Protein–RNA interactions for Protein: O75161

NPHP4, Nephrocystin-4, humanhuman

Predicted RBP Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4O75161 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC3.66□□□□□ -1.82
NPHP4O75161 AC119751.1-201ENST00000513357 765 ntBASIC3.66□□□□□ -1.82
NPHP4O75161 SNORA70.14-201ENST00000516205 110 ntBASIC3.66□□□□□ -1.82
NPHP4O75161 RNA5SP380-201ENST00000517190 98 ntBASIC3.66□□□□□ -1.82
NPHP4O75161 AC090819.1-201ENST00000523800 1111 ntBASIC3.66□□□□□ -1.82
NPHP4O75161 RGS4-209ENST00000531057 544 ntTSL 4 BASIC3.66□□□□□ -1.82
NPHP4O75161 AC025260.1-201ENST00000548858 430 ntBASIC3.66□□□□□ -1.82
NPHP4O75161 MIR4635-201ENST00000583759 79 ntBASIC3.66□□□□□ -1.82
NPHP4O75161 DLEU2_6.1-201ENST00000610536 112 ntBASIC3.66□□□□□ -1.82
NPHP4O75161 AC123768.4-201ENST00000616244 701 ntBASIC3.66□□□□□ -1.82
NPHP4O75161 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.66□□□□□ -1.82
NPHP4O75161 OR4G2P-202ENST00000641004 1759 ntBASIC3.66□□□□□ -1.82
NPHP4O75161 AC007336.1-201ENST00000576365 3828 ntBASIC3.65□□□□□ -1.82
NPHP4O75161 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
NPHP4O75161 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
NPHP4O75161 RNU1-73P-201ENST00000383971 164 ntBASIC3.65□□□□□ -1.83
NPHP4O75161 RPL21P3-201ENST00000395517 478 ntBASIC3.65□□□□□ -1.83
NPHP4O75161 RPL31P1-201ENST00000398116 372 ntBASIC3.65□□□□□ -1.83
NPHP4O75161 MTCO3P31-201ENST00000405526 789 ntBASIC3.65□□□□□ -1.83
NPHP4O75161 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.65□□□□□ -1.83
NPHP4O75161 YPEL5P1-201ENST00000419731 367 ntBASIC3.65□□□□□ -1.83
NPHP4O75161 NANOGP5-201ENST00000424456 877 ntBASIC3.65□□□□□ -1.83
NPHP4O75161 ELOCP10-201ENST00000440624 327 ntBASIC3.65□□□□□ -1.83
NPHP4O75161 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC3.65□□□□□ -1.83
NPHP4O75161 AC146507.2-201ENST00000460608 476 ntBASIC3.65□□□□□ -1.83
NPHP4O75161 AC034244.2-201ENST00000514668 858 ntBASIC3.65□□□□□ -1.83
NPHP4O75161 RN7SKP31-201ENST00000516354 278 ntBASIC3.65□□□□□ -1.83
NPHP4O75161 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC3.65□□□□□ -1.83
NPHP4O75161 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC3.65□□□□□ -1.83
NPHP4O75161 CNOT6LP1-201ENST00000559681 1462 ntBASIC3.65□□□□□ -1.83
NPHP4O75161 ELOCP34-201ENST00000604436 327 ntBASIC3.65□□□□□ -1.83
NPHP4O75161 AC016727.1-205ENST00000605437 569 ntBASIC3.65□□□□□ -1.83
NPHP4O75161 AC090115.4-201ENST00000609970 188 ntBASIC3.65□□□□□ -1.83
NPHP4O75161 AL590410.1-201ENST00000617925 333 ntBASIC3.65□□□□□ -1.83
NPHP4O75161 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
NPHP4O75161 AC092881.1-201ENST00000638218 2733 ntBASIC3.64□□□□□ -1.83
NPHP4O75161 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC3.64□□□□□ -1.83
NPHP4O75161 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
NPHP4O75161 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC3.64□□□□□ -1.83
NPHP4O75161 AC096638.1-201ENST00000444678 216 ntBASIC3.64□□□□□ -1.83
NPHP4O75161 BUD31P2-201ENST00000449374 300 ntBASIC3.64□□□□□ -1.83
NPHP4O75161 CLIC4P1-201ENST00000453177 535 ntBASIC3.64□□□□□ -1.83
NPHP4O75161 RN7SKP282-201ENST00000516824 299 ntBASIC3.64□□□□□ -1.83
NPHP4O75161 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC3.64□□□□□ -1.83
NPHP4O75161 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC3.64□□□□□ -1.83
NPHP4O75161 AC017076.1-201ENST00000607613 578 ntBASIC3.64□□□□□ -1.83
NPHP4O75161 AL353997.5-201ENST00000618886 171 ntBASIC3.64□□□□□ -1.83
NPHP4O75161 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC3.64□□□□□ -1.83
NPHP4O75161 AC092159.4-201ENST00000624944 550 ntBASIC3.64□□□□□ -1.83
NPHP4O75161 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.64□□□□□ -1.83
NPHP4O75161 BX005019.1-201ENST00000561881 1810 ntBASIC3.64□□□□□ -1.83
NPHP4O75161 AC090229.1-201ENST00000590983 1609 ntBASIC3.64□□□□□ -1.83
NPHP4O75161 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
NPHP4O75161 ZNF542P-204ENST00000482727 1305 ntBASIC3.63□□□□□ -1.83
NPHP4O75161 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC3.63□□□□□ -1.83
NPHP4O75161 BTF3P7-201ENST00000407097 488 ntBASIC3.63□□□□□ -1.83
NPHP4O75161 AC007064.1-201ENST00000412238 351 ntBASIC3.63□□□□□ -1.83
NPHP4O75161 AC132942.1-201ENST00000486753 483 ntBASIC3.63□□□□□ -1.83
NPHP4O75161 AC008716.1-201ENST00000511084 513 ntBASIC3.63□□□□□ -1.83
NPHP4O75161 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC3.63□□□□□ -1.83
NPHP4O75161 AC067904.2-201ENST00000517322 1283 ntBASIC3.63□□□□□ -1.83
NPHP4O75161 AL389895.1-201ENST00000554127 252 ntBASIC3.63□□□□□ -1.83
NPHP4O75161 AC068446.3-201ENST00000555285 382 ntBASIC3.63□□□□□ -1.83
NPHP4O75161 CASC16-202ENST00000563844 610 ntTSL 3 BASIC3.63□□□□□ -1.83
NPHP4O75161 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC3.63□□□□□ -1.83
NPHP4O75161 AC084373.1-201ENST00000603311 235 ntBASIC3.63□□□□□ -1.83
NPHP4O75161 AC145207.9-201ENST00000623802 325 ntBASIC3.63□□□□□ -1.83
NPHP4O75161 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.63□□□□□ -1.83
NPHP4O75161 AC066616.2-201ENST00000559334 1481 ntBASIC3.63□□□□□ -1.83
NPHP4O75161 Y_RNA.226-201ENST00000364337 114 ntBASIC3.62□□□□□ -1.83
NPHP4O75161 RNU6-253P-201ENST00000384730 105 ntBASIC3.62□□□□□ -1.83
NPHP4O75161 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.62□□□□□ -1.83
NPHP4O75161 AL662791.1-201ENST00000441992 928 ntBASIC3.62□□□□□ -1.83
NPHP4O75161 RPL23AP44-201ENST00000482216 473 ntBASIC3.62□□□□□ -1.83
NPHP4O75161 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
NPHP4O75161 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.62□□□□□ -1.83
NPHP4O75161 VN1R79P-201ENST00000593540 513 ntBASIC3.62□□□□□ -1.83
NPHP4O75161 AC010200.2-201ENST00000605098 235 ntBASIC3.62□□□□□ -1.83
NPHP4O75161 AC004696.1-201ENST00000614345 607 ntBASIC3.62□□□□□ -1.83
NPHP4O75161 AC107905.1-201ENST00000616204 426 ntBASIC3.62□□□□□ -1.83
NPHP4O75161 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC3.62□□□□□ -1.83
NPHP4O75161 MIR6715B-201ENST00000637172 77 ntBASIC3.62□□□□□ -1.83
NPHP4O75161 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
NPHP4O75161 AC087565.3-202ENST00000642085 1603 ntBASIC3.62□□□□□ -1.83
NPHP4O75161 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
NPHP4O75161 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.62□□□□□ -1.83
NPHP4O75161 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.62□□□□□ -1.83
NPHP4O75161 RNU6-891P-201ENST00000384280 111 ntBASIC3.61□□□□□ -1.83
NPHP4O75161 AL359511.1-201ENST00000402970 211 ntBASIC3.61□□□□□ -1.83
NPHP4O75161 VTA1P1-201ENST00000414044 866 ntBASIC3.61□□□□□ -1.83
NPHP4O75161 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
NPHP4O75161 SEC63P1-201ENST00000425785 1258 ntBASIC3.61□□□□□ -1.83
NPHP4O75161 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC3.61□□□□□ -1.83
NPHP4O75161 AL354710.1-201ENST00000453641 246 ntBASIC3.61□□□□□ -1.83
NPHP4O75161 RPL21P41-201ENST00000459863 264 ntBASIC3.61□□□□□ -1.83
NPHP4O75161 RPL5P13-201ENST00000462840 709 ntBASIC3.61□□□□□ -1.83
NPHP4O75161 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC3.61□□□□□ -1.83
NPHP4O75161 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC3.61□□□□□ -1.83
NPHP4O75161 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC3.61□□□□□ -1.83
NPHP4O75161 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms