Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 U6.105-201ENST00000637379 88 ntBASIC4.23□□□□□ -1.73
MMP3P08254 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
MMP3P08254 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
MMP3P08254 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC4.23□□□□□ -1.73
MMP3P08254 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
MMP3P08254 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
MMP3P08254 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
MMP3P08254 ZNF833P-201ENST00000424938 1494 ntBASIC4.23□□□□□ -1.73
MMP3P08254 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
MMP3P08254 MTCO1P14-201ENST00000441695 1559 ntBASIC4.23□□□□□ -1.73
MMP3P08254 AC025125.1-201ENST00000624743 1922 ntBASIC4.23□□□□□ -1.73
MMP3P08254 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
MMP3P08254 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
MMP3P08254 Z73965.1-201ENST00000623412 2297 ntBASIC4.22□□□□□ -1.73
MMP3P08254 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
MMP3P08254 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
MMP3P08254 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
MMP3P08254 Y_RNA.18-201ENST00000362461 102 ntBASIC4.22□□□□□ -1.73
MMP3P08254 RNU6-251P-201ENST00000363235 104 ntBASIC4.22□□□□□ -1.73
MMP3P08254 RNU6-216P-201ENST00000363282 104 ntBASIC4.22□□□□□ -1.73
MMP3P08254 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
MMP3P08254 RNU6-921P-201ENST00000384361 107 ntBASIC4.22□□□□□ -1.73
MMP3P08254 AL121978.1-201ENST00000402778 359 ntBASIC4.22□□□□□ -1.73
MMP3P08254 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
MMP3P08254 ATP5A1P2-201ENST00000412323 255 ntBASIC4.22□□□□□ -1.73
MMP3P08254 TRAPPC2P10-201ENST00000415662 323 ntBASIC4.22□□□□□ -1.73
MMP3P08254 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
MMP3P08254 AC091390.3-201ENST00000426478 338 ntBASIC4.22□□□□□ -1.73
MMP3P08254 AL035407.1-201ENST00000429211 571 ntBASIC4.22□□□□□ -1.73
MMP3P08254 TRIM60P3Y-201ENST00000432201 673 ntBASIC4.22□□□□□ -1.73
MMP3P08254 AC010153.1-201ENST00000432862 727 ntBASIC4.22□□□□□ -1.73
MMP3P08254 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC4.22□□□□□ -1.73
MMP3P08254 AC241584.1-201ENST00000438469 1241 ntBASIC4.22□□□□□ -1.73
MMP3P08254 TAF9P1-201ENST00000445421 515 ntBASIC4.22□□□□□ -1.73
MMP3P08254 AL360221.1-201ENST00000445989 335 ntBASIC4.22□□□□□ -1.73
MMP3P08254 MTCO2P7-201ENST00000446518 666 ntBASIC4.22□□□□□ -1.73
MMP3P08254 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC4.22□□□□□ -1.73
MMP3P08254 PRDX3P3-201ENST00000447765 522 ntBASIC4.22□□□□□ -1.73
MMP3P08254 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC4.22□□□□□ -1.73
MMP3P08254 ZNF114P1-201ENST00000453500 292 ntBASIC4.22□□□□□ -1.73
MMP3P08254 TAF9P2-201ENST00000454958 515 ntBASIC4.22□□□□□ -1.73
MMP3P08254 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC4.22□□□□□ -1.73
MMP3P08254 SETP11-201ENST00000473027 690 ntBASIC4.22□□□□□ -1.73
MMP3P08254 RPL31P61-201ENST00000496160 376 ntBASIC4.22□□□□□ -1.73
MMP3P08254 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC4.22□□□□□ -1.73
MMP3P08254 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC4.22□□□□□ -1.73
MMP3P08254 RAC1P2-201ENST00000511164 579 ntBASIC4.22□□□□□ -1.73
MMP3P08254 AC060788.1-201ENST00000521318 469 ntBASIC4.22□□□□□ -1.73
MMP3P08254 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC4.22□□□□□ -1.73
MMP3P08254 CASP1-212ENST00000531166 300 ntTSL 5 BASIC4.22□□□□□ -1.73
MMP3P08254 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC4.22□□□□□ -1.73
