Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 AC027644.1-201ENST00000419595 298 ntBASIC2.83□□□□□ -1.96
HLA-DPB1P04440 AL389915.1-201ENST00000422463 466 ntBASIC2.83□□□□□ -1.96
HLA-DPB1P04440 AC233981.1-201ENST00000423224 461 ntBASIC2.83□□□□□ -1.96
HLA-DPB1P04440 AC097713.2-201ENST00000430199 356 ntBASIC2.83□□□□□ -1.96
HLA-DPB1P04440 AL050321.1-201ENST00000432363 400 ntBASIC2.83□□□□□ -1.96
HLA-DPB1P04440 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC2.83□□□□□ -1.96
HLA-DPB1P04440 RPS12P18-201ENST00000442381 270 ntBASIC2.83□□□□□ -1.96
HLA-DPB1P04440 PRDX3P3-201ENST00000447765 522 ntBASIC2.83□□□□□ -1.96
HLA-DPB1P04440 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC2.83□□□□□ -1.96
HLA-DPB1P04440 PRSS3P4-201ENST00000453323 162 ntBASIC2.83□□□□□ -1.96
HLA-DPB1P04440 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC2.83□□□□□ -1.96
HLA-DPB1P04440 AL136126.1-201ENST00000473603 402 ntBASIC2.83□□□□□ -1.96
HLA-DPB1P04440 RPS17P11-201ENST00000474297 293 ntBASIC2.83□□□□□ -1.96
HLA-DPB1P04440 AC092451.1-201ENST00000480211 153 ntBASIC2.83□□□□□ -1.96
HLA-DPB1P04440 AC078918.1-201ENST00000498515 228 ntBASIC2.83□□□□□ -1.96
HLA-DPB1P04440 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC2.83□□□□□ -1.96
HLA-DPB1P04440 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC2.83□□□□□ -1.96
HLA-DPB1P04440 AC104057.1-201ENST00000515547 497 ntBASIC2.83□□□□□ -1.96
HLA-DPB1P04440 AP003066.2-201ENST00000529375 555 ntBASIC2.83□□□□□ -1.96
HLA-DPB1P04440 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC2.83□□□□□ -1.96
HLA-DPB1P04440 AC090666.1-201ENST00000578241 445 ntBASIC2.83□□□□□ -1.96
HLA-DPB1P04440 AC010928.3-201ENST00000587712 541 ntBASIC2.83□□□□□ -1.96
HLA-DPB1P04440 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC2.83□□□□□ -1.96
HLA-DPB1P04440 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC2.83□□□□□ -1.96
HLA-DPB1P04440 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC2.83□□□□□ -1.96
HLA-DPB1P04440 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC2.83□□□□□ -1.96
HLA-DPB1P04440 AL009028.1-201ENST00000604895 802 ntBASIC2.83□□□□□ -1.96
HLA-DPB1P04440 MIR92B-201ENST00000607575 96 ntBASIC2.83□□□□□ -1.96
HLA-DPB1P04440 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC2.83□□□□□ -1.96
HLA-DPB1P04440 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC2.83□□□□□ -1.96
HLA-DPB1P04440 VN1R7P-201ENST00000619242 903 ntBASIC2.83□□□□□ -1.96
HLA-DPB1P04440 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC2.83□□□□□ -1.96
HLA-DPB1P04440 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC2.83□□□□□ -1.96
HLA-DPB1P04440 AC068620.4-201ENST00000636730 1182 ntBASIC2.83□□□□□ -1.96
HLA-DPB1P04440 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
HLA-DPB1P04440 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC2.83□□□□□ -1.96
HLA-DPB1P04440 ZNF37BP-203ENST00000452306 1352 ntBASIC2.83□□□□□ -1.96
HLA-DPB1P04440 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC2.82□□□□□ -1.96
HLA-DPB1P04440 RNU5B-4P-201ENST00000363508 111 ntBASIC2.82□□□□□ -1.96
HLA-DPB1P04440 RNU1-33P-201ENST00000364249 162 ntBASIC2.82□□□□□ -1.96
HLA-DPB1P04440 AL603865.2-201ENST00000401679 213 ntBASIC2.82□□□□□ -1.96
HLA-DPB1P04440 SSXP10-201ENST00000402595 565 ntBASIC2.82□□□□□ -1.96
HLA-DPB1P04440 AL355615.1-201ENST00000406187 641 ntBASIC2.82□□□□□ -1.96
HLA-DPB1P04440 TANK-206ENST00000406287 875 ntTSL 5 BASIC2.82□□□□□ -1.96
HLA-DPB1P04440 AC244098.2-201ENST00000422068 99 ntBASIC2.82□□□□□ -1.96
HLA-DPB1P04440 RPF2P1-201ENST00000424137 906 ntBASIC2.82□□□□□ -1.96
HLA-DPB1P04440 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC2.82□□□□□ -1.96
HLA-DPB1P04440 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC2.82□□□□□ -1.96
HLA-DPB1P04440 OR2B8P-201ENST00000432841 938 ntBASIC2.82□□□□□ -1.96
HLA-DPB1P04440 RNF138P1-201ENST00000502765 546 ntBASIC2.82□□□□□ -1.96
HLA-DPB1P04440 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
HLA-DPB1P04440 MTCO3P44-201ENST00000510977 541 ntBASIC2.82□□□□□ -1.96
HLA-DPB1P04440 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC2.82□□□□□ -1.96
HLA-DPB1P04440 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC2.82□□□□□ -1.96
HLA-DPB1P04440 AP001207.1-201ENST00000524051 481 ntBASIC2.82□□□□□ -1.96
HLA-DPB1P04440 OR5D17P-201ENST00000531492 978 ntBASIC2.82□□□□□ -1.96
HLA-DPB1P04440 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
HLA-DPB1P04440 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC2.82□□□□□ -1.96
HLA-DPB1P04440 CYB5AP5-201ENST00000549779 389 ntBASIC2.82□□□□□ -1.96
HLA-DPB1P04440 SNORD39.3-201ENST00000584451 71 ntBASIC2.82□□□□□ -1.96
HLA-DPB1P04440 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC2.82□□□□□ -1.96
HLA-DPB1P04440 AC025588.3-201ENST00000604182 274 ntBASIC2.82□□□□□ -1.96
HLA-DPB1P04440 ELOCP35-201ENST00000604289 336 ntBASIC2.82□□□□□ -1.96
HLA-DPB1P04440 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC2.82□□□□□ -1.96
HLA-DPB1P04440 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC2.82□□□□□ -1.96
HLA-DPB1P04440 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC2.82□□□□□ -1.96
HLA-DPB1P04440 MIR6075-201ENST00000620782 95 ntBASIC2.82□□□□□ -1.96
HLA-DPB1P04440 AC244100.1-202ENST00000621554 382 ntBASIC2.82□□□□□ -1.96
HLA-DPB1P04440 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC2.82□□□□□ -1.96
HLA-DPB1P04440 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC2.82□□□□□ -1.96
HLA-DPB1P04440 AC139713.2-210ENST00000641741 992 ntBASIC2.82□□□□□ -1.96
HLA-DPB1P04440 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
HLA-DPB1P04440 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
HLA-DPB1P04440 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
HLA-DPB1P04440 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
HLA-DPB1P04440 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
HLA-DPB1P04440 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
HLA-DPB1P04440 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
HLA-DPB1P04440 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2.81□□□□□ -1.96
HLA-DPB1P04440 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
HLA-DPB1P04440 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
HLA-DPB1P04440 SNORD116-23-201ENST00000384645 92 ntBASIC2.81□□□□□ -1.96
HLA-DPB1P04440 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
HLA-DPB1P04440 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
HLA-DPB1P04440 MTCO2P31-201ENST00000402702 684 ntBASIC2.81□□□□□ -1.96
HLA-DPB1P04440 RNA5SP274-201ENST00000410484 108 ntBASIC2.81□□□□□ -1.96
HLA-DPB1P04440 RNA5SP344-201ENST00000411081 104 ntBASIC2.81□□□□□ -1.96
HLA-DPB1P04440 HMGN1P24-201ENST00000412282 298 ntBASIC2.81□□□□□ -1.96
HLA-DPB1P04440 AC063979.1-201ENST00000415539 377 ntBASIC2.81□□□□□ -1.96
HLA-DPB1P04440 RPS7P15-201ENST00000415804 584 ntBASIC2.81□□□□□ -1.96
HLA-DPB1P04440 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC2.81□□□□□ -1.96
HLA-DPB1P04440 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC2.81□□□□□ -1.96
HLA-DPB1P04440 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC2.81□□□□□ -1.96
HLA-DPB1P04440 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
HLA-DPB1P04440 AC013262.1-201ENST00000426710 252 ntBASIC2.81□□□□□ -1.96
HLA-DPB1P04440 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC2.81□□□□□ -1.96
HLA-DPB1P04440 RPL31P54-201ENST00000429803 370 ntBASIC2.81□□□□□ -1.96
HLA-DPB1P04440 RPL23AP69-201ENST00000431134 458 ntBASIC2.81□□□□□ -1.96
HLA-DPB1P04440 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC2.81□□□□□ -1.96
HLA-DPB1P04440 AC005019.1-201ENST00000436455 431 ntBASIC2.81□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 91.5 ms