Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 OR4F13P-201ENST00000428478 931 ntBASIC3.91□□□□□ -1.78
LDLRP01130 NPM1P34-201ENST00000428821 893 ntBASIC3.91□□□□□ -1.78
LDLRP01130 YME1L1P1-201ENST00000429435 297 ntBASIC3.91□□□□□ -1.78
LDLRP01130 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC3.91□□□□□ -1.78
LDLRP01130 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC3.91□□□□□ -1.78
LDLRP01130 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC3.91□□□□□ -1.78
LDLRP01130 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC3.91□□□□□ -1.78
LDLRP01130 MTND5P28-201ENST00000438005 1594 ntBASIC3.91□□□□□ -1.78
LDLRP01130 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.91□□□□□ -1.78
LDLRP01130 RPL23AP52-201ENST00000439311 478 ntBASIC3.91□□□□□ -1.78
LDLRP01130 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC3.91□□□□□ -1.78
LDLRP01130 RPS26P56-201ENST00000444468 240 ntBASIC3.91□□□□□ -1.78
LDLRP01130 MTND1P1-201ENST00000445453 368 ntBASIC3.91□□□□□ -1.78
LDLRP01130 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC3.91□□□□□ -1.78
LDLRP01130 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC3.91□□□□□ -1.78
LDLRP01130 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC3.91□□□□□ -1.78
LDLRP01130 MTCO2P18-201ENST00000457151 658 ntBASIC3.91□□□□□ -1.78
LDLRP01130 RPL31P3-201ENST00000458430 332 ntBASIC3.91□□□□□ -1.78
LDLRP01130 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC3.91□□□□□ -1.78
LDLRP01130 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.91□□□□□ -1.78
LDLRP01130 RPS20P21-201ENST00000466859 343 ntBASIC3.91□□□□□ -1.78
LDLRP01130 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC3.91□□□□□ -1.78
LDLRP01130 ACTG1P13-201ENST00000486987 1043 ntBASIC3.91□□□□□ -1.78
LDLRP01130 RN7SL691P-201ENST00000494487 301 ntBASIC3.91□□□□□ -1.78
LDLRP01130 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC3.91□□□□□ -1.78
LDLRP01130 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
LDLRP01130 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC3.91□□□□□ -1.78
LDLRP01130 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.91□□□□□ -1.78
LDLRP01130 RNA5SP309-201ENST00000516670 106 ntBASIC3.91□□□□□ -1.78
LDLRP01130 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC3.91□□□□□ -1.78
LDLRP01130 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
LDLRP01130 ARL2BPP5-201ENST00000523141 481 ntBASIC3.91□□□□□ -1.78
LDLRP01130 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC3.91□□□□□ -1.78
LDLRP01130 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC3.91□□□□□ -1.78
LDLRP01130 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC3.91□□□□□ -1.78
LDLRP01130 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC3.91□□□□□ -1.78
LDLRP01130 AL391156.1-201ENST00000554965 554 ntBASIC3.91□□□□□ -1.78
LDLRP01130 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC3.91□□□□□ -1.78
LDLRP01130 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC3.91□□□□□ -1.78
LDLRP01130 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.91□□□□□ -1.78
LDLRP01130 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC3.91□□□□□ -1.78
LDLRP01130 AC107982.3-201ENST00000584957 985 ntBASIC3.91□□□□□ -1.78
LDLRP01130 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.91□□□□□ -1.78
LDLRP01130 AC104662.1-201ENST00000604448 511 ntBASIC3.91□□□□□ -1.78
LDLRP01130 DPRXP5-201ENST00000604662 539 ntBASIC3.91□□□□□ -1.78
LDLRP01130 AL354984.3-201ENST00000604803 325 ntBASIC3.91□□□□□ -1.78
LDLRP01130 RNU4-89P-201ENST00000607443 133 ntBASIC3.91□□□□□ -1.78
LDLRP01130 VIS1.1-201ENST00000610517 203 ntBASIC3.91□□□□□ -1.78
LDLRP01130 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC3.91□□□□□ -1.78
LDLRP01130 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
LDLRP01130 CR392039.5-201ENST00000623201 510 ntBASIC3.91□□□□□ -1.78
LDLRP01130 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC3.91□□□□□ -1.78
LDLRP01130 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC3.91□□□□□ -1.78
LDLRP01130 TEX41-265ENST00000627785 704 ntTSL 5 BASIC3.91□□□□□ -1.78
LDLRP01130 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC3.91□□□□□ -1.78
LDLRP01130 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
LDLRP01130 AC117529.2-201ENST00000512159 2068 ntBASIC3.91□□□□□ -1.78
LDLRP01130 ERCC6-202ENST00000374127 1782 ntBASIC3.91□□□□□ -1.78
LDLRP01130 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
LDLRP01130 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.91□□□□□ -1.78
LDLRP01130 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.9□□□□□ -1.78
LDLRP01130 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.78
LDLRP01130 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC3.9□□□□□ -1.78
LDLRP01130 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.9□□□□□ -1.78
LDLRP01130 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
LDLRP01130 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
LDLRP01130 RNA5SP130-201ENST00000364431 114 ntBASIC3.9□□□□□ -1.79
LDLRP01130 RNU4-75P-201ENST00000364621 146 ntBASIC3.9□□□□□ -1.79
LDLRP01130 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.79
LDLRP01130 RNU6-1226P-201ENST00000384317 107 ntBASIC3.9□□□□□ -1.79
LDLRP01130 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
LDLRP01130 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
LDLRP01130 RPL21P65-201ENST00000406094 466 ntBASIC3.9□□□□□ -1.79
LDLRP01130 RN7SKP33-201ENST00000410942 340 ntBASIC3.9□□□□□ -1.79
LDLRP01130 PGBD4P8-201ENST00000412993 562 ntBASIC3.9□□□□□ -1.79
LDLRP01130 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.9□□□□□ -1.79
LDLRP01130 RPL31P45-201ENST00000419532 356 ntBASIC3.9□□□□□ -1.79
LDLRP01130 AL139095.3-201ENST00000419672 1203 ntBASIC3.9□□□□□ -1.79
LDLRP01130 AC011233.1-201ENST00000422812 283 ntBASIC3.9□□□□□ -1.79
LDLRP01130 AC091390.3-201ENST00000426478 338 ntBASIC3.9□□□□□ -1.79
LDLRP01130 GOT2P5-201ENST00000433995 546 ntBASIC3.9□□□□□ -1.79
LDLRP01130 USP9YP7-201ENST00000436723 430 ntBASIC3.9□□□□□ -1.79
LDLRP01130 ISCA1P2-201ENST00000438679 421 ntBASIC3.9□□□□□ -1.79
LDLRP01130 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC3.9□□□□□ -1.79
LDLRP01130 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC3.9□□□□□ -1.79
LDLRP01130 USP9YP32-201ENST00000452432 430 ntBASIC3.9□□□□□ -1.79
LDLRP01130 MTND3P7-201ENST00000474435 343 ntBASIC3.9□□□□□ -1.79
LDLRP01130 RPS29P19-201ENST00000479709 171 ntBASIC3.9□□□□□ -1.79
LDLRP01130 AC005726.1-201ENST00000494679 427 ntBASIC3.9□□□□□ -1.79
LDLRP01130 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.9□□□□□ -1.79
LDLRP01130 RNY4P37-201ENST00000516225 96 ntBASIC3.9□□□□□ -1.79
LDLRP01130 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC3.9□□□□□ -1.79
LDLRP01130 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC3.9□□□□□ -1.79
LDLRP01130 PTP4A1P6-201ENST00000531034 478 ntBASIC3.9□□□□□ -1.79
LDLRP01130 GNRHR2P1-201ENST00000555315 631 ntBASIC3.9□□□□□ -1.79
LDLRP01130 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC3.9□□□□□ -1.79
LDLRP01130 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC3.9□□□□□ -1.79
LDLRP01130 AC006539.2-201ENST00000601729 572 ntBASIC3.9□□□□□ -1.79
LDLRP01130 AP001521.1-201ENST00000609150 300 ntBASIC3.9□□□□□ -1.79
LDLRP01130 AC104073.3-201ENST00000610942 955 ntBASIC3.9□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 134.5 ms