Protein–RNA interactions for Protein: O60264

SMARCA5, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5, humanhuman

Predicted RBP Predictions only

Length 1,052 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5O60264 AC124947.2-202ENST00000552735 133 ntBASIC5.64□□□□□ -1.51
SMARCA5O60264 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC5.64□□□□□ -1.51
SMARCA5O60264 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC5.64□□□□□ -1.51
SMARCA5O60264 AC103792.1-201ENST00000603591 919 ntBASIC5.64□□□□□ -1.51
SMARCA5O60264 AC025449.1-201ENST00000603896 529 ntBASIC5.64□□□□□ -1.51
SMARCA5O60264 AL161616.1-201ENST00000611867 286 ntBASIC5.64□□□□□ -1.51
SMARCA5O60264 CR381653.2-201ENST00000624041 768 ntBASIC5.64□□□□□ -1.51
SMARCA5O60264 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC5.64□□□□□ -1.51
SMARCA5O60264 CRYM-AS1-204ENST00000637983 556 ntBASIC5.64□□□□□ -1.51
SMARCA5O60264 AC108751.5-201ENST00000492880 1336 ntBASIC5.64□□□□□ -1.51
SMARCA5O60264 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
SMARCA5O60264 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
SMARCA5O60264 RNA5SP505-201ENST00000364748 108 ntBASIC5.63□□□□□ -1.51
SMARCA5O60264 MIR298-201ENST00000401212 88 ntBASIC5.63□□□□□ -1.51
SMARCA5O60264 MIR1305-201ENST00000408300 86 ntBASIC5.63□□□□□ -1.51
SMARCA5O60264 AC138393.2-201ENST00000414742 246 ntBASIC5.63□□□□□ -1.51
SMARCA5O60264 EI24P1-201ENST00000416584 867 ntBASIC5.63□□□□□ -1.51
SMARCA5O60264 AC244098.2-201ENST00000422068 99 ntBASIC5.63□□□□□ -1.51
SMARCA5O60264 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC5.63□□□□□ -1.51
SMARCA5O60264 AC000111.3-201ENST00000433478 193 ntBASIC5.63□□□□□ -1.51
SMARCA5O60264 AC011753.3-201ENST00000443436 406 ntBASIC5.63□□□□□ -1.51
SMARCA5O60264 AC002381.1-201ENST00000447049 280 ntBASIC5.63□□□□□ -1.51
SMARCA5O60264 AL118496.2-201ENST00000448300 230 ntBASIC5.63□□□□□ -1.51
SMARCA5O60264 snoU13.8-201ENST00000458890 104 ntBASIC5.63□□□□□ -1.51
SMARCA5O60264 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC5.63□□□□□ -1.51
SMARCA5O60264 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC5.63□□□□□ -1.51
SMARCA5O60264 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC5.63□□□□□ -1.51
SMARCA5O60264 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC5.63□□□□□ -1.51
SMARCA5O60264 POU5F1P7-201ENST00000508759 541 ntBASIC5.63□□□□□ -1.51
SMARCA5O60264 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC5.63□□□□□ -1.51
SMARCA5O60264 RN7SKP298-201ENST00000515950 94 ntBASIC5.63□□□□□ -1.51
SMARCA5O60264 OR5AP1P-201ENST00000529730 940 ntBASIC5.63□□□□□ -1.51
SMARCA5O60264 OR4P1P-201ENST00000530808 1136 ntBASIC5.63□□□□□ -1.51
SMARCA5O60264 AC024224.1-201ENST00000538284 609 ntBASIC5.63□□□□□ -1.51
SMARCA5O60264 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC5.63□□□□□ -1.51
SMARCA5O60264 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC5.63□□□□□ -1.51
SMARCA5O60264 RN7SL690P-201ENST00000582087 240 ntBASIC5.63□□□□□ -1.51
SMARCA5O60264 AP001004.1-201ENST00000582468 324 ntBASIC5.63□□□□□ -1.51
SMARCA5O60264 AC112187.2-201ENST00000604345 283 ntBASIC5.63□□□□□ -1.51
SMARCA5O60264 AC011816.2-201ENST00000607089 556 ntBASIC5.63□□□□□ -1.51
SMARCA5O60264 MIR6730-201ENST00000622213 67 ntBASIC5.63□□□□□ -1.51
SMARCA5O60264 ZNF137P-201ENST00000456718 1920 ntBASIC5.63□□□□□ -1.51
SMARCA5O60264 EEF1A1P42-201ENST00000613436 1331 ntBASIC5.63□□□□□ -1.51
SMARCA5O60264 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SMARCA5O60264 AC244517.1-201ENST00000606030 2086 ntBASIC5.63□□□□□ -1.51
SMARCA5O60264 DHX40P1-201ENST00000588725 1412 ntBASIC5.63□□□□□ -1.51
SMARCA5O60264 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SMARCA5O60264 AC108467.2-201ENST00000617640 1597 ntBASIC5.63□□□□□ -1.51
SMARCA5O60264 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
SMARCA5O60264 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SMARCA5O60264 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SMARCA5O60264 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC5.62□□□□□ -1.51
SMARCA5O60264 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.62□□□□□ -1.51
SMARCA5O60264 MFSD8-216ENST00000641147 4009 ntBASIC5.62□□□□□ -1.51
SMARCA5O60264 PNPT1P2-201ENST00000456768 2050 ntBASIC5.62□□□□□ -1.51
SMARCA5O60264 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SMARCA5O60264 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
SMARCA5O60264 AC008033.1-201ENST00000216407 1162 ntBASIC5.62□□□□□ -1.51
SMARCA5O60264 RNU6-263P-201ENST00000363811 107 ntBASIC5.62□□□□□ -1.51
SMARCA5O60264 SNORA70F-201ENST00000384142 135 ntBASIC5.62□□□□□ -1.51
SMARCA5O60264 AC007066.1-201ENST00000392902 381 ntBASIC5.62□□□□□ -1.51
SMARCA5O60264 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
SMARCA5O60264 CYB5AP4-201ENST00000396692 399 ntBASIC5.62□□□□□ -1.51
SMARCA5O60264 RNU4-78P-201ENST00000410940 126 ntBASIC5.62□□□□□ -1.51
SMARCA5O60264 AC092832.1-201ENST00000422934 400 ntBASIC5.62□□□□□ -1.51
SMARCA5O60264 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC5.62□□□□□ -1.51
SMARCA5O60264 BTF3P10-201ENST00000433415 495 ntBASIC5.62□□□□□ -1.51
SMARCA5O60264 AL831737.1-201ENST00000441288 271 ntBASIC5.62□□□□□ -1.51
SMARCA5O60264 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC5.62□□□□□ -1.51
SMARCA5O60264 AC112653.1-201ENST00000443851 386 ntBASIC5.62□□□□□ -1.51
SMARCA5O60264 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC5.62□□□□□ -1.51
SMARCA5O60264 Z99127.3-201ENST00000448158 395 ntBASIC5.62□□□□□ -1.51
SMARCA5O60264 AC073264.2-201ENST00000448886 166 ntBASIC5.62□□□□□ -1.51
SMARCA5O60264 RPL7P52-201ENST00000449200 742 ntBASIC5.62□□□□□ -1.51
SMARCA5O60264 UBDP1-202ENST00000457888 382 ntBASIC5.62□□□□□ -1.51
SMARCA5O60264 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC5.62□□□□□ -1.51
SMARCA5O60264 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC5.62□□□□□ -1.51
SMARCA5O60264 AC093267.1-201ENST00000489176 961 ntBASIC5.62□□□□□ -1.51
SMARCA5O60264 RPL23AP72-201ENST00000492447 435 ntBASIC5.62□□□□□ -1.51
SMARCA5O60264 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC5.62□□□□□ -1.51
SMARCA5O60264 AC022447.3-201ENST00000506865 495 ntBASIC5.62□□□□□ -1.51
SMARCA5O60264 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC5.62□□□□□ -1.51
SMARCA5O60264 CARD16-203ENST00000525374 503 ntTSL 3 BASIC5.62□□□□□ -1.51
SMARCA5O60264 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC5.62□□□□□ -1.51
SMARCA5O60264 SMILR-201ENST00000533992 553 ntTSL 4 BASIC5.62□□□□□ -1.51
SMARCA5O60264 AP006289.1-201ENST00000538089 277 ntBASIC5.62□□□□□ -1.51
SMARCA5O60264 RAB11AP2-201ENST00000545905 639 ntBASIC5.62□□□□□ -1.51
SMARCA5O60264 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC5.62□□□□□ -1.51
SMARCA5O60264 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC5.62□□□□□ -1.51
SMARCA5O60264 AC005730.3-201ENST00000583067 366 ntBASIC5.62□□□□□ -1.51
SMARCA5O60264 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC5.62□□□□□ -1.51
SMARCA5O60264 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC5.62□□□□□ -1.51
SMARCA5O60264 AL133338.2-201ENST00000604292 736 ntBASIC5.62□□□□□ -1.51
SMARCA5O60264 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SMARCA5O60264 AL022154.1-201ENST00000604698 785 ntBASIC5.62□□□□□ -1.51
SMARCA5O60264 AL365503.1-201ENST00000605247 905 ntBASIC5.62□□□□□ -1.51
SMARCA5O60264 AL121757.2-201ENST00000611223 313 ntBASIC5.62□□□□□ -1.51
SMARCA5O60264 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SMARCA5O60264 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SMARCA5O60264 AC104260.1-201ENST00000616660 539 ntBASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 91.9 ms