Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
CLDN1O95832 ZNF833P-201ENST00000424938 1494 ntBASIC3.53□□□□□ -1.84
CLDN1O95832 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CLDN1O95832 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CLDN1O95832 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC3.52□□□□□ -1.85
CLDN1O95832 AC097504.1-201ENST00000515103 2415 ntBASIC3.52□□□□□ -1.85
CLDN1O95832 AL031985.3-201ENST00000565390 2449 ntBASIC3.52□□□□□ -1.85
CLDN1O95832 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
CLDN1O95832 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CLDN1O95832 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.52□□□□□ -1.85
CLDN1O95832 ZNF962P-201ENST00000443465 3140 ntBASIC3.52□□□□□ -1.85
CLDN1O95832 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.52□□□□□ -1.85
CLDN1O95832 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.52□□□□□ -1.85
CLDN1O95832 SNORA60-201ENST00000362396 134 ntBASIC3.52□□□□□ -1.85
CLDN1O95832 RNU6-553P-201ENST00000364047 96 ntBASIC3.52□□□□□ -1.85
CLDN1O95832 RNU6-1200P-201ENST00000384162 107 ntBASIC3.52□□□□□ -1.85
CLDN1O95832 RNU6-921P-201ENST00000384361 107 ntBASIC3.52□□□□□ -1.85
CLDN1O95832 MIR3074-201ENST00000384885 81 ntBASIC3.52□□□□□ -1.85
CLDN1O95832 SKINT1L-201ENST00000401057 817 ntBASIC3.52□□□□□ -1.85
CLDN1O95832 AL122016.1-201ENST00000403365 367 ntBASIC3.52□□□□□ -1.85
CLDN1O95832 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC3.52□□□□□ -1.85
CLDN1O95832 JKAMPP1-201ENST00000413804 919 ntBASIC3.52□□□□□ -1.85
CLDN1O95832 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC3.52□□□□□ -1.85
CLDN1O95832 TRBV24OR9-2-201ENST00000416632 435 ntBASIC3.52□□□□□ -1.85
CLDN1O95832 DNAJA1P2-201ENST00000421360 1197 ntBASIC3.52□□□□□ -1.85
CLDN1O95832 MTCO3P1-205ENST00000422088 832 ntBASIC3.52□□□□□ -1.85
CLDN1O95832 AL022400.1-201ENST00000423946 935 ntBASIC3.52□□□□□ -1.85
CLDN1O95832 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC3.52□□□□□ -1.85
CLDN1O95832 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC3.52□□□□□ -1.85
CLDN1O95832 RPS25P9-201ENST00000435591 252 ntBASIC3.52□□□□□ -1.85
CLDN1O95832 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.52□□□□□ -1.85
CLDN1O95832 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC3.52□□□□□ -1.85
CLDN1O95832 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC3.52□□□□□ -1.85
CLDN1O95832 SLC31A1P1-201ENST00000451221 567 ntBASIC3.52□□□□□ -1.85
CLDN1O95832 RNU7-125P-201ENST00000458760 62 ntBASIC3.52□□□□□ -1.85
CLDN1O95832 RN7SL585P-201ENST00000470538 280 ntBASIC3.52□□□□□ -1.85
CLDN1O95832 AC112198.1-201ENST00000505369 1220 ntBASIC3.52□□□□□ -1.85
CLDN1O95832 HMGN1P11-201ENST00000508668 303 ntBASIC3.52□□□□□ -1.85
CLDN1O95832 HSPE1P23-201ENST00000509838 286 ntBASIC3.52□□□□□ -1.85
CLDN1O95832 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC3.52□□□□□ -1.85
CLDN1O95832 AC007991.1-201ENST00000522680 631 ntBASIC3.52□□□□□ -1.85
CLDN1O95832 AC135279.1-201ENST00000543493 504 ntBASIC3.52□□□□□ -1.85
CLDN1O95832 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC3.52□□□□□ -1.85
CLDN1O95832 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC3.52□□□□□ -1.85
CLDN1O95832 SULT1C2P1-202ENST00000562418 459 ntBASIC3.52□□□□□ -1.85
CLDN1O95832 AC074051.3-201ENST00000570238 358 ntBASIC3.52□□□□□ -1.85
CLDN1O95832 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC3.52□□□□□ -1.85
CLDN1O95832 AL513477.2-201ENST00000607858 568 ntBASIC3.52□□□□□ -1.85
CLDN1O95832 AC245297.2-201ENST00000610119 565 ntBASIC3.52□□□□□ -1.85
CLDN1O95832 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC3.52□□□□□ -1.85
