Protein–RNA interactions for Protein: P28370

SMARCA1, Probable global transcription activator SNF2L1, humanhuman

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1P28370 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.85□□□□□ -1.63
SMARCA1P28370 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4.85□□□□□ -1.63
SMARCA1P28370 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC4.85□□□□□ -1.63
SMARCA1P28370 RPL23AP46-201ENST00000438548 490 ntBASIC4.85□□□□□ -1.63
SMARCA1P28370 LSM1P1-201ENST00000438629 273 ntBASIC4.85□□□□□ -1.63
SMARCA1P28370 AL031667.1-201ENST00000440222 725 ntBASIC4.85□□□□□ -1.63
SMARCA1P28370 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC4.85□□□□□ -1.63
SMARCA1P28370 NDUFS5P3-201ENST00000450668 321 ntBASIC4.85□□□□□ -1.63
SMARCA1P28370 BX276092.4-201ENST00000452056 248 ntBASIC4.85□□□□□ -1.63
SMARCA1P28370 RAD23BP3-201ENST00000454157 1152 ntBASIC4.85□□□□□ -1.63
SMARCA1P28370 DNAJC19P1-201ENST00000455312 319 ntBASIC4.85□□□□□ -1.63
SMARCA1P28370 AL136126.1-201ENST00000473603 402 ntBASIC4.85□□□□□ -1.63
SMARCA1P28370 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.85□□□□□ -1.63
SMARCA1P28370 AC093267.1-201ENST00000489176 961 ntBASIC4.85□□□□□ -1.63
SMARCA1P28370 PDLIM1P4-201ENST00000504327 1006 ntBASIC4.85□□□□□ -1.63
SMARCA1P28370 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC4.85□□□□□ -1.63
SMARCA1P28370 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC4.85□□□□□ -1.63
SMARCA1P28370 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SMARCA1P28370 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SMARCA1P28370 MRPL49P2-201ENST00000521066 465 ntBASIC4.85□□□□□ -1.63
SMARCA1P28370 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SMARCA1P28370 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SMARCA1P28370 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC4.85□□□□□ -1.63
SMARCA1P28370 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.85□□□□□ -1.63
SMARCA1P28370 AC063950.1-201ENST00000552036 308 ntBASIC4.85□□□□□ -1.63
SMARCA1P28370 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC4.85□□□□□ -1.63
SMARCA1P28370 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC4.85□□□□□ -1.63
SMARCA1P28370 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC4.85□□□□□ -1.63
SMARCA1P28370 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC4.85□□□□□ -1.63
SMARCA1P28370 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC4.85□□□□□ -1.63
SMARCA1P28370 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.85□□□□□ -1.63
SMARCA1P28370 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
SMARCA1P28370 MIR432-201ENST00000606207 94 ntBASIC4.85□□□□□ -1.63
SMARCA1P28370 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC4.85□□□□□ -1.63
SMARCA1P28370 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.85□□□□□ -1.63
SMARCA1P28370 AC027807.2-201ENST00000616099 408 ntBASIC4.85□□□□□ -1.63
SMARCA1P28370 SNX18P1Y-201ENST00000616231 511 ntBASIC4.85□□□□□ -1.63
SMARCA1P28370 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.85□□□□□ -1.63
SMARCA1P28370 AC068722.2-201ENST00000618734 544 ntBASIC4.85□□□□□ -1.63
SMARCA1P28370 AL731566.2-201ENST00000618971 317 ntBASIC4.85□□□□□ -1.63
SMARCA1P28370 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
SMARCA1P28370 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SMARCA1P28370 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC4.85□□□□□ -1.63
SMARCA1P28370 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
SMARCA1P28370 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.85□□□□□ -1.63
SMARCA1P28370 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.85□□□□□ -1.63
SMARCA1P28370 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.85□□□□□ -1.63
SMARCA1P28370 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
SMARCA1P28370 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
SMARCA1P28370 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.84□□□□□ -1.63
SMARCA1P28370 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.63
SMARCA1P28370 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.63
SMARCA1P28370 Y_RNA.41-201ENST00000362646 102 ntBASIC4.84□□□□□ -1.63
SMARCA1P28370 RNU6-1226P-201ENST00000384317 107 ntBASIC4.84□□□□□ -1.63
SMARCA1P28370 RNU6-348P-201ENST00000384386 107 ntBASIC4.84□□□□□ -1.63
SMARCA1P28370 RNU6-952P-201ENST00000391164 108 ntBASIC4.84□□□□□ -1.63
SMARCA1P28370 AC025750.1-201ENST00000399891 379 ntBASIC4.84□□□□□ -1.63
SMARCA1P28370 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC4.84□□□□□ -1.63
SMARCA1P28370 RPS27AP14-201ENST00000422868 454 ntBASIC4.84□□□□□ -1.63
SMARCA1P28370 RPL23AP89-201ENST00000439324 255 ntBASIC4.84□□□□□ -1.63
SMARCA1P28370 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.84□□□□□ -1.63
SMARCA1P28370 MTCYBP1-201ENST00000454315 1119 ntBASIC4.84□□□□□ -1.63
SMARCA1P28370 AC026410.2-201ENST00000460281 156 ntBASIC4.84□□□□□ -1.63
SMARCA1P28370 RNF138P1-201ENST00000502765 546 ntBASIC4.84□□□□□ -1.63
SMARCA1P28370 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
SMARCA1P28370 STMN1P2-201ENST00000508435 439 ntBASIC4.84□□□□□ -1.63
SMARCA1P28370 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC4.84□□□□□ -1.63
SMARCA1P28370 AC093809.1-201ENST00000509155 340 ntBASIC4.84□□□□□ -1.63
SMARCA1P28370 VWA8P1-201ENST00000510889 176 ntBASIC4.84□□□□□ -1.63
SMARCA1P28370 AC006499.6-201ENST00000511169 607 ntBASIC4.84□□□□□ -1.63
SMARCA1P28370 AC016065.2-201ENST00000514530 444 ntBASIC4.84□□□□□ -1.63
SMARCA1P28370 MTND5P4-201ENST00000514978 288 ntBASIC4.84□□□□□ -1.63
SMARCA1P28370 AC025881.1-201ENST00000518851 512 ntBASIC4.84□□□□□ -1.63
SMARCA1P28370 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.84□□□□□ -1.63
SMARCA1P28370 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.84□□□□□ -1.63
SMARCA1P28370 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC4.84□□□□□ -1.63
SMARCA1P28370 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC4.84□□□□□ -1.63
SMARCA1P28370 AC010546.1-201ENST00000569391 485 ntBASIC4.84□□□□□ -1.63
SMARCA1P28370 ARF4P1-201ENST00000605447 541 ntBASIC4.84□□□□□ -1.63
SMARCA1P28370 AC090186.1-201ENST00000605991 572 ntBASIC4.84□□□□□ -1.63
SMARCA1P28370 AC105429.2-201ENST00000610567 517 ntBASIC4.84□□□□□ -1.63
SMARCA1P28370 AC099669.2-201ENST00000616549 437 ntBASIC4.84□□□□□ -1.63
SMARCA1P28370 AC018755.4-201ENST00000619715 454 ntBASIC4.84□□□□□ -1.63
SMARCA1P28370 AP005264.7-201ENST00000625003 745 ntBASIC4.84□□□□□ -1.63
SMARCA1P28370 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.84□□□□□ -1.64
SMARCA1P28370 AC068254.2-201ENST00000623938 3577 ntBASIC4.84□□□□□ -1.64
SMARCA1P28370 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
SMARCA1P28370 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.83□□□□□ -1.64
SMARCA1P28370 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.83□□□□□ -1.64
SMARCA1P28370 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC4.83□□□□□ -1.64
SMARCA1P28370 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
SMARCA1P28370 RNU1-108P-201ENST00000362556 161 ntBASIC4.83□□□□□ -1.64
SMARCA1P28370 NFIB-202ENST00000380924 840 ntTSL 5 BASIC4.83□□□□□ -1.64
SMARCA1P28370 RPS26P8-201ENST00000393490 348 ntBASIC4.83□□□□□ -1.64
SMARCA1P28370 SSXP10-201ENST00000402595 565 ntBASIC4.83□□□□□ -1.64
SMARCA1P28370 RPL17P12-201ENST00000413391 526 ntBASIC4.83□□□□□ -1.64
SMARCA1P28370 TPMTP2-201ENST00000414372 726 ntBASIC4.83□□□□□ -1.64
SMARCA1P28370 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC4.83□□□□□ -1.64
SMARCA1P28370 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC4.83□□□□□ -1.64
SMARCA1P28370 MTCO3P30-201ENST00000426425 670 ntBASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms