Protein–RNA interactions for Protein: P23560

BDNF, Brain-derived neurotrophic factor, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BDNFP23560 PTS-202ENST00000524931 696 ntTSL 3 BASIC4.2□□□□□ -1.74
BDNFP23560 DEFB108D-201ENST00000527787 222 ntBASIC4.2□□□□□ -1.74
BDNFP23560 AC010198.2-201ENST00000550612 259 ntBASIC4.2□□□□□ -1.74
BDNFP23560 MTCYBP23-201ENST00000558717 1102 ntBASIC4.2□□□□□ -1.74
BDNFP23560 AADACP1-206ENST00000561502 1193 ntBASIC4.2□□□□□ -1.74
BDNFP23560 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC4.2□□□□□ -1.74
BDNFP23560 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC4.2□□□□□ -1.74
BDNFP23560 AC022968.1-201ENST00000567372 442 ntBASIC4.2□□□□□ -1.74
BDNFP23560 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC4.2□□□□□ -1.74
BDNFP23560 MIR3921-201ENST00000577308 85 ntBASIC4.2□□□□□ -1.74
BDNFP23560 OR4K7P-201ENST00000580232 945 ntBASIC4.2□□□□□ -1.74
BDNFP23560 AC106900.2-201ENST00000604994 317 ntBASIC4.2□□□□□ -1.74
BDNFP23560 AC009570.1-201ENST00000609599 745 ntBASIC4.2□□□□□ -1.74
BDNFP23560 AC069209.1-201ENST00000619282 651 ntBASIC4.2□□□□□ -1.74
BDNFP23560 AC011330.2-201ENST00000621680 635 ntBASIC4.2□□□□□ -1.74
BDNFP23560 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
BDNFP23560 MAPK10-253ENST00000641010 4072 ntBASIC4.2□□□□□ -1.74
BDNFP23560 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
BDNFP23560 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
BDNFP23560 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC4.19□□□□□ -1.74
BDNFP23560 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
BDNFP23560 RHOT1P2-201ENST00000366423 333 ntBASIC4.19□□□□□ -1.74
BDNFP23560 CUBN-201ENST00000377823 705 ntTSL 3 BASIC4.19□□□□□ -1.74
BDNFP23560 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
BDNFP23560 AL136310.1-201ENST00000404926 654 ntBASIC4.19□□□□□ -1.74
BDNFP23560 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.19□□□□□ -1.74
BDNFP23560 HIGD1AP4-201ENST00000430194 280 ntBASIC4.19□□□□□ -1.74
BDNFP23560 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC4.19□□□□□ -1.74
BDNFP23560 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
BDNFP23560 EEF1A1P39-201ENST00000440791 250 ntBASIC4.19□□□□□ -1.74
BDNFP23560 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.19□□□□□ -1.74
BDNFP23560 RPL18AP17-201ENST00000455326 198 ntBASIC4.19□□□□□ -1.74
BDNFP23560 AC104164.3-201ENST00000467363 1258 ntBASIC4.19□□□□□ -1.74
BDNFP23560 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
BDNFP23560 ACTG1P13-201ENST00000486987 1043 ntBASIC4.19□□□□□ -1.74
BDNFP23560 RN7SL271P-201ENST00000487601 295 ntBASIC4.19□□□□□ -1.74
BDNFP23560 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC4.19□□□□□ -1.74
BDNFP23560 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC4.19□□□□□ -1.74
BDNFP23560 AC025554.1-201ENST00000505641 188 ntBASIC4.19□□□□□ -1.74
BDNFP23560 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC4.19□□□□□ -1.74
BDNFP23560 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
BDNFP23560 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC4.19□□□□□ -1.74
BDNFP23560 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC4.19□□□□□ -1.74
BDNFP23560 XKRY-201ENST00000510392 1100 ntBASIC4.19□□□□□ -1.74
BDNFP23560 AL359273.1-201ENST00000510918 627 ntBASIC4.19□□□□□ -1.74
BDNFP23560 AC109445.1-201ENST00000512356 383 ntBASIC4.19□□□□□ -1.74
BDNFP23560 AC022483.1-201ENST00000514020 567 ntBASIC4.19□□□□□ -1.74
BDNFP23560 IGKV2-38-201ENST00000517443 247 ntBASIC4.19□□□□□ -1.74
BDNFP23560 OR5AK1P-201ENST00000524837 922 ntBASIC4.19□□□□□ -1.74
BDNFP23560 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC4.19□□□□□ -1.74
