Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC3.8□□□□□ -1.8
PTPN3P26045 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.8□□□□□ -1.8
PTPN3P26045 AC093853.1-201ENST00000515689 483 ntBASIC3.8□□□□□ -1.8
PTPN3P26045 RN7SKP83-201ENST00000516512 178 ntBASIC3.8□□□□□ -1.8
PTPN3P26045 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC3.8□□□□□ -1.8
PTPN3P26045 AC008011.1-201ENST00000545989 227 ntBASIC3.8□□□□□ -1.8
PTPN3P26045 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC3.8□□□□□ -1.8
PTPN3P26045 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC3.8□□□□□ -1.8
PTPN3P26045 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
PTPN3P26045 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.8□□□□□ -1.8
PTPN3P26045 AC022916.3-201ENST00000592961 742 ntBASIC3.8□□□□□ -1.8
PTPN3P26045 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.8□□□□□ -1.8
PTPN3P26045 AL592221.1-201ENST00000605266 382 ntBASIC3.8□□□□□ -1.8
PTPN3P26045 AC128687.1-201ENST00000605304 619 ntBASIC3.8□□□□□ -1.8
PTPN3P26045 TUSC7.1-201ENST00000610969 165 ntBASIC3.8□□□□□ -1.8
PTPN3P26045 AC009159.2-201ENST00000617603 606 ntBASIC3.8□□□□□ -1.8
PTPN3P26045 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
PTPN3P26045 AC068831.8-201ENST00000620171 435 ntBASIC3.8□□□□□ -1.8
PTPN3P26045 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC3.8□□□□□ -1.8
PTPN3P26045 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
PTPN3P26045 AC004925.1-201ENST00000624256 2706 ntBASIC3.8□□□□□ -1.8
PTPN3P26045 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
PTPN3P26045 AL365440.1-201ENST00000436135 2167 ntBASIC3.8□□□□□ -1.8
PTPN3P26045 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
PTPN3P26045 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.8□□□□□ -1.8
PTPN3P26045 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
PTPN3P26045 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
PTPN3P26045 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.8□□□□□ -1.8
PTPN3P26045 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
PTPN3P26045 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
PTPN3P26045 AL390862.1-201ENST00000635467 1469 ntBASIC3.79□□□□□ -1.8
PTPN3P26045 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
PTPN3P26045 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
PTPN3P26045 RNA5SP258-201ENST00000362750 119 ntBASIC3.79□□□□□ -1.8
PTPN3P26045 RNU6-989P-201ENST00000362756 107 ntBASIC3.79□□□□□ -1.8
PTPN3P26045 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
PTPN3P26045 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
PTPN3P26045 TAS2R15P-201ENST00000390674 928 ntBASIC3.79□□□□□ -1.8
PTPN3P26045 SNORA57.1-201ENST00000391227 145 ntBASIC3.79□□□□□ -1.8
PTPN3P26045 TAF9BP1-201ENST00000396646 746 ntBASIC3.79□□□□□ -1.8
PTPN3P26045 RNU2-71P-201ENST00000411395 189 ntBASIC3.79□□□□□ -1.8
PTPN3P26045 RPS7P15-201ENST00000415804 584 ntBASIC3.79□□□□□ -1.8
PTPN3P26045 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC3.79□□□□□ -1.8
PTPN3P26045 PTP4A1P5-201ENST00000420305 455 ntBASIC3.79□□□□□ -1.8
PTPN3P26045 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC3.79□□□□□ -1.8
PTPN3P26045 RPL21P66-201ENST00000426566 466 ntBASIC3.79□□□□□ -1.8
PTPN3P26045 MTND1P32-201ENST00000433043 938 ntBASIC3.79□□□□□ -1.8
PTPN3P26045 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.79□□□□□ -1.8
PTPN3P26045 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC3.79□□□□□ -1.8
PTPN3P26045 NECAP1P2-201ENST00000455668 727 ntBASIC3.79□□□□□ -1.8
PTPN3P26045 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC3.79□□□□□ -1.8
PTPN3P26045 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC3.79□□□□□ -1.8
PTPN3P26045 AC021146.5-201ENST00000503544 545 ntBASIC3.79□□□□□ -1.8
PTPN3P26045 HMGB1P28-201ENST00000507778 552 ntBASIC3.79□□□□□ -1.8
PTPN3P26045 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC3.79□□□□□ -1.8
PTPN3P26045 NDUFB4P9-201ENST00000511646 388 ntBASIC3.79□□□□□ -1.8
PTPN3P26045 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC3.79□□□□□ -1.8
PTPN3P26045 AC105185.1-201ENST00000518705 535 ntBASIC3.79□□□□□ -1.8
PTPN3P26045 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC3.79□□□□□ -1.8
PTPN3P26045 AP001636.2-201ENST00000525517 696 ntBASIC3.79□□□□□ -1.8
PTPN3P26045 PDCL2P2-201ENST00000533651 189 ntBASIC3.79□□□□□ -1.8
PTPN3P26045 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC3.79□□□□□ -1.8
PTPN3P26045 DUXAP1-201ENST00000556632 463 ntBASIC3.79□□□□□ -1.8
PTPN3P26045 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC3.79□□□□□ -1.8
PTPN3P26045 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC3.79□□□□□ -1.8
PTPN3P26045 AC099489.2-201ENST00000574976 260 ntBASIC3.79□□□□□ -1.8
PTPN3P26045 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.79□□□□□ -1.8
PTPN3P26045 AL163642.2-201ENST00000604722 1019 ntBASIC3.79□□□□□ -1.8
PTPN3P26045 Z99289.3-201ENST00000605586 594 ntBASIC3.79□□□□□ -1.8
PTPN3P26045 RNU1-30P-201ENST00000606575 163 ntBASIC3.79□□□□□ -1.8
PTPN3P26045 AL590282.1-201ENST00000610379 1136 ntBASIC3.79□□□□□ -1.8
PTPN3P26045 AC012531.5-201ENST00000611375 151 ntBASIC3.79□□□□□ -1.8
PTPN3P26045 CYP3A51P-201ENST00000633513 256 ntBASIC3.79□□□□□ -1.8
PTPN3P26045 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
PTPN3P26045 MAPK10-372ENST00000641954 3413 ntBASIC3.79□□□□□ -1.8
PTPN3P26045 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
PTPN3P26045 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
PTPN3P26045 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
PTPN3P26045 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
PTPN3P26045 AC005539.1-201ENST00000443768 1479 ntBASIC3.79□□□□□ -1.8
PTPN3P26045 AP004289.2-201ENST00000444413 1457 ntBASIC3.79□□□□□ -1.8
PTPN3P26045 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
PTPN3P26045 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
PTPN3P26045 MTND4P34-201ENST00000572715 1371 ntBASIC3.78□□□□□ -1.8
PTPN3P26045 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
PTPN3P26045 CR381670.1-201ENST00000624291 1693 ntBASIC3.78□□□□□ -1.8
PTPN3P26045 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
PTPN3P26045 SNRPEP3-201ENST00000338402 276 ntBASIC3.78□□□□□ -1.8
PTPN3P26045 RNU6-1249P-201ENST00000363237 111 ntBASIC3.78□□□□□ -1.8
PTPN3P26045 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
PTPN3P26045 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC3.78□□□□□ -1.8
PTPN3P26045 AC016769.3-201ENST00000396562 315 ntBASIC3.78□□□□□ -1.8
PTPN3P26045 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
PTPN3P26045 SNRPEP2-201ENST00000397592 279 ntBASIC3.78□□□□□ -1.8
PTPN3P26045 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
PTPN3P26045 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC3.78□□□□□ -1.8
PTPN3P26045 MIR1193-201ENST00000408109 78 ntBASIC3.78□□□□□ -1.8
PTPN3P26045 AC107081.1-201ENST00000414975 361 ntBASIC3.78□□□□□ -1.8
PTPN3P26045 HMGB3P20-201ENST00000417997 600 ntBASIC3.78□□□□□ -1.8
PTPN3P26045 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 94.6 ms