Protein–RNA interactions for Protein: O60548

FOXD2, Forkhead box protein D2, humanhuman

Predicted RBP Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD2O60548 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
FOXD2O60548 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
FOXD2O60548 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
FOXD2O60548 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.07□□□□□ -1.6
FOXD2O60548 AC100778.3-201ENST00000580060 1750 ntBASIC5.07□□□□□ -1.6
FOXD2O60548 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
FOXD2O60548 GDI2P1-201ENST00000429312 1336 ntBASIC5.07□□□□□ -1.6
FOXD2O60548 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
FOXD2O60548 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC5.07□□□□□ -1.6
FOXD2O60548 Y_RNA.126-201ENST00000363382 111 ntBASIC5.07□□□□□ -1.6
FOXD2O60548 UBBP2-201ENST00000376781 231 ntBASIC5.07□□□□□ -1.6
FOXD2O60548 RNU6-1062P-201ENST00000383908 107 ntBASIC5.07□□□□□ -1.6
FOXD2O60548 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
FOXD2O60548 RNA5SP332-201ENST00000391063 115 ntBASIC5.07□□□□□ -1.6
FOXD2O60548 MIR1193-201ENST00000408109 78 ntBASIC5.07□□□□□ -1.6
FOXD2O60548 RNU6ATAC34P-201ENST00000408879 121 ntBASIC5.07□□□□□ -1.6
FOXD2O60548 PIGFP2-201ENST00000421400 651 ntBASIC5.07□□□□□ -1.6
FOXD2O60548 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC5.07□□□□□ -1.6
FOXD2O60548 AL513175.1-201ENST00000431492 780 ntBASIC5.07□□□□□ -1.6
FOXD2O60548 RPL34P6-201ENST00000432390 345 ntBASIC5.07□□□□□ -1.6
FOXD2O60548 RPS24P13-201ENST00000442520 397 ntBASIC5.07□□□□□ -1.6
FOXD2O60548 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC5.07□□□□□ -1.6
FOXD2O60548 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC5.07□□□□□ -1.6
FOXD2O60548 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC5.07□□□□□ -1.6
FOXD2O60548 AL354714.3-201ENST00000447284 493 ntBASIC5.07□□□□□ -1.6
FOXD2O60548 AL157827.1-201ENST00000447622 132 ntBASIC5.07□□□□□ -1.6
FOXD2O60548 PRPF38AP1-201ENST00000451976 933 ntBASIC5.07□□□□□ -1.6
FOXD2O60548 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.07□□□□□ -1.6
FOXD2O60548 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC5.07□□□□□ -1.6
FOXD2O60548 AL133244.1-201ENST00000456007 258 ntBASIC5.07□□□□□ -1.6
FOXD2O60548 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC5.07□□□□□ -1.6
FOXD2O60548 RPL23AP37-201ENST00000479658 549 ntBASIC5.07□□□□□ -1.6
FOXD2O60548 AC083829.1-201ENST00000503756 657 ntBASIC5.07□□□□□ -1.6
FOXD2O60548 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC5.07□□□□□ -1.6
FOXD2O60548 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC5.07□□□□□ -1.6
FOXD2O60548 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC5.07□□□□□ -1.6
FOXD2O60548 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC5.07□□□□□ -1.6
FOXD2O60548 RN7SKP21-201ENST00000516503 220 ntBASIC5.07□□□□□ -1.6
FOXD2O60548 snoU109.6-201ENST00000516831 118 ntBASIC5.07□□□□□ -1.6
FOXD2O60548 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC5.07□□□□□ -1.6
FOXD2O60548 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC5.07□□□□□ -1.6
FOXD2O60548 PHBP17-201ENST00000528576 541 ntBASIC5.07□□□□□ -1.6
FOXD2O60548 AP000889.2-201ENST00000532684 490 ntBASIC5.07□□□□□ -1.6
FOXD2O60548 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC5.07□□□□□ -1.6
FOXD2O60548 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC5.07□□□□□ -1.6
FOXD2O60548 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC5.07□□□□□ -1.6
FOXD2O60548 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
FOXD2O60548 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC5.07□□□□□ -1.6
FOXD2O60548 NIFKP8-201ENST00000560500 874 ntBASIC5.07□□□□□ -1.6
FOXD2O60548 AC055876.1-202ENST00000567053 138 ntBASIC5.07□□□□□ -1.6
FOXD2O60548 MYL12BP1-201ENST00000569826 507 ntBASIC5.07□□□□□ -1.6
FOXD2O60548 PRPF19P1-201ENST00000584766 898 ntBASIC5.07□□□□□ -1.6
FOXD2O60548 DPPA3P3-201ENST00000603842 430 ntBASIC5.07□□□□□ -1.6
FOXD2O60548 AL627309.6-201ENST00000606857 840 ntBASIC5.07□□□□□ -1.6
FOXD2O60548 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC5.07□□□□□ -1.6
FOXD2O60548 AC137590.2-201ENST00000619709 240 ntBASIC5.07□□□□□ -1.6
FOXD2O60548 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC5.07□□□□□ -1.6
FOXD2O60548 AC138649.5-201ENST00000637456 137 ntBASIC5.07□□□□□ -1.6
FOXD2O60548 AC073869.8-201ENST00000641806 335 ntBASIC5.07□□□□□ -1.6
FOXD2O60548 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
FOXD2O60548 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
FOXD2O60548 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
FOXD2O60548 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC5.07□□□□□ -1.6
FOXD2O60548 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
FOXD2O60548 AL445437.1-201ENST00000623157 3087 ntBASIC5.07□□□□□ -1.6
FOXD2O60548 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
FOXD2O60548 AP000756.2-201ENST00000624168 2567 ntBASIC5.07□□□□□ -1.6
FOXD2O60548 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
FOXD2O60548 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
FOXD2O60548 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.06□□□□□ -1.6
FOXD2O60548 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
FOXD2O60548 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC5.06□□□□□ -1.6
FOXD2O60548 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
FOXD2O60548 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
FOXD2O60548 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
FOXD2O60548 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
FOXD2O60548 Y_RNA.47-201ENST00000362697 108 ntBASIC5.06□□□□□ -1.6
FOXD2O60548 RNA5SP90-201ENST00000364801 99 ntBASIC5.06□□□□□ -1.6
FOXD2O60548 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
FOXD2O60548 SNORD116-29-201ENST00000384516 83 ntBASIC5.06□□□□□ -1.6
FOXD2O60548 AC025750.1-201ENST00000399891 379 ntBASIC5.06□□□□□ -1.6
FOXD2O60548 MTND3P8-201ENST00000412909 339 ntBASIC5.06□□□□□ -1.6
FOXD2O60548 NAP1L1P2-201ENST00000414182 1089 ntBASIC5.06□□□□□ -1.6
FOXD2O60548 COX5BP7-201ENST00000414780 274 ntBASIC5.06□□□□□ -1.6
FOXD2O60548 BX510359.2-201ENST00000417920 305 ntBASIC5.06□□□□□ -1.6
FOXD2O60548 AC004690.1-201ENST00000418216 328 ntBASIC5.06□□□□□ -1.6
FOXD2O60548 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC5.06□□□□□ -1.6
FOXD2O60548 RPL36AP53-201ENST00000432891 316 ntBASIC5.06□□□□□ -1.6
FOXD2O60548 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC5.06□□□□□ -1.6
FOXD2O60548 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC5.06□□□□□ -1.6
FOXD2O60548 AC023512.1-201ENST00000444513 499 ntBASIC5.06□□□□□ -1.6
FOXD2O60548 AC132479.1-201ENST00000449160 144 ntBASIC5.06□□□□□ -1.6
FOXD2O60548 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC5.06□□□□□ -1.6
FOXD2O60548 AC022133.1-201ENST00000490961 571 ntBASIC5.06□□□□□ -1.6
FOXD2O60548 KLHL2P1-201ENST00000508691 521 ntBASIC5.06□□□□□ -1.6
FOXD2O60548 AC016559.2-201ENST00000510759 359 ntBASIC5.06□□□□□ -1.6
FOXD2O60548 RNU6-835P-201ENST00000516974 104 ntBASIC5.06□□□□□ -1.6
FOXD2O60548 RNU6-388P-201ENST00000517012 105 ntBASIC5.06□□□□□ -1.6
FOXD2O60548 RNU6-389P-201ENST00000517048 105 ntBASIC5.06□□□□□ -1.6
FOXD2O60548 AC022360.1-201ENST00000521058 340 ntBASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 92.4 ms