -1.71
CIITAP33076 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC4.39□□□□□ -1.71
CIITAP33076 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC4.39□□□□□ -1.71
CIITAP33076 AL353748.1-201ENST00000440753 474 ntBASIC4.39□□□□□ -1.71
CIITAP33076 RPS15AP1-201ENST00000457423 391 ntBASIC4.39□□□□□ -1.71
CIITAP33076 snoU13.7-201ENST00000459220 104 ntBASIC4.39□□□□□ -1.71
CIITAP33076 AP000893.1-201ENST00000474462 794 ntBASIC4.39□□□□□ -1.71
CIITAP33076 S100A11P1-201ENST00000477525 312 ntBASIC4.39□□□□□ -1.71
CIITAP33076 AC068724.1-201ENST00000487100 792 ntBASIC4.39□□□□□ -1.71
CIITAP33076 RN7SL323P-201ENST00000494712 295 ntBASIC4.39□□□□□ -1.71
CIITAP33076 SETP14-201ENST00000497538 873 ntBASIC4.39□□□□□ -1.71
CIITAP33076 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC4.39□□□□□ -1.71
CIITAP33076 AC022447.1-201ENST00000515358 464 ntBASIC4.39□□□□□ -1.71
CIITAP33076 AC008802.1-201ENST00000519121 791 ntBASIC4.39□□□□□ -1.71
CIITAP33076 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC4.39□□□□□ -1.71
CIITAP33076 OR4A12P-201ENST00000530847 918 ntBASIC4.39□□□□□ -1.71
CIITAP33076 RFPL1S-203ENST00000539579 330 ntBASIC4.39□□□□□ -1.71
CIITAP33076 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC4.39□□□□□ -1.71
CIITAP33076 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC4.39□□□□□ -1.71
CIITAP33076 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC4.39□□□□□ -1.71
CIITAP33076 AC012414.6-201ENST00000568241 401 ntBASIC4.39□□□□□ -1.71
CIITAP33076 MIR5685-201ENST00000579080 79 ntBASIC4.39□□□□□ -1.71
CIITAP33076 VN1R92P-201ENST00000598511 928 ntBASIC4.39□□□□□ -1.71
CIITAP33076 AC073544.2-201ENST00000601155 540 ntBASIC4.39□□□□□ -1.71
CIITAP33076 AC004987.4-201ENST00000603383 338 ntBASIC4.39□□□□□ -1.71
CIITAP33076 AC069304.2-201ENST00000605154 435 ntBASIC4.39□□□□□ -1.71
CIITAP33076 AL109618.2-201ENST00000605527 211 ntBASIC4.39□□□□□ -1.71
CIITAP33076 AL354760.1-201ENST00000608357 643 ntBASIC4.39□□□□□ -1.71
CIITAP33076 AC245297.2-201ENST00000610119 565 ntBASIC4.39□□□□□ -1.71
CIITAP33076 AC026368.1-201ENST00000614934 690 ntBASIC4.39□□□□□ -1.71
CIITAP33076 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
CIITAP33076 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4.39□□□□□ -1.71
CIITAP33076 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC4.39□□□□□ -1.71
CIITAP33076 AC092192.1-201ENST00000633154 1018 ntBASIC4.39□□□□□ -1.71
CIITAP33076 AC026634.1-201ENST00000634369 198 ntBASIC4.39□□□□□ -1.71
CIITAP33076 AC099063.3-201ENST00000642066 185 ntBASIC4.39□□□□□ -1.71
CIITAP33076 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CIITAP33076 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.39□□□□□ -1.71
CIITAP33076 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.39□□□□□ -1.71
CIITAP33076 DBF4P1-201ENST00000412976 1892 ntBASIC4.39□□□□□ -1.71
CIITAP33076 IPO8P1-201ENST00000455509 3109 ntBASIC4.39□□□□□ -1.71
CIITAP33076 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
CIITAP33076 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.38□□□□□ -1.71
CIITAP33076 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CIITAP33076 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CIITAP33076 ZNF962P-201ENST00000443465 3140 ntBASIC4.38□□□□□ -1.71
CIITAP33076 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CIITAP33076 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.38□□□□□ -1.71
CIITAP33076 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
CIITAP33076 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
CIITAP33076 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CIITAP33076 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CIITAP33076 AC016716.1-201ENST00000265882 708 ntBASIC4.38□□□□□ -1.71
CIITAP33076 SNORD74.4-201ENST00000364129 80 ntBASIC4.38□□□□□ -1.71
CIITAP33076 U3.15-201ENST00000365398 212 ntBASIC4.38□□□□□ -1.71
CIITAP33076 RNU6-444P-201ENST00000383988 108 ntBASIC4.38□□□□□ -1.71
CIITAP33076 MIR30B-201ENST00000384850 88 ntBASIC4.38□□□□□ -1.71
CIITAP33076 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
CIITAP33076 RPL23AP29-201ENST00000397284 453 ntBASIC4.38□□□□□ -1.71
CIITAP33076 RNU2-21P-201ENST00000410368 188 ntBASIC4.38□□□□□ -1.71
CIITAP33076 AC004987.3-201ENST00000413879 771 ntBASIC4.38□□□□□ -1.71
CIITAP33076 RPL36AP36-201ENST00000418616 301 ntBASIC4.38□□□□□ -1.71
CIITAP33076 AC008280.1-201ENST00000418851 412 ntBASIC4.38□□□□□ -1.71
CIITAP33076 Z99497.1-201ENST00000421282 135 ntBASIC4.38□□□□□ -1.71
CIITAP33076 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC4.38□□□□□ -1.71
CIITAP33076 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC4.38□□□□□ -1.71
CIITAP33076 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC4.38□□□□□ -1.71
CIITAP33076 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC4.38□□□□□ -1.71
CIITAP33076 TRIM60P18-201ENST00000441518 828 ntBASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 134.5 ms