Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 AC073534.2-201ENST00000620377 381 ntBASIC3.76□□□□□ -1.81
COL2A1P02458 FRG1DP-201ENST00000635586 771 ntBASIC3.76□□□□□ -1.81
COL2A1P02458 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
COL2A1P02458 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.76□□□□□ -1.81
COL2A1P02458 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.76□□□□□ -1.81
COL2A1P02458 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC3.76□□□□□ -1.81
COL2A1P02458 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.76□□□□□ -1.81
COL2A1P02458 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
COL2A1P02458 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
COL2A1P02458 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC3.75□□□□□ -1.81
COL2A1P02458 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC3.75□□□□□ -1.81
COL2A1P02458 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.75□□□□□ -1.81
COL2A1P02458 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
COL2A1P02458 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
COL2A1P02458 OR56A5-201ENST00000340110 738 ntBASIC3.75□□□□□ -1.81
COL2A1P02458 RNU4-24P-201ENST00000364565 139 ntBASIC3.75□□□□□ -1.81
COL2A1P02458 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC3.75□□□□□ -1.81
COL2A1P02458 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
COL2A1P02458 SNORD116-12-201ENST00000384468 92 ntBASIC3.75□□□□□ -1.81
COL2A1P02458 AL356131.1-201ENST00000405826 414 ntBASIC3.75□□□□□ -1.81
COL2A1P02458 RANP4-201ENST00000413361 655 ntBASIC3.75□□□□□ -1.81
COL2A1P02458 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC3.75□□□□□ -1.81
COL2A1P02458 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC3.75□□□□□ -1.81
COL2A1P02458 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC3.75□□□□□ -1.81
COL2A1P02458 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
COL2A1P02458 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC3.75□□□□□ -1.81
COL2A1P02458 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.75□□□□□ -1.81
COL2A1P02458 MTCO2P16-201ENST00000436962 677 ntBASIC3.75□□□□□ -1.81
COL2A1P02458 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.75□□□□□ -1.81
COL2A1P02458 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC3.75□□□□□ -1.81
COL2A1P02458 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC3.75□□□□□ -1.81
COL2A1P02458 HMGB1P5-202ENST00000451497 985 ntBASIC3.75□□□□□ -1.81
COL2A1P02458 AL121877.1-201ENST00000453704 622 ntBASIC3.75□□□□□ -1.81
COL2A1P02458 SEPT7P3-201ENST00000455017 621 ntBASIC3.75□□□□□ -1.81
COL2A1P02458 AC008379.1-201ENST00000463655 464 ntBASIC3.75□□□□□ -1.81
COL2A1P02458 RPS17P11-201ENST00000474297 293 ntBASIC3.75□□□□□ -1.81
COL2A1P02458 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC3.75□□□□□ -1.81
COL2A1P02458 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC3.75□□□□□ -1.81
COL2A1P02458 ARL2BPP6-201ENST00000512757 439 ntBASIC3.75□□□□□ -1.81
COL2A1P02458 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC3.75□□□□□ -1.81
COL2A1P02458 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.75□□□□□ -1.81
COL2A1P02458 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
COL2A1P02458 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC3.75□□□□□ -1.81
COL2A1P02458 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC3.75□□□□□ -1.81
COL2A1P02458 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC3.75□□□□□ -1.81
COL2A1P02458 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC3.75□□□□□ -1.81
COL2A1P02458 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.75□□□□□ -1.81
COL2A1P02458 BNIP3P30-201ENST00000601184 574 ntBASIC3.75□□□□□ -1.81
COL2A1P02458 AC103881.1-201ENST00000603476 538 ntBASIC3.75□□□□□ -1.81
COL2A1P02458 MTND3P19-201ENST00000603825 345 ntBASIC3.75□□□□□ -1.81
COL2A1P02458 AC079610.2-201ENST00000604818 690 ntBASIC3.75□□□□□ -1.81
COL2A1P02458 HMGB1P51-201ENST00000605166 638 ntBASIC3.75□□□□□ -1.81
COL2A1P02458 AP002802.2-201ENST00000605877 235 ntBASIC3.75□□□□□ -1.81
COL2A1P02458 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC3.75□□□□□ -1.81
COL2A1P02458 AC099842.1-201ENST00000619919 596 ntBASIC3.75□□□□□ -1.81
COL2A1P02458 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC3.75□□□□□ -1.81
COL2A1P02458 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
COL2A1P02458 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.75□□□□□ -1.81
COL2A1P02458 AC025263.3-201ENST00000622965 1396 ntBASIC3.75□□□□□ -1.81
COL2A1P02458 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
COL2A1P02458 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.75□□□□□ -1.81
COL2A1P02458 RMST-202ENST00000541282 2099 ntTSL 2 BASIC3.75□□□□□ -1.81
COL2A1P02458 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.75□□□□□ -1.81
COL2A1P02458 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.75□□□□□ -1.81
COL2A1P02458 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
COL2A1P02458 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
COL2A1P02458 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
COL2A1P02458 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
COL2A1P02458 AC104446.1-201ENST00000613728 1321 ntBASIC3.74□□□□□ -1.81
COL2A1P02458 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
COL2A1P02458 RNU6-207P-201ENST00000384137 107 ntBASIC3.74□□□□□ -1.81
COL2A1P02458 MIR1261-201ENST00000408659 82 ntBASIC3.74□□□□□ -1.81
COL2A1P02458 VN1R42P-201ENST00000424651 344 ntBASIC3.74□□□□□ -1.81
COL2A1P02458 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.74□□□□□ -1.81
COL2A1P02458 AL513175.1-201ENST00000431492 780 ntBASIC3.74□□□□□ -1.81
COL2A1P02458 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC3.74□□□□□ -1.81
COL2A1P02458 SNRPFP2-201ENST00000440710 251 ntBASIC3.74□□□□□ -1.81
COL2A1P02458 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC3.74□□□□□ -1.81
COL2A1P02458 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.74□□□□□ -1.81
COL2A1P02458 PTENP1-201ENST00000447117 1215 ntBASIC3.74□□□□□ -1.81
COL2A1P02458 AC239809.1-201ENST00000450470 217 ntBASIC3.74□□□□□ -1.81
COL2A1P02458 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC3.74□□□□□ -1.81
COL2A1P02458 BX276092.4-201ENST00000452056 248 ntBASIC3.74□□□□□ -1.81
COL2A1P02458 AC005410.1-202ENST00000460347 485 ntBASIC3.74□□□□□ -1.81
COL2A1P02458 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC3.74□□□□□ -1.81
COL2A1P02458 AC011352.1-201ENST00000512300 793 ntBASIC3.74□□□□□ -1.81
COL2A1P02458 MRPS33P3-201ENST00000513456 322 ntBASIC3.74□□□□□ -1.81
COL2A1P02458 FABP5P12-201ENST00000515543 389 ntBASIC3.74□□□□□ -1.81
COL2A1P02458 AC105185.1-201ENST00000518705 535 ntBASIC3.74□□□□□ -1.81
COL2A1P02458 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC3.74□□□□□ -1.81
COL2A1P02458 AP002404.1-201ENST00000532005 451 ntBASIC3.74□□□□□ -1.81
COL2A1P02458 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
COL2A1P02458 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC3.74□□□□□ -1.81
COL2A1P02458 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.74□□□□□ -1.81
COL2A1P02458 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC3.74□□□□□ -1.81
COL2A1P02458 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC3.74□□□□□ -1.81
COL2A1P02458 AC010735.1-201ENST00000567305 1026 ntBASIC3.74□□□□□ -1.81
COL2A1P02458 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC3.74□□□□□ -1.81
COL2A1P02458 UBL5P2-201ENST00000583788 219 ntBASIC3.74□□□□□ -1.81
COL2A1P02458 AL390838.2-201ENST00000602394 274 ntBASIC3.74□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms