Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC3.95□□□□□ -1.78
CFTRP13569 AC103710.2-201ENST00000609912 942 ntBASIC3.95□□□□□ -1.78
CFTRP13569 U2.15-201ENST00000611544 191 ntBASIC3.95□□□□□ -1.78
CFTRP13569 U2.16-201ENST00000613119 191 ntBASIC3.95□□□□□ -1.78
CFTRP13569 U2.12-201ENST00000613778 191 ntBASIC3.95□□□□□ -1.78
CFTRP13569 U2.20-201ENST00000613956 192 ntBASIC3.95□□□□□ -1.78
CFTRP13569 U2.9-201ENST00000615427 191 ntBASIC3.95□□□□□ -1.78
CFTRP13569 U2.11-201ENST00000616345 191 ntBASIC3.95□□□□□ -1.78
CFTRP13569 U2.2-201ENST00000616535 191 ntBASIC3.95□□□□□ -1.78
CFTRP13569 U2.3-201ENST00000617785 191 ntBASIC3.95□□□□□ -1.78
CFTRP13569 U2.19-201ENST00000618602 191 ntBASIC3.95□□□□□ -1.78
CFTRP13569 RNU2-1-201ENST00000618664 191 ntBASIC3.95□□□□□ -1.78
CFTRP13569 U2.6-201ENST00000619225 191 ntBASIC3.95□□□□□ -1.78
CFTRP13569 U2.5-201ENST00000619465 191 ntBASIC3.95□□□□□ -1.78
CFTRP13569 U2.10-201ENST00000620268 191 ntBASIC3.95□□□□□ -1.78
CFTRP13569 AC074140.1-201ENST00000621617 208 ntBASIC3.95□□□□□ -1.78
CFTRP13569 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC3.95□□□□□ -1.78
CFTRP13569 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC3.95□□□□□ -1.78
CFTRP13569 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CFTRP13569 COX6CP2-201ENST00000444980 225 ntBASIC3.94□□□□□ -1.78
CFTRP13569 HMGB3P8-201ENST00000449709 577 ntBASIC3.94□□□□□ -1.78
CFTRP13569 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
CFTRP13569 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC3.94□□□□□ -1.78
CFTRP13569 RNU6-1334P-201ENST00000516032 105 ntBASIC3.94□□□□□ -1.78
CFTRP13569 ZDHHC20P3-201ENST00000531576 336 ntBASIC3.94□□□□□ -1.78
CFTRP13569 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC3.94□□□□□ -1.78
CFTRP13569 AC107871.2-201ENST00000612894 502 ntBASIC3.94□□□□□ -1.78
CFTRP13569 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CFTRP13569 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.94□□□□□ -1.78
CFTRP13569 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.93□□□□□ -1.78
CFTRP13569 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CFTRP13569 SNORA26.9-201ENST00000391322 122 ntBASIC3.93□□□□□ -1.78
CFTRP13569 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC3.93□□□□□ -1.78
CFTRP13569 PTP4A1P7-201ENST00000423476 514 ntBASIC3.93□□□□□ -1.78
CFTRP13569 AF186190.1-201ENST00000517470 480 ntBASIC3.93□□□□□ -1.78
CFTRP13569 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC3.93□□□□□ -1.78
CFTRP13569 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC3.93□□□□□ -1.78
CFTRP13569 MEG8-218ENST00000556720 456 ntTSL 3 BASIC3.93□□□□□ -1.78
CFTRP13569 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC3.93□□□□□ -1.78
CFTRP13569 MIR4498-201ENST00000577599 66 ntBASIC3.93□□□□□ -1.78
CFTRP13569 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC3.93□□□□□ -1.78
CFTRP13569 AP004247.3-201ENST00000608682 624 ntBASIC3.93□□□□□ -1.78
CFTRP13569 UBE2Q2P2-203ENST00000613592 761 ntBASIC3.93□□□□□ -1.78
CFTRP13569 MIR219B-201ENST00000637023 88 ntBASIC3.93□□□□□ -1.78
CFTRP13569 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CFTRP13569 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
CFTRP13569 CDC27P2-201ENST00000425026 1922 ntBASIC3.93□□□□□ -1.78
CFTRP13569 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC3.92□□□□□ -1.78
CFTRP13569 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CFTRP13569 SNORD21-201ENST00000383953 95 ntBASIC3.92□□□□□ -1.78
CFTRP13569 AL513175.2-201ENST00000422071 443 ntBASIC3.92□□□□□ -1.78
CFTRP13569 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC3.92□□□□□ -1.78
CFTRP13569 CACYBPP1-201ENST00000438592 684 ntBASIC3.92□□□□□ -1.78
CFTRP13569 VN1R48P-201ENST00000448149 1036 ntBASIC3.92□□□□□ -1.78
CFTRP13569 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.92□□□□□ -1.78
CFTRP13569 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC3.92□□□□□ -1.78
CFTRP13569 RPL21P71-201ENST00000465598 459 ntBASIC3.92□□□□□ -1.78
CFTRP13569 MTCYBP20-201ENST00000524239 1129 ntBASIC3.92□□□□□ -1.78
CFTRP13569 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CFTRP13569 AP001004.1-201ENST00000582468 324 ntBASIC3.92□□□□□ -1.78
CFTRP13569 MIR6766-201ENST00000622641 72 ntBASIC3.92□□□□□ -1.78
CFTRP13569 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CFTRP13569 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CFTRP13569 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
CFTRP13569 FAT1P1-201ENST00000406588 507 ntBASIC3.92□□□□□ -1.78
CFTRP13569 RNU2-22P-201ENST00000411266 212 ntBASIC3.92□□□□□ -1.78
CFTRP13569 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.92□□□□□ -1.78
CFTRP13569 AC002553.2-201ENST00000453217 340 ntBASIC3.92□□□□□ -1.78
CFTRP13569 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC3.92□□□□□ -1.78
CFTRP13569 RNU6-295P-201ENST00000516901 104 ntBASIC3.92□□□□□ -1.78
CFTRP13569 AC135628.1-201ENST00000568867 534 ntBASIC3.92□□□□□ -1.78
CFTRP13569 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.92□□□□□ -1.78
CFTRP13569 AL022099.1-201ENST00000604551 712 ntBASIC3.92□□□□□ -1.78
CFTRP13569 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.92□□□□□ -1.78
CFTRP13569 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CFTRP13569 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CFTRP13569 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
CFTRP13569 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC3.91□□□□□ -1.78
CFTRP13569 MIR7111-201ENST00000619751 72 ntBASIC3.91□□□□□ -1.78
CFTRP13569 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
CFTRP13569 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.78
CFTRP13569 OR5AQ1P-202ENST00000641257 1534 ntBASIC3.9□□□□□ -1.78
CFTRP13569 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.78
CFTRP13569 MTND5P29-201ENST00000458676 1807 ntBASIC3.9□□□□□ -1.78
CFTRP13569 RNA5SP129-201ENST00000410276 118 ntBASIC3.9□□□□□ -1.79
CFTRP13569 RPL31P45-201ENST00000419532 356 ntBASIC3.9□□□□□ -1.79
CFTRP13569 RPS15AP6-201ENST00000420703 385 ntBASIC3.9□□□□□ -1.79
CFTRP13569 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC3.9□□□□□ -1.79
CFTRP13569 AC135999.1-201ENST00000478962 479 ntBASIC3.9□□□□□ -1.79
CFTRP13569 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.9□□□□□ -1.79
CFTRP13569 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC3.9□□□□□ -1.79
CFTRP13569 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC3.9□□□□□ -1.79
CFTRP13569 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC3.9□□□□□ -1.79
CFTRP13569 BMS1P7-201ENST00000602440 1052 ntBASIC3.9□□□□□ -1.79
CFTRP13569 AC103710.1-201ENST00000610003 901 ntBASIC3.9□□□□□ -1.79
CFTRP13569 GABPAP-201ENST00000419271 1356 ntBASIC3.9□□□□□ -1.79
CFTRP13569 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.89□□□□□ -1.79
CFTRP13569 MIR221-201ENST00000385135 110 ntBASIC3.89□□□□□ -1.79
CFTRP13569 RPL23AP70-201ENST00000483361 460 ntBASIC3.89□□□□□ -1.79
CFTRP13569 AC117522.2-201ENST00000510049 657 ntBASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 93 ms