Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC4.21□□□□□ -1.74
RTN3O95197 AC010099.3-201ENST00000423896 409 ntBASIC4.21□□□□□ -1.74
RTN3O95197 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC4.21□□□□□ -1.74
RTN3O95197 HSPE1P28-201ENST00000443139 211 ntBASIC4.21□□□□□ -1.74
RTN3O95197 NPM1P49-201ENST00000448027 714 ntBASIC4.21□□□□□ -1.74
RTN3O95197 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC4.21□□□□□ -1.74
RTN3O95197 AC005297.2-201ENST00000450430 606 ntBASIC4.21□□□□□ -1.74
RTN3O95197 RPS11P1-201ENST00000451072 473 ntBASIC4.21□□□□□ -1.74
RTN3O95197 USP9YP10-201ENST00000454868 628 ntBASIC4.21□□□□□ -1.74
RTN3O95197 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
RTN3O95197 NAA50-206ENST00000493454 964 ntTSL 2 BASIC4.21□□□□□ -1.74
RTN3O95197 RPL7P47-201ENST00000497299 556 ntBASIC4.21□□□□□ -1.74
RTN3O95197 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC4.21□□□□□ -1.74
RTN3O95197 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC4.21□□□□□ -1.74
RTN3O95197 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC4.21□□□□□ -1.74
RTN3O95197 AC093853.1-201ENST00000515689 483 ntBASIC4.21□□□□□ -1.74
RTN3O95197 Y_RNA.717-201ENST00000517106 92 ntBASIC4.21□□□□□ -1.74
RTN3O95197 IGKV3OR22-2-201ENST00000517943 313 ntBASIC4.21□□□□□ -1.74
RTN3O95197 MTCYBP41-201ENST00000528913 1123 ntBASIC4.21□□□□□ -1.74
RTN3O95197 ERP27-202ENST00000540097 993 ntTSL 2 BASIC4.21□□□□□ -1.74
RTN3O95197 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC4.21□□□□□ -1.74
RTN3O95197 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC4.21□□□□□ -1.74
RTN3O95197 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC4.21□□□□□ -1.74
RTN3O95197 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC4.21□□□□□ -1.74
RTN3O95197 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC4.21□□□□□ -1.74
RTN3O95197 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC4.21□□□□□ -1.74
RTN3O95197 AC053481.3-201ENST00000577881 843 ntBASIC4.21□□□□□ -1.74
RTN3O95197 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC4.21□□□□□ -1.74
RTN3O95197 VN1R78P-201ENST00000597393 564 ntBASIC4.21□□□□□ -1.74
RTN3O95197 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC4.21□□□□□ -1.74
RTN3O95197 AC010738.1-201ENST00000604970 987 ntBASIC4.21□□□□□ -1.74
RTN3O95197 AC128687.1-201ENST00000605304 619 ntBASIC4.21□□□□□ -1.74
RTN3O95197 AC055876.5-201ENST00000605667 259 ntBASIC4.21□□□□□ -1.74
RTN3O95197 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC4.21□□□□□ -1.74
RTN3O95197 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC4.21□□□□□ -1.74
RTN3O95197 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC4.21□□□□□ -1.74
RTN3O95197 AC244517.1-201ENST00000606030 2086 ntBASIC4.21□□□□□ -1.74
RTN3O95197 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.21□□□□□ -1.74
RTN3O95197 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.21□□□□□ -1.74
RTN3O95197 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
RTN3O95197 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
RTN3O95197 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
RTN3O95197 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.2□□□□□ -1.74
RTN3O95197 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.2□□□□□ -1.74
RTN3O95197 PTER-201ENST00000298942 3448 ntTSL 5 BASIC4.2□□□□□ -1.74
RTN3O95197 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
RTN3O95197 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.2□□□□□ -1.74
RTN3O95197 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
RTN3O95197 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC4.2□□□□□ -1.74
RTN3O95197 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC4.2□□□□□ -1.74