BDNFP23560 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC4.19□□□□□ -1.74
BDNFP23560 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.19□□□□□ -1.74
BDNFP23560 REXO2-218ENST00000544827 880 ntTSL 3 BASIC4.19□□□□□ -1.74
BDNFP23560 YPEL5P3-201ENST00000547227 352 ntBASIC4.19□□□□□ -1.74
BDNFP23560 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC4.19□□□□□ -1.74
BDNFP23560 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC4.19□□□□□ -1.74
BDNFP23560 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC4.19□□□□□ -1.74
BDNFP23560 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC4.19□□□□□ -1.74
BDNFP23560 AC015688.2-201ENST00000584523 262 ntBASIC4.19□□□□□ -1.74
BDNFP23560 OR1AB1P-201ENST00000585564 761 ntBASIC4.19□□□□□ -1.74
BDNFP23560 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC4.19□□□□□ -1.74
BDNFP23560 AC004853.1-201ENST00000604902 698 ntBASIC4.19□□□□□ -1.74
BDNFP23560 AC016877.3-201ENST00000606778 504 ntBASIC4.19□□□□□ -1.74
BDNFP23560 AL357080.1-201ENST00000617394 239 ntBASIC4.19□□□□□ -1.74
BDNFP23560 PACRG-211ENST00000621363 360 ntTSL 5 BASIC4.19□□□□□ -1.74
BDNFP23560 AC231657.1-201ENST00000624313 397 ntBASIC4.19□□□□□ -1.74
BDNFP23560 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4.19□□□□□ -1.74
BDNFP23560 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
BDNFP23560 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.19□□□□□ -1.74
BDNFP23560 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
BDNFP23560 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
BDNFP23560 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
BDNFP23560 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.19□□□□□ -1.74
BDNFP23560 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.19□□□□□ -1.74
BDNFP23560 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
BDNFP23560 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
BDNFP23560 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
BDNFP23560 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC4.18□□□□□ -1.74
BDNFP23560 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
BDNFP23560 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
BDNFP23560 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
BDNFP23560 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC4.18□□□□□ -1.74
BDNFP23560 TAF9BP1-201ENST00000396646 746 ntBASIC4.18□□□□□ -1.74
BDNFP23560 MIR1251-201ENST00000408552 70 ntBASIC4.18□□□□□ -1.74
BDNFP23560 AC127526.1-201ENST00000417526 366 ntBASIC4.18□□□□□ -1.74
BDNFP23560 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC4.18□□□□□ -1.74
BDNFP23560 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
BDNFP23560 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC4.18□□□□□ -1.74
BDNFP23560 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
BDNFP23560 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC4.18□□□□□ -1.74
BDNFP23560 HIGD1AP11-201ENST00000438361 280 ntBASIC4.18□□□□□ -1.74
BDNFP23560 AL645638.1-201ENST00000440519 361 ntBASIC4.18□□□□□ -1.74
BDNFP23560 AL353748.1-201ENST00000440753 474 ntBASIC4.18□□□□□ -1.74
BDNFP23560 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC4.18□□□□□ -1.74
BDNFP23560 RAC1P7-201ENST00000445367 377 ntBASIC4.18□□□□□ -1.74
BDNFP23560 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC4.18□□□□□ -1.74
BDNFP23560 RPL36AP33-201ENST00000450395 310 ntBASIC4.18□□□□□ -1.74
BDNFP23560 AL353691.1-201ENST00000451332 387 ntBASIC4.18□□□□□ -1.74
BDNFP23560 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
BDNFP23560 TRGVB-201ENST00000453257 471 ntBASIC4.18□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 151.5 ms