MMP3P08254 ACTR3BP3-201ENST00000565577 979 ntBASIC4.22□□□□□ -1.73
MMP3P08254 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC4.22□□□□□ -1.73
MMP3P08254 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC4.22□□□□□ -1.73
MMP3P08254 ROCK1P1-201ENST00000573767 549 ntBASIC4.22□□□□□ -1.73
MMP3P08254 MESTIT1_2.1-201ENST00000616328 235 ntBASIC4.22□□□□□ -1.73
MMP3P08254 AC092650.2-201ENST00000619984 902 ntBASIC4.22□□□□□ -1.73
MMP3P08254 AC079684.1-201ENST00000621405 437 ntBASIC4.22□□□□□ -1.73
MMP3P08254 AC008443.7-201ENST00000622195 246 ntBASIC4.22□□□□□ -1.73
MMP3P08254 AL356266.1-201ENST00000623311 483 ntBASIC4.22□□□□□ -1.73
MMP3P08254 AC055839.1-201ENST00000634467 498 ntBASIC4.22□□□□□ -1.73
MMP3P08254 PCMTD1P7-201ENST00000634506 357 ntBASIC4.22□□□□□ -1.73
MMP3P08254 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC4.22□□□□□ -1.73
MMP3P08254 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
MMP3P08254 AC087190.4-201ENST00000574616 8334 ntBASIC4.22□□□□□ -1.73
MMP3P08254 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC4.22□□□□□ -1.73
MMP3P08254 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC4.22□□□□□ -1.73
MMP3P08254 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.21□□□□□ -1.73
MMP3P08254 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
MMP3P08254 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
MMP3P08254 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
MMP3P08254 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
MMP3P08254 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.21□□□□□ -1.74
MMP3P08254 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
MMP3P08254 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
MMP3P08254 CUBN-201ENST00000377823 705 ntTSL 3 BASIC4.21□□□□□ -1.74
MMP3P08254 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
MMP3P08254 RNU6-1122P-201ENST00000384449 107 ntBASIC4.21□□□□□ -1.74
MMP3P08254 SNRPEP2-201ENST00000397592 279 ntBASIC4.21□□□□□ -1.74
MMP3P08254 TPMTP3-201ENST00000411928 735 ntBASIC4.21□□□□□ -1.74
MMP3P08254 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC4.21□□□□□ -1.74
MMP3P08254 OFD1P12Y-201ENST00000427963 1207 ntBASIC4.21□□□□□ -1.74
MMP3P08254 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC4.21□□□□□ -1.74
MMP3P08254 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC4.21□□□□□ -1.74
MMP3P08254 MTND1P29-201ENST00000448112 647 ntBASIC4.21□□□□□ -1.74
MMP3P08254 RPS3AP46-201ENST00000448352 682 ntBASIC4.21□□□□□ -1.74
MMP3P08254 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC4.21□□□□□ -1.74
MMP3P08254 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC4.21□□□□□ -1.74
MMP3P08254 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC4.21□□□□□ -1.74
MMP3P08254 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC4.21□□□□□ -1.74
MMP3P08254 RN7SL293P-201ENST00000481765 281 ntBASIC4.21□□□□□ -1.74
MMP3P08254 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.21□□□□□ -1.74
MMP3P08254 AL024509.2-201ENST00000493462 493 ntBASIC4.21□□□□□ -1.74
MMP3P08254 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC4.21□□□□□ -1.74
MMP3P08254 AC108078.3-201ENST00000502633 489 ntBASIC4.21□□□□□ -1.74
MMP3P08254 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
MMP3P08254 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC4.21□□□□□ -1.74
MMP3P08254 SNORA74D-201ENST00000516404 141 ntBASIC4.21□□□□□ -1.74
MMP3P08254 SNORA70.24-201ENST00000517233 118 ntBASIC4.21□□□□□ -1.74
MMP3P08254 TBCA-206ENST00000518338 551 ntTSL 2 BASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 294.6 ms