RTN3O95197 DDX43P2-201ENST00000604753 1354 ntBASIC4.2□□□□□ -1.74
RTN3O95197 RPL23AP57-201ENST00000332361 466 ntBASIC4.2□□□□□ -1.74
RTN3O95197 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
RTN3O95197 RNU6-1214P-201ENST00000363650 109 ntBASIC4.2□□□□□ -1.74
RTN3O95197 RNA5SP189-201ENST00000364920 115 ntBASIC4.2□□□□□ -1.74
RTN3O95197 SNORD6-201ENST00000365444 73 ntBASIC4.2□□□□□ -1.74
RTN3O95197 AC119751.3-201ENST00000399720 670 ntBASIC4.2□□□□□ -1.74
RTN3O95197 TRBV24OR9-2-201ENST00000416632 435 ntBASIC4.2□□□□□ -1.74
RTN3O95197 MTATP6P27-201ENST00000416987 621 ntBASIC4.2□□□□□ -1.74
RTN3O95197 RPL21P112-201ENST00000434403 463 ntBASIC4.2□□□□□ -1.74
RTN3O95197 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC4.2□□□□□ -1.74
RTN3O95197 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC4.2□□□□□ -1.74
RTN3O95197 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.2□□□□□ -1.74
RTN3O95197 HMGB1P25-201ENST00000468402 607 ntBASIC4.2□□□□□ -1.74
RTN3O95197 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
RTN3O95197 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC4.2□□□□□ -1.74
RTN3O95197 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC4.2□□□□□ -1.74
RTN3O95197 AC006390.1-201ENST00000508068 283 ntBASIC4.2□□□□□ -1.74
RTN3O95197 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC4.2□□□□□ -1.74
RTN3O95197 AC093281.2-201ENST00000510153 597 ntBASIC4.2□□□□□ -1.74
RTN3O95197 SNORA3.4-201ENST00000515969 96 ntBASIC4.2□□□□□ -1.74
RTN3O95197 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
RTN3O95197 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC4.2□□□□□ -1.74
RTN3O95197 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC4.2□□□□□ -1.74
RTN3O95197 AP004242.1-201ENST00000533701 349 ntBASIC4.2□□□□□ -1.74
RTN3O95197 AC023538.1-201ENST00000534576 736 ntBASIC4.2□□□□□ -1.74
RTN3O95197 AC024224.1-201ENST00000538284 609 ntBASIC4.2□□□□□ -1.74
RTN3O95197 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC4.2□□□□□ -1.74
RTN3O95197 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC4.2□□□□□ -1.74
RTN3O95197 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC4.2□□□□□ -1.74
RTN3O95197 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC4.2□□□□□ -1.74
RTN3O95197 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC4.2□□□□□ -1.74
RTN3O95197 RN7SL703P-201ENST00000578485 302 ntBASIC4.2□□□□□ -1.74
RTN3O95197 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC4.2□□□□□ -1.74
RTN3O95197 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC4.2□□□□□ -1.74
RTN3O95197 AL031281.1-201ENST00000604049 488 ntBASIC4.2□□□□□ -1.74
RTN3O95197 AC009159.2-201ENST00000617603 606 ntBASIC4.2□□□□□ -1.74
RTN3O95197 AL713922.2-201ENST00000619384 716 ntBASIC4.2□□□□□ -1.74
RTN3O95197 AC018755.4-201ENST00000619715 454 ntBASIC4.2□□□□□ -1.74
RTN3O95197 AL139089.1-201ENST00000620372 975 ntBASIC4.2□□□□□ -1.74
RTN3O95197 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.2□□□□□ -1.74
RTN3O95197 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
RTN3O95197 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.2□□□□□ -1.74
RTN3O95197 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.2□□□□□ -1.74
RTN3O95197 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
RTN3O95197 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC4.2□□□□□ -1.74
RTN3O95197 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.19□□□□□ -1.74
RTN3O95197 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.19□□□□□ -1.74
RTN3O95197 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC4.19□□□□□ -1.74
RTN3O95197 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms