Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC6.16□□□□□ -1.42
VARSP26640 AL359976.1-201ENST00000418655 3528 ntBASIC6.16□□□□□ -1.42
VARSP26640 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
VARSP26640 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
VARSP26640 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC6.16□□□□□ -1.42
VARSP26640 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
VARSP26640 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
VARSP26640 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
VARSP26640 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
VARSP26640 EIF2AP4-201ENST00000424793 1781 ntBASIC6.16□□□□□ -1.42
VARSP26640 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
VARSP26640 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC6.15□□□□□ -1.42
VARSP26640 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.42
VARSP26640 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
VARSP26640 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
VARSP26640 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC6.15□□□□□ -1.42
VARSP26640 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
VARSP26640 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC6.15□□□□□ -1.42
VARSP26640 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC6.15□□□□□ -1.42
VARSP26640 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
VARSP26640 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
VARSP26640 SNORD16-201ENST00000362803 99 ntBASIC6.15□□□□□ -1.42
VARSP26640 RNU6-249P-201ENST00000363016 102 ntBASIC6.15□□□□□ -1.42
VARSP26640 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
VARSP26640 RPS4XP7-201ENST00000406274 780 ntBASIC6.15□□□□□ -1.42
VARSP26640 RN7SKP159-201ENST00000410657 292 ntBASIC6.15□□□□□ -1.42
VARSP26640 RPL21P38-201ENST00000418090 167 ntBASIC6.15□□□□□ -1.42
VARSP26640 AC234779.1-201ENST00000425910 285 ntBASIC6.15□□□□□ -1.42
VARSP26640 AL360081.1-201ENST00000428299 555 ntBASIC6.15□□□□□ -1.42
VARSP26640 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
VARSP26640 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC6.15□□□□□ -1.42
VARSP26640 COX4I1P2-201ENST00000447446 547 ntBASIC6.15□□□□□ -1.42
VARSP26640 AC092967.1-201ENST00000449016 481 ntBASIC6.15□□□□□ -1.42
VARSP26640 FABP5P13-201ENST00000452144 328 ntBASIC6.15□□□□□ -1.42
VARSP26640 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC6.15□□□□□ -1.42
VARSP26640 RPL23AP31-201ENST00000456160 467 ntBASIC6.15□□□□□ -1.42
VARSP26640 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC6.15□□□□□ -1.42
VARSP26640 RN7SL254P-201ENST00000460609 284 ntBASIC6.15□□□□□ -1.42
VARSP26640 HMGB1P21-201ENST00000502313 581 ntBASIC6.15□□□□□ -1.42
VARSP26640 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC6.15□□□□□ -1.42
VARSP26640 IGKV1OR2-1-201ENST00000514060 354 ntBASIC6.15□□□□□ -1.42
VARSP26640 AC104057.1-201ENST00000515547 497 ntBASIC6.15□□□□□ -1.42
VARSP26640 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC6.15□□□□□ -1.42
VARSP26640 HMGN1P28-201ENST00000521340 364 ntBASIC6.15□□□□□ -1.42
VARSP26640 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC6.15□□□□□ -1.42
VARSP26640 CYCSP25-201ENST00000525280 316 ntBASIC6.15□□□□□ -1.42
VARSP26640 AP003396.4-201ENST00000527574 265 ntBASIC6.15□□□□□ -1.42
VARSP26640 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC6.15□□□□□ -1.42
VARSP26640 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC6.15□□□□□ -1.42
VARSP26640 APOC2-205ENST00000592257 444 ntTSL 3 BASIC6.15□□□□□ -1.42
VARSP26640 AC063977.7-201ENST00000594454 337 ntBASIC6.15□□□□□ -1.42
VARSP26640 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC6.15□□□□□ -1.42
VARSP26640 IGKV1OR2-118-201ENST00000603238 347 ntBASIC6.15□□□□□ -1.42
VARSP26640 AC073410.2-201ENST00000603240 332 ntBASIC6.15□□□□□ -1.42
VARSP26640 RNF138P2-201ENST00000603490 592 ntBASIC6.15□□□□□ -1.42
VARSP26640 AL022394.1-201ENST00000606979 292 ntBASIC6.15□□□□□ -1.42
VARSP26640 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC6.15□□□□□ -1.42
VARSP26640 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.43
VARSP26640 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
VARSP26640 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.43
VARSP26640 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
VARSP26640 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
VARSP26640 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC6.15□□□□□ -1.43
VARSP26640 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
VARSP26640 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC6.15□□□□□ -1.43
VARSP26640 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
VARSP26640 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC6.15□□□□□ -1.43
VARSP26640 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
VARSP26640 MAPK10-338ENST00000641647 3362 ntBASIC6.15□□□□□ -1.43
VARSP26640 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC6.15□□□□□ -1.43
VARSP26640 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC6.15□□□□□ -1.43
VARSP26640 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
VARSP26640 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC6.14□□□□□ -1.43
VARSP26640 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC6.14□□□□□ -1.43
VARSP26640 AC004158.1-201ENST00000564508 4319 ntBASIC6.14□□□□□ -1.43
VARSP26640 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC6.14□□□□□ -1.43
VARSP26640 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
VARSP26640 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC6.14□□□□□ -1.43
VARSP26640 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC6.14□□□□□ -1.43
VARSP26640 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
VARSP26640 RN7SKP115-201ENST00000363177 317 ntBASIC6.14□□□□□ -1.43
VARSP26640 RNA5SP478-201ENST00000364657 115 ntBASIC6.14□□□□□ -1.43
VARSP26640 RNU6-946P-201ENST00000383878 107 ntBASIC6.14□□□□□ -1.43
VARSP26640 HMGB1P20-201ENST00000402555 677 ntBASIC6.14□□□□□ -1.43
VARSP26640 RNA5SP36-201ENST00000410197 133 ntBASIC6.14□□□□□ -1.43
VARSP26640 RNU2-15P-201ENST00000410692 191 ntBASIC6.14□□□□□ -1.43
VARSP26640 UBE2FP1-201ENST00000416536 447 ntBASIC6.14□□□□□ -1.43
VARSP26640 AL358176.3-201ENST00000420757 454 ntBASIC6.14□□□□□ -1.43
VARSP26640 RPL23AP38-201ENST00000423801 469 ntBASIC6.14□□□□□ -1.43
VARSP26640 DNAJC19P7-201ENST00000428811 344 ntBASIC6.14□□□□□ -1.43
VARSP26640 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC6.14□□□□□ -1.43
VARSP26640 NOP56P2-201ENST00000447491 769 ntBASIC6.14□□□□□ -1.43
VARSP26640 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC6.14□□□□□ -1.43
VARSP26640 AC106800.3-201ENST00000511389 308 ntBASIC6.14□□□□□ -1.43
VARSP26640 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC6.14□□□□□ -1.43
VARSP26640 snoU109.6-201ENST00000516831 118 ntBASIC6.14□□□□□ -1.43
VARSP26640 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
VARSP26640 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC6.14□□□□□ -1.43
VARSP26640 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC6.14□□□□□ -1.43
VARSP26640 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC6.14□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 87.2 ms