Protein–RNA interactions for Protein: O95476

CTDNEP1, CTD nuclear envelope phosphatase 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1O95476 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
CTDNEP1O95476 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CTDNEP1O95476 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CTDNEP1O95476 AL157700.1-201ENST00000561973 1432 ntBASIC3.19□□□□□ -1.9
CTDNEP1O95476 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.18□□□□□ -1.9
CTDNEP1O95476 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
CTDNEP1O95476 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC3.18□□□□□ -1.9
CTDNEP1O95476 RNU6-792P-201ENST00000363490 107 ntBASIC3.18□□□□□ -1.9
CTDNEP1O95476 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC3.18□□□□□ -1.9
CTDNEP1O95476 HNRNPDP2-201ENST00000406475 478 ntBASIC3.18□□□□□ -1.9
CTDNEP1O95476 PTGES3P2-201ENST00000407942 482 ntBASIC3.18□□□□□ -1.9
CTDNEP1O95476 SNORD88.1-201ENST00000408684 91 ntBASIC3.18□□□□□ -1.9
CTDNEP1O95476 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC3.18□□□□□ -1.9
CTDNEP1O95476 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC3.18□□□□□ -1.9
CTDNEP1O95476 AL160175.1-201ENST00000428124 247 ntBASIC3.18□□□□□ -1.9
CTDNEP1O95476 MTCO1P43-201ENST00000431831 488 ntBASIC3.18□□□□□ -1.9
CTDNEP1O95476 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC3.18□□□□□ -1.9
CTDNEP1O95476 RPL34P26-201ENST00000445636 354 ntBASIC3.18□□□□□ -1.9
CTDNEP1O95476 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.18□□□□□ -1.9
CTDNEP1O95476 NPM1P49-201ENST00000448027 714 ntBASIC3.18□□□□□ -1.9
CTDNEP1O95476 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC3.18□□□□□ -1.9
CTDNEP1O95476 AC090071.1-201ENST00000507713 644 ntBASIC3.18□□□□□ -1.9
CTDNEP1O95476 AC010468.3-201ENST00000508225 458 ntBASIC3.18□□□□□ -1.9
CTDNEP1O95476 SNORA9.3-201ENST00000516383 129 ntBASIC3.18□□□□□ -1.9
CTDNEP1O95476 SNORA70.24-201ENST00000517233 118 ntBASIC3.18□□□□□ -1.9
CTDNEP1O95476 IGHV3-76-201ENST00000522465 295 ntBASIC3.18□□□□□ -1.9
CTDNEP1O95476 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC3.18□□□□□ -1.9
CTDNEP1O95476 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.18□□□□□ -1.9
CTDNEP1O95476 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC3.18□□□□□ -1.9
CTDNEP1O95476 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC3.18□□□□□ -1.9
CTDNEP1O95476 AC010928.3-201ENST00000587712 541 ntBASIC3.18□□□□□ -1.9
CTDNEP1O95476 AC099778.2-201ENST00000610904 211 ntBASIC3.18□□□□□ -1.9
CTDNEP1O95476 AL445493.3-201ENST00000619568 477 ntBASIC3.18□□□□□ -1.9
CTDNEP1O95476 AC022079.2-201ENST00000619739 566 ntBASIC3.18□□□□□ -1.9
CTDNEP1O95476 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC3.18□□□□□ -1.9
CTDNEP1O95476 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.18□□□□□ -1.9
CTDNEP1O95476 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
CTDNEP1O95476 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.18□□□□□ -1.9
CTDNEP1O95476 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CTDNEP1O95476 ZNF807-201ENST00000328088 1707 ntBASIC3.18□□□□□ -1.9
CTDNEP1O95476 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CTDNEP1O95476 MTND4P31-201ENST00000425607 1343 ntBASIC3.18□□□□□ -1.9
CTDNEP1O95476 AC118273.1-201ENST00000525324 3006 ntBASIC3.17□□□□□ -1.9
CTDNEP1O95476 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
CTDNEP1O95476 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC3.17□□□□□ -1.9
CTDNEP1O95476 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CTDNEP1O95476 RNA5SP295-201ENST00000362655 121 ntBASIC3.17□□□□□ -1.9
CTDNEP1O95476 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC3.17□□□□□ -1.9
CTDNEP1O95476 RNU6-1005P-201ENST00000384519 107 ntBASIC3.17□□□□□ -1.9
CTDNEP1O95476 TAF9BP2-201ENST00000400856 499 ntBASIC3.17□□□□□ -1.9
CTDNEP1O95476 AL138827.1-201ENST00000402666 306 ntBASIC3.17□□□□□ -1.9
CTDNEP1O95476 RN7SKP123-201ENST00000410732 291 ntBASIC3.17□□□□□ -1.9
CTDNEP1O95476 AL645937.1-202ENST00000421799 937 ntBASIC3.17□□□□□ -1.9
CTDNEP1O95476 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC3.17□□□□□ -1.9
CTDNEP1O95476 RPS20P5-201ENST00000434808 360 ntBASIC3.17□□□□□ -1.9
CTDNEP1O95476 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC3.17□□□□□ -1.9
CTDNEP1O95476 SLC31A1P1-201ENST00000451221 567 ntBASIC3.17□□□□□ -1.9
CTDNEP1O95476 AC092754.2-201ENST00000463506 460 ntBASIC3.17□□□□□ -1.9
CTDNEP1O95476 AL049829.1-201ENST00000465411 156 ntBASIC3.17□□□□□ -1.9
CTDNEP1O95476 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC3.17□□□□□ -1.9
CTDNEP1O95476 AC026427.2-201ENST00000506228 536 ntBASIC3.17□□□□□ -1.9
CTDNEP1O95476 AC117522.3-201ENST00000507974 584 ntBASIC3.17□□□□□ -1.9
CTDNEP1O95476 RN7SKP132-201ENST00000516001 208 ntBASIC3.17□□□□□ -1.9
CTDNEP1O95476 RNU6-467P-201ENST00000517027 110 ntBASIC3.17□□□□□ -1.9
CTDNEP1O95476 RNU4-60P-201ENST00000517239 135 ntBASIC3.17□□□□□ -1.9
CTDNEP1O95476 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC3.17□□□□□ -1.9
CTDNEP1O95476 RPL12P22-201ENST00000519073 490 ntBASIC3.17□□□□□ -1.9
CTDNEP1O95476 IGKV2-36-201ENST00000519999 223 ntBASIC3.17□□□□□ -1.9
CTDNEP1O95476 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.17□□□□□ -1.9
CTDNEP1O95476 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CTDNEP1O95476 AP003049.1-201ENST00000529418 457 ntBASIC3.17□□□□□ -1.9
CTDNEP1O95476 AP002812.4-201ENST00000532139 286 ntBASIC3.17□□□□□ -1.9
CTDNEP1O95476 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
CTDNEP1O95476 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CTDNEP1O95476 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC3.17□□□□□ -1.9
CTDNEP1O95476 CENPUP2-201ENST00000555897 1186 ntBASIC3.17□□□□□ -1.9
CTDNEP1O95476 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.17□□□□□ -1.9
CTDNEP1O95476 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC3.17□□□□□ -1.9
CTDNEP1O95476 ZNF92P3-201ENST00000596594 954 ntBASIC3.17□□□□□ -1.9
CTDNEP1O95476 SUMO2P14-201ENST00000604488 293 ntBASIC3.17□□□□□ -1.9
CTDNEP1O95476 AC113194.1-201ENST00000606037 500 ntBASIC3.17□□□□□ -1.9
CTDNEP1O95476 AC092574.1-201ENST00000609771 420 ntBASIC3.17□□□□□ -1.9
CTDNEP1O95476 AC106730.3-201ENST00000624568 641 ntBASIC3.17□□□□□ -1.9
CTDNEP1O95476 AC097372.4-201ENST00000625025 466 ntBASIC3.17□□□□□ -1.9
CTDNEP1O95476 SNORA50A-202ENST00000629536 136 ntBASIC3.17□□□□□ -1.9
CTDNEP1O95476 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.17□□□□□ -1.9
CTDNEP1O95476 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
CTDNEP1O95476 ZNF90P1-201ENST00000480493 1951 ntBASIC3.16□□□□□ -1.9
CTDNEP1O95476 ANKRD36BP1-201ENST00000358576 1779 ntBASIC3.16□□□□□ -1.9
CTDNEP1O95476 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CTDNEP1O95476 RNU6-452P-201ENST00000384406 107 ntBASIC3.16□□□□□ -1.9
CTDNEP1O95476 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC3.16□□□□□ -1.9
CTDNEP1O95476 AL356057.3-201ENST00000402607 340 ntBASIC3.16□□□□□ -1.9
CTDNEP1O95476 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.16□□□□□ -1.9
CTDNEP1O95476 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.16□□□□□ -1.9
CTDNEP1O95476 RNFT1P2-201ENST00000443064 757 ntBASIC3.16□□□□□ -1.9
CTDNEP1O95476 RPL23AP23-201ENST00000452590 471 ntBASIC3.16□□□□□ -1.9
CTDNEP1O95476 RPL23AP31-201ENST00000456160 467 ntBASIC3.16□□□□□ -1.9
CTDNEP1O95476 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.16□□□□□ -1.9
CTDNEP1O95476 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 95.4 ms