CLDN1O95832 AL354976.1-201ENST00000613843 387 ntBASIC3.52□□□□□ -1.85
CLDN1O95832 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC3.52□□□□□ -1.85
CLDN1O95832 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
CLDN1O95832 AC103858.2-201ENST00000621471 543 ntBASIC3.52□□□□□ -1.85
CLDN1O95832 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CLDN1O95832 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CLDN1O95832 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CLDN1O95832 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CLDN1O95832 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC3.52□□□□□ -1.85
CLDN1O95832 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CLDN1O95832 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.52□□□□□ -1.85
CLDN1O95832 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.52□□□□□ -1.85
CLDN1O95832 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CLDN1O95832 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
CLDN1O95832 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
CLDN1O95832 AL356489.2-201ENST00000566968 3528 ntBASIC3.52□□□□□ -1.85
CLDN1O95832 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.52□□□□□ -1.85
CLDN1O95832 AC090229.1-201ENST00000590983 1609 ntBASIC3.52□□□□□ -1.85
CLDN1O95832 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CLDN1O95832 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CLDN1O95832 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
CLDN1O95832 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
CLDN1O95832 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
CLDN1O95832 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CLDN1O95832 Y_RNA.25-201ENST00000362528 102 ntBASIC3.51□□□□□ -1.85
CLDN1O95832 RNA5SP267-201ENST00000364893 126 ntBASIC3.51□□□□□ -1.85
CLDN1O95832 SNORD116-1-201ENST00000384335 95 ntBASIC3.51□□□□□ -1.85
CLDN1O95832 Y_RNA.500-201ENST00000384466 111 ntBASIC3.51□□□□□ -1.85
CLDN1O95832 MIR128-1-201ENST00000384921 82 ntBASIC3.51□□□□□ -1.85
CLDN1O95832 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
CLDN1O95832 AC007066.1-201ENST00000392902 381 ntBASIC3.51□□□□□ -1.85
CLDN1O95832 DSTNP4-201ENST00000399472 474 ntBASIC3.51□□□□□ -1.85
CLDN1O95832 SNORA3.3-201ENST00000408712 125 ntBASIC3.51□□□□□ -1.85
CLDN1O95832 AC004022.2-201ENST00000413824 193 ntBASIC3.51□□□□□ -1.85
CLDN1O95832 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.51□□□□□ -1.85
CLDN1O95832 RPS3AP9-201ENST00000417027 792 ntBASIC3.51□□□□□ -1.85
CLDN1O95832 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC3.51□□□□□ -1.85
CLDN1O95832 AC236972.1-201ENST00000433225 199 ntBASIC3.51□□□□□ -1.85
CLDN1O95832 ISCA1P2-201ENST00000438679 421 ntBASIC3.51□□□□□ -1.85
CLDN1O95832 ELOCP8-201ENST00000439309 332 ntBASIC3.51□□□□□ -1.85
CLDN1O95832 RPL23AP89-201ENST00000439324 255 ntBASIC3.51□□□□□ -1.85
CLDN1O95832 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC3.51□□□□□ -1.85
CLDN1O95832 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC3.51□□□□□ -1.85
CLDN1O95832 ELOCP15-201ENST00000442090 332 ntBASIC3.51□□□□□ -1.85
CLDN1O95832 RPS26P56-201ENST00000444468 240 ntBASIC3.51□□□□□ -1.85
CLDN1O95832 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CLDN1O95832 MTND2P19-201ENST00000449129 1012 ntBASIC3.51□□□□□ -1.85
CLDN1O95832 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC3.51□□□□□ -1.85
CLDN1O95832 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC3.51□□□□□ -1.85
CLDN1O95832 RPL18AP17-201ENST00000455326 198 ntBASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms