Protein–RNA interactions for Protein: P02461

COL3A1, Collagen alpha-1(III) chain, humanhuman

Predicted RBP Predictions only

Length 1,466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1P02461 MTND1P15-201ENST00000579262 949 ntBASIC4.72□□□□□ -1.65
COL3A1P02461 WISP1-OT1-201ENST00000602893 642 ntBASIC4.72□□□□□ -1.65
COL3A1P02461 U73023.1-201ENST00000603134 700 ntBASIC4.72□□□□□ -1.65
COL3A1P02461 AC091805.2-201ENST00000603848 235 ntBASIC4.72□□□□□ -1.65
COL3A1P02461 AC115621.1-201ENST00000604653 858 ntBASIC4.72□□□□□ -1.65
COL3A1P02461 AC006077.1-201ENST00000604746 343 ntBASIC4.72□□□□□ -1.65
COL3A1P02461 AC018618.2-201ENST00000604770 446 ntBASIC4.72□□□□□ -1.65
COL3A1P02461 NDUFA8P1-201ENST00000605525 367 ntBASIC4.72□□□□□ -1.65
COL3A1P02461 Xist_exon4.1-201ENST00000615964 126 ntBASIC4.72□□□□□ -1.65
COL3A1P02461 AC139769.3-201ENST00000618383 175 ntBASIC4.72□□□□□ -1.65
COL3A1P02461 MIR7975-201ENST00000619350 68 ntBASIC4.72□□□□□ -1.65
COL3A1P02461 AC109454.4-201ENST00000623411 649 ntBASIC4.72□□□□□ -1.65
COL3A1P02461 AC099654.12-201ENST00000639868 649 ntBASIC4.72□□□□□ -1.65
COL3A1P02461 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
COL3A1P02461 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.72□□□□□ -1.65
COL3A1P02461 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC4.72□□□□□ -1.65
COL3A1P02461 AC007529.1-201ENST00000418574 2178 ntBASIC4.72□□□□□ -1.65
COL3A1P02461 PRO1804-201ENST00000623780 2050 ntBASIC4.72□□□□□ -1.65
COL3A1P02461 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.72□□□□□ -1.65
COL3A1P02461 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
COL3A1P02461 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC4.71□□□□□ -1.65
COL3A1P02461 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.65
COL3A1P02461 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.71□□□□□ -1.65
COL3A1P02461 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC4.71□□□□□ -1.66
COL3A1P02461 SCN1A-220ENST00000641603 12506 ntBASIC4.71□□□□□ -1.66
COL3A1P02461 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.71□□□□□ -1.66
COL3A1P02461 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC4.71□□□□□ -1.66
COL3A1P02461 FRG1CP-201ENST00000358464 769 ntBASIC4.71□□□□□ -1.66
COL3A1P02461 RNA5SP197-201ENST00000363357 119 ntBASIC4.71□□□□□ -1.66
COL3A1P02461 RNU1-87P-201ENST00000363727 170 ntBASIC4.71□□□□□ -1.66
COL3A1P02461 RNU6-1200P-201ENST00000384162 107 ntBASIC4.71□□□□□ -1.66
COL3A1P02461 RNU1-89P-201ENST00000384592 164 ntBASIC4.71□□□□□ -1.66
COL3A1P02461 MIR548F1-201ENST00000408667 84 ntBASIC4.71□□□□□ -1.66
COL3A1P02461 XKRYP4-201ENST00000414395 483 ntBASIC4.71□□□□□ -1.66
COL3A1P02461 FNDC3CP-201ENST00000420795 1155 ntBASIC4.71□□□□□ -1.66
COL3A1P02461 OR6K4P-201ENST00000423179 955 ntBASIC4.71□□□□□ -1.66
COL3A1P02461 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC4.71□□□□□ -1.66
COL3A1P02461 AC002075.2-201ENST00000425207 252 ntBASIC4.71□□□□□ -1.66
COL3A1P02461 C1DP1-201ENST00000426049 402 ntBASIC4.71□□□□□ -1.66
COL3A1P02461 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC4.71□□□□□ -1.66
COL3A1P02461 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC4.71□□□□□ -1.66
COL3A1P02461 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC4.71□□□□□ -1.66
COL3A1P02461 AL590103.1-201ENST00000434488 307 ntBASIC4.71□□□□□ -1.66
COL3A1P02461 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC4.71□□□□□ -1.66
COL3A1P02461 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC4.71□□□□□ -1.66
COL3A1P02461 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC4.71□□□□□ -1.66
COL3A1P02461 PRDX3P3-201ENST00000447765 522 ntBASIC4.71□□□□□ -1.66
COL3A1P02461 XKRYP5-201ENST00000449659 483 ntBASIC4.71□□□□□ -1.66
COL3A1P02461 AC093392.2-201ENST00000450682 337 ntBASIC4.71□□□□□ -1.66
COL3A1P02461 AC099560.2-201ENST00000457554 255 ntBASIC4.71□□□□□ -1.66
COL3A1P02461 U3.44-201ENST00000458938 192 ntBASIC4.71□□□□□ -1.66
COL3A1P02461 RN7SL594P-201ENST00000470590 287 ntBASIC4.71□□□□□ -1.66
COL3A1P02461 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC4.71□□□□□ -1.66
COL3A1P02461 AC114781.4-201ENST00000513707 639 ntBASIC4.71□□□□□ -1.66
COL3A1P02461 RNU6-678P-201ENST00000516832 109 ntBASIC4.71□□□□□ -1.66
COL3A1P02461 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC4.71□□□□□ -1.66
COL3A1P02461 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
COL3A1P02461 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC4.71□□□□□ -1.66
COL3A1P02461 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC4.71□□□□□ -1.66
COL3A1P02461 AC012435.1-202ENST00000568772 240 ntBASIC4.71□□□□□ -1.66
COL3A1P02461 SRGNP1-201ENST00000603392 451 ntBASIC4.71□□□□□ -1.66
COL3A1P02461 AC107075.1-201ENST00000613695 314 ntBASIC4.71□□□□□ -1.66
COL3A1P02461 U4.5-201ENST00000617137 123 ntBASIC4.71□□□□□ -1.66
COL3A1P02461 AC022149.2-201ENST00000621061 203 ntBASIC4.71□□□□□ -1.66
COL3A1P02461 AC015726.3-201ENST00000624501 418 ntBASIC4.71□□□□□ -1.66
COL3A1P02461 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC4.71□□□□□ -1.66
COL3A1P02461 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
COL3A1P02461 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.71□□□□□ -1.66
COL3A1P02461 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC4.71□□□□□ -1.66
COL3A1P02461 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
COL3A1P02461 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.7□□□□□ -1.66
COL3A1P02461 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
COL3A1P02461 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.7□□□□□ -1.66
COL3A1P02461 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
COL3A1P02461 AC073073.2-201ENST00000609827 2578 ntBASIC4.7□□□□□ -1.66
COL3A1P02461 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
COL3A1P02461 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.7□□□□□ -1.66
COL3A1P02461 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
COL3A1P02461 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC4.7□□□□□ -1.66
COL3A1P02461 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
COL3A1P02461 NDUFB4P4-201ENST00000404822 243 ntBASIC4.7□□□□□ -1.66
COL3A1P02461 RNU6-757P-201ENST00000410334 100 ntBASIC4.7□□□□□ -1.66
COL3A1P02461 DPPA2P2-201ENST00000418220 897 ntBASIC4.7□□□□□ -1.66
COL3A1P02461 MED14P1-201ENST00000430517 648 ntBASIC4.7□□□□□ -1.66
COL3A1P02461 USP9YP31-201ENST00000431405 881 ntBASIC4.7□□□□□ -1.66
COL3A1P02461 UBE2V1P8-201ENST00000437166 265 ntBASIC4.7□□□□□ -1.66
COL3A1P02461 MTND3P1-201ENST00000441336 220 ntBASIC4.7□□□□□ -1.66
COL3A1P02461 AC112653.1-201ENST00000443851 386 ntBASIC4.7□□□□□ -1.66
COL3A1P02461 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC4.7□□□□□ -1.66
COL3A1P02461 MTND5P20-201ENST00000448677 143 ntBASIC4.7□□□□□ -1.66
COL3A1P02461 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC4.7□□□□□ -1.66
COL3A1P02461 SETP11-201ENST00000473027 690 ntBASIC4.7□□□□□ -1.66
COL3A1P02461 AC093663.1-201ENST00000497190 394 ntBASIC4.7□□□□□ -1.66
COL3A1P02461 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC4.7□□□□□ -1.66
COL3A1P02461 AC106038.2-201ENST00000520706 568 ntBASIC4.7□□□□□ -1.66
COL3A1P02461 AC007954.1-201ENST00000554198 494 ntBASIC4.7□□□□□ -1.66
COL3A1P02461 AL121576.1-201ENST00000556055 276 ntBASIC4.7□□□□□ -1.66
COL3A1P02461 AC084757.1-201ENST00000559987 490 ntBASIC4.7□□□□□ -1.66
COL3A1P02461 AADACP1-206ENST00000561502 1193 ntBASIC4.7□□□□□ -1.66
COL3A1P02461 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 126.2 ms