Protein–RNA interactions for Protein: P28358

HOXD10, Homeobox protein Hox-D10, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD10P28358 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
HOXD10P28358 AC092185.1-201ENST00000491371 97 ntBASIC3.69□□□□□ -1.82
HOXD10P28358 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC3.69□□□□□ -1.82
HOXD10P28358 AC027338.1-201ENST00000514840 825 ntBASIC3.69□□□□□ -1.82
HOXD10P28358 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.69□□□□□ -1.82
HOXD10P28358 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC3.69□□□□□ -1.82
HOXD10P28358 AC009812.2-201ENST00000517657 457 ntBASIC3.69□□□□□ -1.82
HOXD10P28358 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.69□□□□□ -1.82
HOXD10P28358 MTND1P36-201ENST00000522384 936 ntBASIC3.69□□□□□ -1.82
HOXD10P28358 AP003049.1-201ENST00000529418 457 ntBASIC3.69□□□□□ -1.82
HOXD10P28358 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
HOXD10P28358 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC3.69□□□□□ -1.82
HOXD10P28358 POLR2KP1-201ENST00000553226 168 ntBASIC3.69□□□□□ -1.82
HOXD10P28358 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.69□□□□□ -1.82
HOXD10P28358 AC104229.1-201ENST00000561364 255 ntBASIC3.69□□□□□ -1.82
HOXD10P28358 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC3.69□□□□□ -1.82
HOXD10P28358 AL109653.1-201ENST00000603091 248 ntBASIC3.69□□□□□ -1.82
HOXD10P28358 AL133393.1-201ENST00000603277 287 ntBASIC3.69□□□□□ -1.82
HOXD10P28358 AC244205.2-202ENST00000635781 342 ntBASIC3.69□□□□□ -1.82
HOXD10P28358 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC3.69□□□□□ -1.82
HOXD10P28358 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.69□□□□□ -1.82
HOXD10P28358 FAM35BP-202ENST00000497389 3337 ntBASIC3.69□□□□□ -1.82
HOXD10P28358 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.69□□□□□ -1.82
HOXD10P28358 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC3.69□□□□□ -1.82
HOXD10P28358 AC068647.1-201ENST00000489539 2265 ntBASIC3.69□□□□□ -1.82
HOXD10P28358 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.69□□□□□ -1.82
HOXD10P28358 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
HOXD10P28358 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
HOXD10P28358 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.68□□□□□ -1.82
HOXD10P28358 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
HOXD10P28358 AC009487.2-201ENST00000420969 6821 ntBASIC3.68□□□□□ -1.82
HOXD10P28358 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.68□□□□□ -1.82
HOXD10P28358 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
HOXD10P28358 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
HOXD10P28358 OR1S2-201ENST00000302592 978 ntBASIC3.68□□□□□ -1.82
HOXD10P28358 OR5J1P-201ENST00000313544 939 ntBASIC3.68□□□□□ -1.82
HOXD10P28358 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC3.68□□□□□ -1.82
HOXD10P28358 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
HOXD10P28358 RPS3AP26-201ENST00000398259 784 ntBASIC3.68□□□□□ -1.82
HOXD10P28358 AL121972.1-201ENST00000402023 252 ntBASIC3.68□□□□□ -1.82
HOXD10P28358 BTBD10P2-201ENST00000404779 676 ntBASIC3.68□□□□□ -1.82
HOXD10P28358 RNU2-6P-201ENST00000411404 190 ntBASIC3.68□□□□□ -1.82
HOXD10P28358 HMGB3P31-201ENST00000413333 595 ntBASIC3.68□□□□□ -1.82
HOXD10P28358 RPS15AP6-201ENST00000420703 385 ntBASIC3.68□□□□□ -1.82
HOXD10P28358 AL121882.1-201ENST00000422893 417 ntBASIC3.68□□□□□ -1.82
HOXD10P28358 RPL21P40-201ENST00000428586 483 ntBASIC3.68□□□□□ -1.82
HOXD10P28358 IFNNP1-201ENST00000429219 553 ntBASIC3.68□□□□□ -1.82
HOXD10P28358 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.68□□□□□ -1.82
HOXD10P28358 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC3.68□□□□□ -1.82
HOXD10P28358 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC3.68□□□□□ -1.82
HOXD10P28358 RNF148-202ENST00000447240 839 ntTSL 2 BASIC3.68□□□□□ -1.82
HOXD10P28358 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
HOXD10P28358 ELOCP23-201ENST00000452014 332 ntBASIC3.68□□□□□ -1.82
HOXD10P28358 MTCO3P20-201ENST00000454926 688 ntBASIC3.68□□□□□ -1.82
HOXD10P28358 AC087312.1-201ENST00000471411 480 ntBASIC3.68□□□□□ -1.82
HOXD10P28358 TRBV8-2-201ENST00000475637 270 ntBASIC3.68□□□□□ -1.82
HOXD10P28358 HMGN2P13-201ENST00000476476 274 ntBASIC3.68□□□□□ -1.82
HOXD10P28358 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC3.68□□□□□ -1.82
HOXD10P28358 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC3.68□□□□□ -1.82
HOXD10P28358 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.68□□□□□ -1.82
HOXD10P28358 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
HOXD10P28358 AC010374.2-201ENST00000512933 535 ntBASIC3.68□□□□□ -1.82
HOXD10P28358 AC008489.1-201ENST00000524271 483 ntBASIC3.68□□□□□ -1.82
HOXD10P28358 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.68□□□□□ -1.82
HOXD10P28358 LYZ-203ENST00000549690 669 ntTSL 2 BASIC3.68□□□□□ -1.82
HOXD10P28358 AC005476.1-201ENST00000554427 397 ntBASIC3.68□□□□□ -1.82
HOXD10P28358 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC3.68□□□□□ -1.82
HOXD10P28358 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC3.68□□□□□ -1.82
HOXD10P28358 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC3.68□□□□□ -1.82
HOXD10P28358 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.68□□□□□ -1.82
HOXD10P28358 AC079148.1-201ENST00000565944 819 ntBASIC3.68□□□□□ -1.82
HOXD10P28358 AC005951.1-201ENST00000576706 485 ntBASIC3.68□□□□□ -1.82
HOXD10P28358 AC012254.4-201ENST00000588843 273 ntBASIC3.68□□□□□ -1.82
HOXD10P28358 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC3.68□□□□□ -1.82
HOXD10P28358 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.68□□□□□ -1.82
HOXD10P28358 AL163051.2-201ENST00000618976 735 ntBASIC3.68□□□□□ -1.82
HOXD10P28358 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC3.68□□□□□ -1.82
HOXD10P28358 MIR622-201ENST00000638396 96 ntBASIC3.68□□□□□ -1.82
HOXD10P28358 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.68□□□□□ -1.82
HOXD10P28358 MFSD8-213ENST00000641134 1327 ntBASIC3.68□□□□□ -1.82
HOXD10P28358 NCAPGP1-201ENST00000505112 1814 ntBASIC3.67□□□□□ -1.82
HOXD10P28358 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
HOXD10P28358 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.67□□□□□ -1.82
HOXD10P28358 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
HOXD10P28358 AC017071.1-201ENST00000564407 2204 ntBASIC3.67□□□□□ -1.82
HOXD10P28358 FAM35CP-201ENST00000554755 2470 ntBASIC3.67□□□□□ -1.82
HOXD10P28358 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
HOXD10P28358 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
HOXD10P28358 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
HOXD10P28358 ATF1P1-201ENST00000406040 927 ntBASIC3.67□□□□□ -1.82
HOXD10P28358 HMGB3P18-201ENST00000406327 590 ntBASIC3.67□□□□□ -1.82
HOXD10P28358 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.67□□□□□ -1.82
HOXD10P28358 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC3.67□□□□□ -1.82
HOXD10P28358 OOSP1P1-201ENST00000423265 274 ntBASIC3.67□□□□□ -1.82
HOXD10P28358 MTCO2P1-201ENST00000424648 477 ntBASIC3.67□□□□□ -1.82
HOXD10P28358 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC3.67□□□□□ -1.82
HOXD10P28358 MOB1AP1-201ENST00000430903 535 ntBASIC3.67□□□□□ -1.82
HOXD10P28358 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.67□□□□□ -1.82
HOXD10P28358 RPS15AP1-201ENST00000457423 391 ntBASIC3.67□□□□□ -1.82
HOXD10P28358 AC010307.1-201ENST00000467206 836 ntBASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms