Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 YWHAZP7-201ENST00000436906 631 ntBASIC2.54□□□□□ -2
TNFP01375 AC011816.1-201ENST00000441346 546 ntBASIC2.54□□□□□ -2
TNFP01375 AL590399.6-201ENST00000446396 307 ntBASIC2.54□□□□□ -2
TNFP01375 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC2.54□□□□□ -2
TNFP01375 AL590639.1-201ENST00000456484 337 ntBASIC2.54□□□□□ -2
TNFP01375 NUCB2-202ENST00000458064 1279 ntTSL 1 (best) BASIC2.54□□□□□ -2
TNFP01375 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC2.54□□□□□ -2
TNFP01375 AC147055.1-201ENST00000509261 750 ntBASIC2.54□□□□□ -2
TNFP01375 RPL7P20-201ENST00000520308 745 ntBASIC2.54□□□□□ -2
TNFP01375 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.54□□□□□ -2
TNFP01375 AP000857.1-201ENST00000532151 543 ntBASIC2.54□□□□□ -2
TNFP01375 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC2.54□□□□□ -2
TNFP01375 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.54□□□□□ -2
TNFP01375 SERPINE4P-201ENST00000554978 281 ntBASIC2.54□□□□□ -2
TNFP01375 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC2.54□□□□□ -2
TNFP01375 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC2.54□□□□□ -2
TNFP01375 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
TNFP01375 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.54□□□□□ -2
TNFP01375 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
TNFP01375 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.54□□□□□ -2
TNFP01375 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.54□□□□□ -2
TNFP01375 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.53□□□□□ -2
TNFP01375 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.53□□□□□ -2
TNFP01375 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.53□□□□□ -2
TNFP01375 AL161431.1-201ENST00000618966 4205 ntBASIC2.53□□□□□ -2
TNFP01375 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC2.53□□□□□ -2
TNFP01375 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC2.53□□□□□ -2
TNFP01375 MIR27B-201ENST00000385129 97 ntBASIC2.53□□□□□ -2
TNFP01375 VN1R51P-201ENST00000411675 945 ntBASIC2.53□□□□□ -2
TNFP01375 RPL31P2-201ENST00000413849 377 ntBASIC2.53□□□□□ -2
TNFP01375 HMGB1P12-201ENST00000438594 598 ntBASIC2.53□□□□□ -2
TNFP01375 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC2.53□□□□□ -2
TNFP01375 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC2.53□□□□□ -2
TNFP01375 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.53□□□□□ -2
TNFP01375 AC100870.1-201ENST00000522035 505 ntBASIC2.53□□□□□ -2
TNFP01375 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.53□□□□□ -2
TNFP01375 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.53□□□□□ -2
TNFP01375 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC2.53□□□□□ -2
TNFP01375 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC2.53□□□□□ -2
TNFP01375 AC010653.1-201ENST00000571108 881 ntBASIC2.53□□□□□ -2
TNFP01375 VN1R81P-201ENST00000602085 372 ntBASIC2.53□□□□□ -2
TNFP01375 AC034236.3-201ENST00000605999 461 ntBASIC2.53□□□□□ -2
TNFP01375 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC2.53□□□□□ -2
TNFP01375 U4.3-201ENST00000621047 82 ntBASIC2.53□□□□□ -2
TNFP01375 CR381653.2-201ENST00000624041 768 ntBASIC2.53□□□□□ -2
TNFP01375 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC2.53□□□□□ -2
TNFP01375 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
TNFP01375 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.53□□□□□ -2
TNFP01375 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
TNFP01375 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
TNFP01375 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC2.52□□□□□ -2.01
TNFP01375 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
TNFP01375 AC009501.3-201ENST00000605001 1352 ntBASIC2.52□□□□□ -2.01
TNFP01375 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
TNFP01375 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
TNFP01375 AC004944.1-201ENST00000517807 3059 ntBASIC2.52□□□□□ -2.01
TNFP01375 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
TNFP01375 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC2.52□□□□□ -2.01
TNFP01375 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC2.52□□□□□ -2.01
TNFP01375 CCNB2P1-201ENST00000399411 1150 ntBASIC2.52□□□□□ -2.01
TNFP01375 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.52□□□□□ -2.01
TNFP01375 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC2.52□□□□□ -2.01
TNFP01375 RN7SL429P-201ENST00000479090 223 ntBASIC2.52□□□□□ -2.01
TNFP01375 RN7SL489P-201ENST00000486185 223 ntBASIC2.52□□□□□ -2.01
TNFP01375 RN7SL327P-201ENST00000488659 223 ntBASIC2.52□□□□□ -2.01
TNFP01375 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.52□□□□□ -2.01
TNFP01375 AC239860.2-201ENST00000525886 270 ntBASIC2.52□□□□□ -2.01
TNFP01375 CD69-203ENST00000536709 1020 ntTSL 2 BASIC2.52□□□□□ -2.01
TNFP01375 AC243972.3-201ENST00000539655 198 ntBASIC2.52□□□□□ -2.01
TNFP01375 AP002770.2-201ENST00000543613 532 ntBASIC2.52□□□□□ -2.01
TNFP01375 C1GALT1P1-201ENST00000548895 1089 ntBASIC2.52□□□□□ -2.01
TNFP01375 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC2.52□□□□□ -2.01
TNFP01375 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC2.52□□□□□ -2.01
TNFP01375 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC2.52□□□□□ -2.01
TNFP01375 RN7SL853P-201ENST00000617250 223 ntBASIC2.52□□□□□ -2.01
TNFP01375 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
TNFP01375 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC2.52□□□□□ -2.01
TNFP01375 EFTUD1P2-201ENST00000514817 1603 ntBASIC2.52□□□□□ -2.01
TNFP01375 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
TNFP01375 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
TNFP01375 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
TNFP01375 AL136164.4-201ENST00000625013 2135 ntBASIC2.51□□□□□ -2.01
TNFP01375 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
TNFP01375 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.51□□□□□ -2.01
TNFP01375 RNU1-101P-201ENST00000391171 127 ntBASIC2.51□□□□□ -2.01
TNFP01375 SNORD88.1-201ENST00000408684 91 ntBASIC2.51□□□□□ -2.01
TNFP01375 AL035407.1-201ENST00000429211 571 ntBASIC2.51□□□□□ -2.01
TNFP01375 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC2.51□□□□□ -2.01
TNFP01375 RPL21P2-201ENST00000440049 481 ntBASIC2.51□□□□□ -2.01
TNFP01375 RPL32P28-201ENST00000443577 397 ntBASIC2.51□□□□□ -2.01
TNFP01375 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC2.51□□□□□ -2.01
TNFP01375 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC2.51□□□□□ -2.01
TNFP01375 HMGB1P25-201ENST00000468402 607 ntBASIC2.51□□□□□ -2.01
TNFP01375 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC2.51□□□□□ -2.01
TNFP01375 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC2.51□□□□□ -2.01
TNFP01375 AC103975.1-201ENST00000482506 483 ntBASIC2.51□□□□□ -2.01
TNFP01375 DYNLL1P6-201ENST00000503440 264 ntBASIC2.51□□□□□ -2.01
TNFP01375 ARL4AP2-201ENST00000507378 601 ntBASIC2.51□□□□□ -2.01
TNFP01375 RN7SKP24-201ENST00000515888 284 ntBASIC2.51□□□□□ -2.01
TNFP01375 RN7SKP82-201ENST00000516786 223 ntBASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 76.8 ms