Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.37□□□□□ -1.87
XRCC1P18887 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
XRCC1P18887 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.37□□□□□ -1.87
XRCC1P18887 HMGB1P5-201ENST00000255320 642 ntBASIC3.37□□□□□ -1.87
XRCC1P18887 RNU6-582P-201ENST00000362989 107 ntBASIC3.37□□□□□ -1.87
XRCC1P18887 RNA5SP267-201ENST00000364893 126 ntBASIC3.37□□□□□ -1.87
XRCC1P18887 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC3.37□□□□□ -1.87
XRCC1P18887 AC017079.2-201ENST00000416102 485 ntBASIC3.37□□□□□ -1.87
XRCC1P18887 AL513174.1-201ENST00000423182 629 ntBASIC3.37□□□□□ -1.87
XRCC1P18887 BX890604.2-201ENST00000427883 474 ntBASIC3.37□□□□□ -1.87
XRCC1P18887 MTCYBP32-201ENST00000427945 1084 ntBASIC3.37□□□□□ -1.87
XRCC1P18887 BLOC1S2P1-201ENST00000428431 301 ntBASIC3.37□□□□□ -1.87
XRCC1P18887 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC3.37□□□□□ -1.87
XRCC1P18887 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
XRCC1P18887 HSD52-202ENST00000436225 772 ntTSL 3 BASIC3.37□□□□□ -1.87
XRCC1P18887 AC241584.1-201ENST00000438469 1241 ntBASIC3.37□□□□□ -1.87
XRCC1P18887 AL034418.1-201ENST00000448675 860 ntBASIC3.37□□□□□ -1.87
XRCC1P18887 MRPL42P4-201ENST00000453267 443 ntBASIC3.37□□□□□ -1.87
XRCC1P18887 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC3.37□□□□□ -1.87
XRCC1P18887 HMGN1P18-201ENST00000457642 277 ntBASIC3.37□□□□□ -1.87
XRCC1P18887 RPL21P10-201ENST00000463521 490 ntBASIC3.37□□□□□ -1.87
XRCC1P18887 RPL23AP44-201ENST00000482216 473 ntBASIC3.37□□□□□ -1.87
XRCC1P18887 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
XRCC1P18887 FABP5P12-201ENST00000515543 389 ntBASIC3.37□□□□□ -1.87
XRCC1P18887 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC3.37□□□□□ -1.87
XRCC1P18887 AC093331.1-201ENST00000521474 169 ntBASIC3.37□□□□□ -1.87
XRCC1P18887 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC3.37□□□□□ -1.87
XRCC1P18887 AC104027.1-201ENST00000521887 300 ntBASIC3.37□□□□□ -1.87
XRCC1P18887 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.37□□□□□ -1.87
XRCC1P18887 NDUFS5P6-201ENST00000529136 295 ntBASIC3.37□□□□□ -1.87
XRCC1P18887 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3.37□□□□□ -1.87
XRCC1P18887 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC3.37□□□□□ -1.87
XRCC1P18887 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.37□□□□□ -1.87
XRCC1P18887 AC004024.1-201ENST00000549244 247 ntBASIC3.37□□□□□ -1.87
XRCC1P18887 AC011611.1-201ENST00000552179 197 ntBASIC3.37□□□□□ -1.87
XRCC1P18887 AC037471.2-201ENST00000564941 598 ntBASIC3.37□□□□□ -1.87
XRCC1P18887 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.37□□□□□ -1.87
XRCC1P18887 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.37□□□□□ -1.87
XRCC1P18887 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC3.37□□□□□ -1.87
XRCC1P18887 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC3.37□□□□□ -1.87
XRCC1P18887 AC006557.5-201ENST00000603126 811 ntBASIC3.37□□□□□ -1.87
XRCC1P18887 AL355812.1-201ENST00000603215 216 ntBASIC3.37□□□□□ -1.87
XRCC1P18887 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC3.37□□□□□ -1.87
XRCC1P18887 IGHV3-29-201ENST00000604817 344 ntBASIC3.37□□□□□ -1.87
XRCC1P18887 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.37□□□□□ -1.87
XRCC1P18887 AC018754.1-201ENST00000607486 925 ntBASIC3.37□□□□□ -1.87
XRCC1P18887 AL513477.2-201ENST00000607858 568 ntBASIC3.37□□□□□ -1.87
XRCC1P18887 AP005137.2-201ENST00000609238 400 ntBASIC3.37□□□□□ -1.87
XRCC1P18887 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC3.37□□□□□ -1.87
XRCC1P18887 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC3.37□□□□□ -1.87
XRCC1P18887 AL049777.1-201ENST00000622740 518 ntBASIC3.37□□□□□ -1.87
XRCC1P18887 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.37□□□□□ -1.87
XRCC1P18887 AC087821.2-201ENST00000637086 450 ntBASIC3.37□□□□□ -1.87
XRCC1P18887 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.37□□□□□ -1.87
XRCC1P18887 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
XRCC1P18887 ZNF542P-204ENST00000482727 1305 ntBASIC3.37□□□□□ -1.87
XRCC1P18887 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
XRCC1P18887 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.37□□□□□ -1.87
XRCC1P18887 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3.37□□□□□ -1.87
XRCC1P18887 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.37□□□□□ -1.87
XRCC1P18887 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
XRCC1P18887 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
XRCC1P18887 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
XRCC1P18887 FER-202ENST00000438717 1531 ntTSL 2 BASIC3.36□□□□□ -1.87
XRCC1P18887 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
XRCC1P18887 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
XRCC1P18887 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
XRCC1P18887 RNU6-251P-201ENST00000363235 104 ntBASIC3.36□□□□□ -1.87
XRCC1P18887 RNU6-805P-201ENST00000365643 106 ntBASIC3.36□□□□□ -1.87
XRCC1P18887 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
XRCC1P18887 RNVU1-14-201ENST00000384770 164 ntBASIC3.36□□□□□ -1.87
XRCC1P18887 RSL24D1P1-201ENST00000404972 493 ntBASIC3.36□□□□□ -1.87
XRCC1P18887 AL133384.1-201ENST00000412744 351 ntBASIC3.36□□□□□ -1.87
XRCC1P18887 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
XRCC1P18887 BTF3P8-201ENST00000414577 526 ntBASIC3.36□□□□□ -1.87
XRCC1P18887 KRR1P1-201ENST00000419430 803 ntBASIC3.36□□□□□ -1.87
XRCC1P18887 AL158156.1-201ENST00000422509 473 ntBASIC3.36□□□□□ -1.87
XRCC1P18887 TEX41-204ENST00000423031 491 ntTSL 4 BASIC3.36□□□□□ -1.87
XRCC1P18887 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
XRCC1P18887 MTCYBP42-201ENST00000444653 1130 ntBASIC3.36□□□□□ -1.87
XRCC1P18887 AC125238.1-201ENST00000448842 249 ntBASIC3.36□□□□□ -1.87
XRCC1P18887 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC3.36□□□□□ -1.87
XRCC1P18887 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.36□□□□□ -1.87
XRCC1P18887 NPM1P13-201ENST00000452663 865 ntBASIC3.36□□□□□ -1.87
XRCC1P18887 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.36□□□□□ -1.87
XRCC1P18887 AC008155.2-201ENST00000464337 397 ntBASIC3.36□□□□□ -1.87
XRCC1P18887 AC093663.1-201ENST00000497190 394 ntBASIC3.36□□□□□ -1.87
XRCC1P18887 BOLA3P3-201ENST00000505182 232 ntBASIC3.36□□□□□ -1.87
XRCC1P18887 FCF1P8-201ENST00000510322 597 ntBASIC3.36□□□□□ -1.87
XRCC1P18887 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.36□□□□□ -1.87
XRCC1P18887 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC3.36□□□□□ -1.87
XRCC1P18887 AC010376.1-201ENST00000522101 334 ntBASIC3.36□□□□□ -1.87
XRCC1P18887 MTCO3P15-201ENST00000526563 574 ntBASIC3.36□□□□□ -1.87
XRCC1P18887 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.36□□□□□ -1.87
XRCC1P18887 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.36□□□□□ -1.87
XRCC1P18887 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.36□□□□□ -1.87
XRCC1P18887 AL845331.3-202ENST00000562856 261 ntBASIC3.36□□□□□ -1.87
XRCC1P18887 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.36□□□□□ -1.87
XRCC1P18887 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.36□□□□□ -1.87
XRCC1P18887 AC012468.1-201ENST00000604888 430 ntBASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 96.4 ms