Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 AL356292.1-201ENST00000283110 373 ntBASIC3.47□□□□□ -1.85
CPS1P31327 AC011816.1-201ENST00000441346 546 ntBASIC3.47□□□□□ -1.85
CPS1P31327 RNU6ATAC39P-201ENST00000516309 149 ntBASIC3.47□□□□□ -1.85
CPS1P31327 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC3.47□□□□□ -1.85
CPS1P31327 AC078814.3-201ENST00000553036 491 ntBASIC3.47□□□□□ -1.85
CPS1P31327 AC055876.1-202ENST00000567053 138 ntBASIC3.47□□□□□ -1.85
CPS1P31327 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC3.47□□□□□ -1.85
CPS1P31327 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3.47□□□□□ -1.85
CPS1P31327 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
CPS1P31327 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
CPS1P31327 ZNF542P-204ENST00000482727 1305 ntBASIC3.47□□□□□ -1.85
CPS1P31327 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
CPS1P31327 MIR489-201ENST00000384923 84 ntBASIC3.46□□□□□ -1.86
CPS1P31327 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.46□□□□□ -1.86
CPS1P31327 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
CPS1P31327 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC3.46□□□□□ -1.86
CPS1P31327 AC126182.1-201ENST00000478134 357 ntBASIC3.46□□□□□ -1.86
CPS1P31327 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.46□□□□□ -1.86
CPS1P31327 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC3.46□□□□□ -1.86
CPS1P31327 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
CPS1P31327 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC3.46□□□□□ -1.86
CPS1P31327 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC3.46□□□□□ -1.86
CPS1P31327 MIR8070-201ENST00000616510 88 ntBASIC3.46□□□□□ -1.86
CPS1P31327 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.46□□□□□ -1.86
CPS1P31327 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
CPS1P31327 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.46□□□□□ -1.86
CPS1P31327 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
CPS1P31327 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC3.45□□□□□ -1.86
CPS1P31327 U8.13-201ENST00000390842 128 ntBASIC3.45□□□□□ -1.86
CPS1P31327 HSPD1P16-201ENST00000402302 394 ntBASIC3.45□□□□□ -1.86
CPS1P31327 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC3.45□□□□□ -1.86
CPS1P31327 MTCYBP14-201ENST00000457471 715 ntBASIC3.45□□□□□ -1.86
CPS1P31327 AC091179.1-201ENST00000461606 579 ntBASIC3.45□□□□□ -1.86
CPS1P31327 RPL23AP45-201ENST00000476406 468 ntBASIC3.45□□□□□ -1.86
CPS1P31327 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.45□□□□□ -1.86
CPS1P31327 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC3.45□□□□□ -1.86
CPS1P31327 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC3.45□□□□□ -1.86
CPS1P31327 SCARNA17.1-201ENST00000516211 143 ntBASIC3.45□□□□□ -1.86
CPS1P31327 SCARNA17.2-201ENST00000516334 143 ntBASIC3.45□□□□□ -1.86
CPS1P31327 RPL23AP84-201ENST00000571193 464 ntBASIC3.45□□□□□ -1.86
CPS1P31327 snoU13.31-201ENST00000607291 104 ntBASIC3.45□□□□□ -1.86
CPS1P31327 AL450489.1-201ENST00000612071 468 ntBASIC3.45□□□□□ -1.86
CPS1P31327 SCARNA17.4-201ENST00000614296 143 ntBASIC3.45□□□□□ -1.86
CPS1P31327 MIR6873-201ENST00000622788 63 ntBASIC3.45□□□□□ -1.86
CPS1P31327 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.45□□□□□ -1.86
CPS1P31327 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.45□□□□□ -1.86
CPS1P31327 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
CPS1P31327 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
CPS1P31327 SNORA80E-201ENST00000384744 137 ntBASIC3.44□□□□□ -1.86
CPS1P31327 RANP7-201ENST00000418085 644 ntBASIC3.44□□□□□ -1.86
CPS1P31327 GOLGA5P1-201ENST00000507317 980 ntBASIC3.44□□□□□ -1.86
CPS1P31327 USP9YP5-201ENST00000511770 630 ntBASIC3.44□□□□□ -1.86
CPS1P31327 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC3.44□□□□□ -1.86
CPS1P31327 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC3.44□□□□□ -1.86
CPS1P31327 AL389895.1-201ENST00000554127 252 ntBASIC3.44□□□□□ -1.86
CPS1P31327 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC3.44□□□□□ -1.86
CPS1P31327 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.44□□□□□ -1.86
CPS1P31327 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.44□□□□□ -1.86
CPS1P31327 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
CPS1P31327 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CPS1P31327 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
CPS1P31327 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC3.44□□□□□ -1.86
CPS1P31327 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
CPS1P31327 MTCO3P31-201ENST00000405526 789 ntBASIC3.44□□□□□ -1.86
CPS1P31327 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.44□□□□□ -1.86
CPS1P31327 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC3.44□□□□□ -1.86
CPS1P31327 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC3.44□□□□□ -1.86
CPS1P31327 AL356806.1-201ENST00000422524 916 ntBASIC3.44□□□□□ -1.86
CPS1P31327 SETP10-201ENST00000424368 814 ntBASIC3.44□□□□□ -1.86
CPS1P31327 AL353729.1-201ENST00000425044 720 ntBASIC3.44□□□□□ -1.86
CPS1P31327 RN7SL297P-201ENST00000483161 293 ntBASIC3.44□□□□□ -1.86
CPS1P31327 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.44□□□□□ -1.86
CPS1P31327 SNORA31.1-201ENST00000515993 133 ntBASIC3.44□□□□□ -1.86
CPS1P31327 SNORA31.5-201ENST00000516190 133 ntBASIC3.44□□□□□ -1.86
CPS1P31327 AP001207.1-201ENST00000524051 481 ntBASIC3.44□□□□□ -1.86
CPS1P31327 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
CPS1P31327 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
CPS1P31327 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.43□□□□□ -1.86
CPS1P31327 AC116158.1-201ENST00000560231 2129 ntBASIC3.43□□□□□ -1.86
CPS1P31327 Z73965.1-201ENST00000623412 2297 ntBASIC3.43□□□□□ -1.86
CPS1P31327 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC3.43□□□□□ -1.86
CPS1P31327 RNU1-91P-201ENST00000364746 163 ntBASIC3.43□□□□□ -1.86
CPS1P31327 RNU6-321P-201ENST00000410912 106 ntBASIC3.43□□□□□ -1.86
CPS1P31327 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC3.43□□□□□ -1.86
CPS1P31327 AC013410.1-201ENST00000436223 1232 ntBASIC3.43□□□□□ -1.86
CPS1P31327 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC3.43□□□□□ -1.86
CPS1P31327 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC3.43□□□□□ -1.86
CPS1P31327 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC3.43□□□□□ -1.86
CPS1P31327 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC3.43□□□□□ -1.86
CPS1P31327 AC104090.1-201ENST00000506341 1171 ntBASIC3.43□□□□□ -1.86
CPS1P31327 RNU6-295P-201ENST00000516901 104 ntBASIC3.43□□□□□ -1.86
CPS1P31327 AC021269.2-201ENST00000532318 330 ntBASIC3.43□□□□□ -1.86
CPS1P31327 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC3.43□□□□□ -1.86
CPS1P31327 FRG1DP-201ENST00000635586 771 ntBASIC3.43□□□□□ -1.86
CPS1P31327 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
CPS1P31327 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
CPS1P31327 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.42□□□□□ -1.86
CPS1P31327 Z98742.2-201ENST00000431564 187 ntBASIC3.42□□□□□ -1.86
CPS1P31327 RPL23AP74-201ENST00000437246 471 ntBASIC3.42□□□□□ -1.86
CPS1P31327 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC3.42□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 115.8 ms