Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 RNU4-91P-201ENST00000364778 135 ntBASIC5.76□□□□□ -1.49
RAPGEF3O95398 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC5.76□□□□□ -1.49
RAPGEF3O95398 OR5H15-201ENST00000383696 930 ntBASIC5.76□□□□□ -1.49
RAPGEF3O95398 MIR199A2-201ENST00000385289 110 ntBASIC5.76□□□□□ -1.49
RAPGEF3O95398 RN7SKP142-201ENST00000411236 328 ntBASIC5.76□□□□□ -1.49
RAPGEF3O95398 PRELID3BP11-201ENST00000414230 479 ntBASIC5.76□□□□□ -1.49
RAPGEF3O95398 MTCO2P34-201ENST00000421994 607 ntBASIC5.76□□□□□ -1.49
RAPGEF3O95398 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC5.76□□□□□ -1.49
RAPGEF3O95398 RPS3AP44-201ENST00000425466 790 ntBASIC5.76□□□□□ -1.49
RAPGEF3O95398 OFD1P12Y-201ENST00000427963 1207 ntBASIC5.76□□□□□ -1.49
RAPGEF3O95398 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC5.76□□□□□ -1.49
RAPGEF3O95398 AP000936.2-201ENST00000447151 681 ntBASIC5.76□□□□□ -1.49
RAPGEF3O95398 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC5.76□□□□□ -1.49
RAPGEF3O95398 RAD23BP3-201ENST00000454157 1152 ntBASIC5.76□□□□□ -1.49
RAPGEF3O95398 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.76□□□□□ -1.49
RAPGEF3O95398 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
RAPGEF3O95398 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
RAPGEF3O95398 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC5.76□□□□□ -1.49
RAPGEF3O95398 GNRHR2P1-201ENST00000555315 631 ntBASIC5.76□□□□□ -1.49
RAPGEF3O95398 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC5.76□□□□□ -1.49
RAPGEF3O95398 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC5.76□□□□□ -1.49
RAPGEF3O95398 AGGF1P4-201ENST00000568249 801 ntBASIC5.76□□□□□ -1.49
RAPGEF3O95398 AC007599.1-201ENST00000568688 1174 ntBASIC5.76□□□□□ -1.49
RAPGEF3O95398 AP001094.1-201ENST00000579805 193 ntBASIC5.76□□□□□ -1.49
RAPGEF3O95398 AC010591.1-201ENST00000603941 649 ntBASIC5.76□□□□□ -1.49
RAPGEF3O95398 AL139286.2-201ENST00000606838 396 ntBASIC5.76□□□□□ -1.49
RAPGEF3O95398 AC104073.3-201ENST00000610942 955 ntBASIC5.76□□□□□ -1.49
RAPGEF3O95398 AL359740.1-201ENST00000624340 592 ntBASIC5.76□□□□□ -1.49
RAPGEF3O95398 AC079228.1-201ENST00000624774 1049 ntBASIC5.76□□□□□ -1.49
RAPGEF3O95398 AC092184.1-201ENST00000625042 715 ntBASIC5.76□□□□□ -1.49
RAPGEF3O95398 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC5.76□□□□□ -1.49
RAPGEF3O95398 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
RAPGEF3O95398 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.76□□□□□ -1.49
RAPGEF3O95398 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
RAPGEF3O95398 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
RAPGEF3O95398 AL365440.1-201ENST00000436135 2167 ntBASIC5.76□□□□□ -1.49
RAPGEF3O95398 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
RAPGEF3O95398 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC5.76□□□□□ -1.49
RAPGEF3O95398 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
RAPGEF3O95398 AC007823.1-201ENST00000569932 1566 ntBASIC5.76□□□□□ -1.49
RAPGEF3O95398 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
RAPGEF3O95398 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC5.75□□□□□ -1.49
RAPGEF3O95398 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
RAPGEF3O95398 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
RAPGEF3O95398 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC5.75□□□□□ -1.49
RAPGEF3O95398 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
RAPGEF3O95398 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
RAPGEF3O95398 SNORD9-201ENST00000362566 104 ntBASIC5.75□□□□□ -1.49
RAPGEF3O95398 SNORA68.2-201ENST00000391263 128 ntBASIC5.75□□□□□ -1.49
RAPGEF3O95398 Y_RNA.599-201ENST00000410489 109 ntBASIC5.75□□□□□ -1.49
RAPGEF3O95398 TRAPPC2P10-201ENST00000415662 323 ntBASIC5.75□□□□□ -1.49
RAPGEF3O95398 OFD1P11Y-201ENST00000418213 1177 ntBASIC5.75□□□□□ -1.49
RAPGEF3O95398 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC5.75□□□□□ -1.49
RAPGEF3O95398 AC093698.1-201ENST00000423843 571 ntBASIC5.75□□□□□ -1.49
RAPGEF3O95398 RPS26P47-201ENST00000427219 348 ntBASIC5.75□□□□□ -1.49
RAPGEF3O95398 AC073335.1-201ENST00000427776 363 ntBASIC5.75□□□□□ -1.49
RAPGEF3O95398 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC5.75□□□□□ -1.49
RAPGEF3O95398 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC5.75□□□□□ -1.49
RAPGEF3O95398 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC5.75□□□□□ -1.49
RAPGEF3O95398 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC5.75□□□□□ -1.49
RAPGEF3O95398 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC5.75□□□□□ -1.49
RAPGEF3O95398 AP002963.1-201ENST00000530590 184 ntBASIC5.75□□□□□ -1.49
RAPGEF3O95398 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC5.75□□□□□ -1.49
RAPGEF3O95398 AC006272.2-201ENST00000594725 163 ntBASIC5.75□□□□□ -1.49
RAPGEF3O95398 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC5.75□□□□□ -1.49
RAPGEF3O95398 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC5.75□□□□□ -1.49
RAPGEF3O95398 AC010680.3-201ENST00000604215 520 ntBASIC5.75□□□□□ -1.49
RAPGEF3O95398 AC087752.4-201ENST00000605911 462 ntBASIC5.75□□□□□ -1.49
RAPGEF3O95398 AC123768.4-201ENST00000616244 701 ntBASIC5.75□□□□□ -1.49
RAPGEF3O95398 AC092192.1-201ENST00000633154 1018 ntBASIC5.75□□□□□ -1.49
RAPGEF3O95398 XPOTP1-201ENST00000443317 2398 ntBASIC5.75□□□□□ -1.49
RAPGEF3O95398 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
RAPGEF3O95398 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
RAPGEF3O95398 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.75□□□□□ -1.49
RAPGEF3O95398 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC5.75□□□□□ -1.49
RAPGEF3O95398 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
RAPGEF3O95398 Z95331.1-201ENST00000623075 23112 ntBASIC5.74□□□□□ -1.49
RAPGEF3O95398 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC5.74□□□□□ -1.49
RAPGEF3O95398 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
RAPGEF3O95398 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC5.74□□□□□ -1.49
RAPGEF3O95398 SNORD96B-201ENST00000386148 79 ntBASIC5.74□□□□□ -1.49
RAPGEF3O95398 AL663109.1-201ENST00000411498 844 ntBASIC5.74□□□□□ -1.49
RAPGEF3O95398 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC5.74□□□□□ -1.49
RAPGEF3O95398 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC5.74□□□□□ -1.49
RAPGEF3O95398 AL953862.1-201ENST00000423016 168 ntBASIC5.74□□□□□ -1.49
RAPGEF3O95398 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC5.74□□□□□ -1.49
RAPGEF3O95398 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC5.74□□□□□ -1.49
RAPGEF3O95398 MTND4P6-201ENST00000438297 472 ntBASIC5.74□□□□□ -1.49
RAPGEF3O95398 AL831737.1-201ENST00000441288 271 ntBASIC5.74□□□□□ -1.49
RAPGEF3O95398 TRIM60P18-201ENST00000441518 828 ntBASIC5.74□□□□□ -1.49
RAPGEF3O95398 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC5.74□□□□□ -1.49
RAPGEF3O95398 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC5.74□□□□□ -1.49
RAPGEF3O95398 SNORD105B-201ENST00000458770 79 ntBASIC5.74□□□□□ -1.49
RAPGEF3O95398 RPL21P10-201ENST00000463521 490 ntBASIC5.74□□□□□ -1.49
RAPGEF3O95398 AC004069.2-201ENST00000505438 1114 ntBASIC5.74□□□□□ -1.49
RAPGEF3O95398 CBX3P3-201ENST00000508108 532 ntBASIC5.74□□□□□ -1.49
RAPGEF3O95398 IGKV2-38-201ENST00000517443 247 ntBASIC5.74□□□□□ -1.49
RAPGEF3O95398 DEFB131D-201ENST00000526803 184 ntBASIC5.74□□□□□ -1.49
RAPGEF3O95398 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
RAPGEF3O95398 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC5.74□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms