Protein–RNA interactions for Protein: O95343

SIX3, Homeobox protein SIX3, humanhuman

Predicted RBP Predictions only

Length 332 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3O95343 AC092447.6-201ENST00000414578 210 ntBASIC3.71□□□□□ -1.82
SIX3O95343 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC3.71□□□□□ -1.82
SIX3O95343 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
SIX3O95343 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC3.71□□□□□ -1.82
SIX3O95343 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
SIX3O95343 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.71□□□□□ -1.82
SIX3O95343 MTND4LP10-201ENST00000435146 291 ntBASIC3.71□□□□□ -1.82
SIX3O95343 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
SIX3O95343 HMGB1P12-201ENST00000438594 598 ntBASIC3.71□□□□□ -1.82
SIX3O95343 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.71□□□□□ -1.82
SIX3O95343 PTENP1-201ENST00000447117 1215 ntBASIC3.71□□□□□ -1.82
SIX3O95343 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC3.71□□□□□ -1.82
SIX3O95343 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC3.71□□□□□ -1.82
SIX3O95343 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC3.71□□□□□ -1.82
SIX3O95343 DNAJC19P1-201ENST00000455312 319 ntBASIC3.71□□□□□ -1.82
SIX3O95343 AC114981.1-201ENST00000503897 678 ntBASIC3.71□□□□□ -1.82
SIX3O95343 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.71□□□□□ -1.82
SIX3O95343 AC109445.1-201ENST00000512356 383 ntBASIC3.71□□□□□ -1.82
SIX3O95343 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC3.71□□□□□ -1.82
SIX3O95343 RN7SKP31-201ENST00000516354 278 ntBASIC3.71□□□□□ -1.82
SIX3O95343 RN7SKP289-201ENST00000517244 295 ntBASIC3.71□□□□□ -1.82
SIX3O95343 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC3.71□□□□□ -1.82
SIX3O95343 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.71□□□□□ -1.82
SIX3O95343 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC3.71□□□□□ -1.82
SIX3O95343 AL132857.1-201ENST00000555180 708 ntBASIC3.71□□□□□ -1.82
SIX3O95343 AL512347.1-201ENST00000566420 503 ntBASIC3.71□□□□□ -1.82
SIX3O95343 AC080013.4-201ENST00000607624 649 ntBASIC3.71□□□□□ -1.82
SIX3O95343 AC109809.1-201ENST00000619665 545 ntBASIC3.71□□□□□ -1.82
SIX3O95343 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
SIX3O95343 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.71□□□□□ -1.82
SIX3O95343 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
SIX3O95343 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.71□□□□□ -1.82
SIX3O95343 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.71□□□□□ -1.82
SIX3O95343 OR5BR1P-201ENST00000524992 1330 ntBASIC3.7□□□□□ -1.82
SIX3O95343 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.7□□□□□ -1.82
SIX3O95343 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC3.7□□□□□ -1.82
SIX3O95343 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
SIX3O95343 AC004944.1-201ENST00000517807 3059 ntBASIC3.7□□□□□ -1.82
SIX3O95343 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.7□□□□□ -1.82
SIX3O95343 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.7□□□□□ -1.82
SIX3O95343 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.7□□□□□ -1.82
SIX3O95343 MIR372-201ENST00000362225 67 ntBASIC3.7□□□□□ -1.82
SIX3O95343 RNA5SP97-201ENST00000365006 84 ntBASIC3.7□□□□□ -1.82
SIX3O95343 RNU6-906P-201ENST00000384700 70 ntBASIC3.7□□□□□ -1.82
SIX3O95343 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC3.7□□□□□ -1.82
SIX3O95343 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
SIX3O95343 RNU6-584P-201ENST00000410350 95 ntBASIC3.7□□□□□ -1.82
SIX3O95343 Z92545.1-201ENST00000411782 234 ntBASIC3.7□□□□□ -1.82
SIX3O95343 MTATP6P27-201ENST00000416987 621 ntBASIC3.7□□□□□ -1.82
SIX3O95343 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC3.7□□□□□ -1.82
SIX3O95343 AL049610.1-201ENST00000423374 372 ntBASIC3.7□□□□□ -1.82
SIX3O95343 ZDHHC20P2-201ENST00000424108 429 ntBASIC3.7□□□□□ -1.82
SIX3O95343 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.7□□□□□ -1.82
SIX3O95343 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.7□□□□□ -1.82
SIX3O95343 MTND2P19-201ENST00000449129 1012 ntBASIC3.7□□□□□ -1.82
SIX3O95343 AL009048.1-201ENST00000450437 298 ntBASIC3.7□□□□□ -1.82
SIX3O95343 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.7□□□□□ -1.82
SIX3O95343 RPL12P26-201ENST00000452430 487 ntBASIC3.7□□□□□ -1.82
SIX3O95343 RPS24P6-201ENST00000452670 400 ntBASIC3.7□□□□□ -1.82
SIX3O95343 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC3.7□□□□□ -1.82
SIX3O95343 RPS4XP10-201ENST00000465034 731 ntBASIC3.7□□□□□ -1.82
SIX3O95343 RPS27AP1-201ENST00000475545 471 ntBASIC3.7□□□□□ -1.82
SIX3O95343 AC106872.2-201ENST00000494303 480 ntBASIC3.7□□□□□ -1.82
SIX3O95343 MTCYBP17-201ENST00000503579 789 ntBASIC3.7□□□□□ -1.82
SIX3O95343 XKRY-201ENST00000510392 1100 ntBASIC3.7□□□□□ -1.82
SIX3O95343 FTH1P21-201ENST00000512179 511 ntBASIC3.7□□□□□ -1.82
SIX3O95343 RNU6-583P-201ENST00000516012 92 ntBASIC3.7□□□□□ -1.82
SIX3O95343 RNU6-352P-201ENST00000516908 107 ntBASIC3.7□□□□□ -1.82
SIX3O95343 SNORA70.24-201ENST00000517233 118 ntBASIC3.7□□□□□ -1.82
SIX3O95343 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC3.7□□□□□ -1.82
SIX3O95343 RGS5-218ENST00000526176 574 ntTSL 4 BASIC3.7□□□□□ -1.82
SIX3O95343 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC3.7□□□□□ -1.82
SIX3O95343 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC3.7□□□□□ -1.82
SIX3O95343 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.7□□□□□ -1.82
SIX3O95343 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC3.7□□□□□ -1.82
SIX3O95343 MIR5186-201ENST00000577504 120 ntBASIC3.7□□□□□ -1.82
SIX3O95343 MIR3690-201ENST00000580266 75 ntBASIC3.7□□□□□ -1.82
SIX3O95343 MTND3P19-201ENST00000603825 345 ntBASIC3.7□□□□□ -1.82
SIX3O95343 AL451074.6-201ENST00000608512 729 ntBASIC3.7□□□□□ -1.82
SIX3O95343 AF117829.1-206ENST00000621883 3802 ntBASIC3.7□□□□□ -1.82
SIX3O95343 CRYM-AS1-204ENST00000637983 556 ntBASIC3.7□□□□□ -1.82
SIX3O95343 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC3.7□□□□□ -1.82
SIX3O95343 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
SIX3O95343 CR381670.1-201ENST00000624291 1693 ntBASIC3.7□□□□□ -1.82
SIX3O95343 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.7□□□□□ -1.82
SIX3O95343 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
SIX3O95343 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
SIX3O95343 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
SIX3O95343 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
SIX3O95343 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
SIX3O95343 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
SIX3O95343 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
SIX3O95343 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
SIX3O95343 AL049780.3-201ENST00000624612 1583 ntBASIC3.69□□□□□ -1.82
SIX3O95343 AC024560.2-201ENST00000507981 1497 ntBASIC3.69□□□□□ -1.82
SIX3O95343 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
SIX3O95343 SNORD51-201ENST00000384320 80 ntBASIC3.69□□□□□ -1.82
SIX3O95343 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC3.69□□□□□ -1.82
SIX3O95343 AL450338.1-201ENST00000407987 512 ntBASIC3.69□□□□□ -1.82
SIX3O95343 RN7SKP159-201ENST00000410657 292 ntBASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 170.8 ms