Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
SHOX2O60902 AL355836.1-201ENST00000555951 870 ntBASIC3.03□□□□□ -1.92
SHOX2O60902 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC3.03□□□□□ -1.92
SHOX2O60902 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC3.03□□□□□ -1.92
SHOX2O60902 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.03□□□□□ -1.92
SHOX2O60902 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.03□□□□□ -1.92
SHOX2O60902 AC090115.4-201ENST00000609970 188 ntBASIC3.03□□□□□ -1.92
SHOX2O60902 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.03□□□□□ -1.92
SHOX2O60902 MIR3651-201ENST00000630427 90 ntBASIC3.03□□□□□ -1.92
SHOX2O60902 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC3.03□□□□□ -1.92
SHOX2O60902 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC3.03□□□□□ -1.92
SHOX2O60902 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.03□□□□□ -1.92
SHOX2O60902 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.93
SHOX2O60902 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.02□□□□□ -1.93
SHOX2O60902 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
SHOX2O60902 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC3.02□□□□□ -1.93
SHOX2O60902 AL512646.1-201ENST00000269395 1077 ntBASIC3.02□□□□□ -1.93
SHOX2O60902 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
SHOX2O60902 RNU2-71P-201ENST00000411395 189 ntBASIC3.02□□□□□ -1.93
SHOX2O60902 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC3.02□□□□□ -1.93
SHOX2O60902 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC3.02□□□□□ -1.93
SHOX2O60902 AC005517.2-201ENST00000424673 553 ntBASIC3.02□□□□□ -1.93
SHOX2O60902 UBE2V1P1-201ENST00000430836 445 ntBASIC3.02□□□□□ -1.93
SHOX2O60902 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC3.02□□□□□ -1.93
SHOX2O60902 PTP4A1P3-201ENST00000433661 420 ntBASIC3.02□□□□□ -1.93
SHOX2O60902 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC3.02□□□□□ -1.93
SHOX2O60902 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC3.02□□□□□ -1.93
SHOX2O60902 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC3.02□□□□□ -1.93
SHOX2O60902 OR6K1P-201ENST00000456766 971 ntBASIC3.02□□□□□ -1.93
SHOX2O60902 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.02□□□□□ -1.93
SHOX2O60902 AC008155.2-201ENST00000464337 397 ntBASIC3.02□□□□□ -1.93
SHOX2O60902 AC090525.1-201ENST00000479116 478 ntBASIC3.02□□□□□ -1.93
SHOX2O60902 AC106707.2-201ENST00000484182 374 ntBASIC3.02□□□□□ -1.93
SHOX2O60902 AC010486.1-201ENST00000511793 424 ntBASIC3.02□□□□□ -1.93
SHOX2O60902 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
SHOX2O60902 RN7SKP57-201ENST00000517248 293 ntBASIC3.02□□□□□ -1.93
SHOX2O60902 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC3.02□□□□□ -1.93
SHOX2O60902 OR5B10P-201ENST00000532869 642 ntBASIC3.02□□□□□ -1.93
SHOX2O60902 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC3.02□□□□□ -1.93
SHOX2O60902 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.02□□□□□ -1.93
SHOX2O60902 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.02□□□□□ -1.93
SHOX2O60902 MIR3945-201ENST00000581853 98 ntBASIC3.02□□□□□ -1.93
SHOX2O60902 ELOCP35-201ENST00000604289 336 ntBASIC3.02□□□□□ -1.93
SHOX2O60902 AC073657.2-201ENST00000605661 303 ntBASIC3.02□□□□□ -1.93
SHOX2O60902 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC3.02□□□□□ -1.93
SHOX2O60902 CR589904.2-201ENST00000612533 440 ntBASIC3.02□□□□□ -1.93
SHOX2O60902 MIR7975-201ENST00000619350 68 ntBASIC3.02□□□□□ -1.93
SHOX2O60902 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC3.02□□□□□ -1.93
SHOX2O60902 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC3.02□□□□□ -1.93
SHOX2O60902 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
SHOX2O60902 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
SHOX2O60902 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.02□□□□□ -1.93
SHOX2O60902 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.01□□□□□ -1.93
SHOX2O60902 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
SHOX2O60902 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC3.01□□□□□ -1.93
SHOX2O60902 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
SHOX2O60902 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
SHOX2O60902 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
SHOX2O60902 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
SHOX2O60902 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
SHOX2O60902 RNU1-35P-201ENST00000362782 153 ntBASIC3.01□□□□□ -1.93
SHOX2O60902 SNORA51.12-201ENST00000384448 134 ntBASIC3.01□□□□□ -1.93
SHOX2O60902 SNORA48.2-201ENST00000390926 124 ntBASIC3.01□□□□□ -1.93
SHOX2O60902 AL589655.1-201ENST00000405398 482 ntBASIC3.01□□□□□ -1.93
SHOX2O60902 RPL7P8-201ENST00000411964 730 ntBASIC3.01□□□□□ -1.93
SHOX2O60902 AC104332.2-201ENST00000429959 156 ntBASIC3.01□□□□□ -1.93
SHOX2O60902 HSPD1P21-201ENST00000436541 245 ntBASIC3.01□□□□□ -1.93
SHOX2O60902 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC3.01□□□□□ -1.93
SHOX2O60902 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
SHOX2O60902 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC3.01□□□□□ -1.93
SHOX2O60902 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC3.01□□□□□ -1.93
SHOX2O60902 Y_RNA.638-201ENST00000459374 113 ntBASIC3.01□□□□□ -1.93
SHOX2O60902 AC012181.1-201ENST00000479895 423 ntBASIC3.01□□□□□ -1.93
SHOX2O60902 RPL32P34-201ENST00000486380 400 ntBASIC3.01□□□□□ -1.93
SHOX2O60902 HMGB1P38-201ENST00000490557 577 ntBASIC3.01□□□□□ -1.93
SHOX2O60902 RPL23AP55-201ENST00000498163 452 ntBASIC3.01□□□□□ -1.93
SHOX2O60902 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
SHOX2O60902 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC3.01□□□□□ -1.93
SHOX2O60902 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC3.01□□□□□ -1.93
SHOX2O60902 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC3.01□□□□□ -1.93
SHOX2O60902 AC016065.2-201ENST00000514530 444 ntBASIC3.01□□□□□ -1.93
SHOX2O60902 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.01□□□□□ -1.93
SHOX2O60902 LY96-202ENST00000518893 430 ntTSL 3 BASIC3.01□□□□□ -1.93
SHOX2O60902 HAUS1P3-201ENST00000523909 662 ntBASIC3.01□□□□□ -1.93
SHOX2O60902 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.01□□□□□ -1.93
SHOX2O60902 NOP56P3-201ENST00000549457 385 ntBASIC3.01□□□□□ -1.93
SHOX2O60902 HIGD1AP1-201ENST00000550979 275 ntBASIC3.01□□□□□ -1.93
SHOX2O60902 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.01□□□□□ -1.93
SHOX2O60902 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.01□□□□□ -1.93
SHOX2O60902 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.01□□□□□ -1.93
SHOX2O60902 AC007566.2-201ENST00000603642 413 ntBASIC3.01□□□□□ -1.93
SHOX2O60902 IGHV3-29-201ENST00000604817 344 ntBASIC3.01□□□□□ -1.93
SHOX2O60902 AL137843.1-201ENST00000605078 385 ntBASIC3.01□□□□□ -1.93
SHOX2O60902 AC015849.2-201ENST00000605738 409 ntBASIC3.01□□□□□ -1.93
SHOX2O60902 AC007318.2-201ENST00000620999 243 ntBASIC3.01□□□□□ -1.93
SHOX2O60902 AC243312.2-201ENST00000623340 601 ntBASIC3.01□□□□□ -1.93
SHOX2O60902 AL034408.1-202ENST00000636088 415 ntBASIC3.01□□□□□ -1.93
SHOX2O60902 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
SHOX2O60902 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.01□□□□□ -1.93
SHOX2O60902 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 118.8 ms