Protein–RNA interactions for Protein: O00479

HMGN4, High mobility group nucleosome-binding domain-containing protein 4, humanhuman

Predictions only

Length 90 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4O00479 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
HMGN4O00479 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC2.18□□□□□ -2.06
HMGN4O00479 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC2.18□□□□□ -2.06
HMGN4O00479 AC092638.1-201ENST00000411966 1275 ntBASIC2.18□□□□□ -2.06
HMGN4O00479 RAP1BP1-201ENST00000412709 553 ntBASIC2.18□□□□□ -2.06
HMGN4O00479 MTCO1P39-201ENST00000426148 480 ntBASIC2.18□□□□□ -2.06
HMGN4O00479 RNF19BPX-201ENST00000426224 625 ntBASIC2.18□□□□□ -2.06
HMGN4O00479 MTCO1P43-201ENST00000431831 488 ntBASIC2.18□□□□□ -2.06
HMGN4O00479 RPS7P5-201ENST00000441482 581 ntBASIC2.18□□□□□ -2.06
HMGN4O00479 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC2.18□□□□□ -2.06
HMGN4O00479 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC2.18□□□□□ -2.06
HMGN4O00479 AC004924.1-201ENST00000480160 781 ntBASIC2.18□□□□□ -2.06
HMGN4O00479 AC090543.1-201ENST00000492168 485 ntBASIC2.18□□□□□ -2.06
HMGN4O00479 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
HMGN4O00479 AC090071.1-201ENST00000507713 644 ntBASIC2.18□□□□□ -2.06
HMGN4O00479 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
HMGN4O00479 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC2.18□□□□□ -2.06
HMGN4O00479 RPL7P20-201ENST00000520308 745 ntBASIC2.18□□□□□ -2.06
HMGN4O00479 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC2.18□□□□□ -2.06
HMGN4O00479 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC2.18□□□□□ -2.06
HMGN4O00479 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC2.18□□□□□ -2.06
HMGN4O00479 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC2.18□□□□□ -2.06
HMGN4O00479 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC2.18□□□□□ -2.06
HMGN4O00479 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC2.18□□□□□ -2.06
HMGN4O00479 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC2.18□□□□□ -2.06
HMGN4O00479 LINC02341-201ENST00000637043 824 ntTSL 3 BASIC2.18□□□□□ -2.06
HMGN4O00479 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC2.18□□□□□ -2.06
HMGN4O00479 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
HMGN4O00479 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
HMGN4O00479 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.17□□□□□ -2.06
HMGN4O00479 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
HMGN4O00479 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
HMGN4O00479 SNORA31-201ENST00000362607 130 ntBASIC2.17□□□□□ -2.06
HMGN4O00479 SNORA5B-201ENST00000363786 132 ntBASIC2.17□□□□□ -2.06
HMGN4O00479 CRP-202ENST00000368110 667 ntTSL 3 BASIC2.17□□□□□ -2.06
HMGN4O00479 AL139095.1-201ENST00000404326 391 ntBASIC2.17□□□□□ -2.06
HMGN4O00479 SSR1P1-201ENST00000407630 814 ntBASIC2.17□□□□□ -2.06
HMGN4O00479 U3.37-201ENST00000408528 213 ntBASIC2.17□□□□□ -2.06
HMGN4O00479 RN7SKP140-201ENST00000411196 284 ntBASIC2.17□□□□□ -2.06
HMGN4O00479 MTND2P16-201ENST00000419987 799 ntBASIC2.17□□□□□ -2.06
HMGN4O00479 DPPA2P1-201ENST00000428060 556 ntBASIC2.17□□□□□ -2.06
HMGN4O00479 HNRNPDLP3-201ENST00000456745 380 ntBASIC2.17□□□□□ -2.06
HMGN4O00479 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC2.17□□□□□ -2.06
HMGN4O00479 XKRY-201ENST00000510392 1100 ntBASIC2.17□□□□□ -2.06
HMGN4O00479 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.17□□□□□ -2.06
HMGN4O00479 AC025881.1-201ENST00000518851 512 ntBASIC2.17□□□□□ -2.06
HMGN4O00479 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC2.17□□□□□ -2.06
HMGN4O00479 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC2.17□□□□□ -2.06
HMGN4O00479 AC021269.2-201ENST00000532318 330 ntBASIC2.17□□□□□ -2.06
HMGN4O00479 AC027176.1-201ENST00000560204 514 ntBASIC2.17□□□□□ -2.06
HMGN4O00479 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.17□□□□□ -2.06
HMGN4O00479 AC234778.2-201ENST00000566241 354 ntBASIC2.17□□□□□ -2.06
HMGN4O00479 AC005951.1-201ENST00000576706 485 ntBASIC2.17□□□□□ -2.06
HMGN4O00479 BNIP3P22-201ENST00000593399 556 ntBASIC2.17□□□□□ -2.06
HMGN4O00479 AC091488.1-201ENST00000604239 660 ntBASIC2.17□□□□□ -2.06
HMGN4O00479 AL137843.1-201ENST00000605078 385 ntBASIC2.17□□□□□ -2.06
HMGN4O00479 AC046143.2-201ENST00000609789 160 ntBASIC2.17□□□□□ -2.06
HMGN4O00479 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.17□□□□□ -2.06
HMGN4O00479 AP003485.2-201ENST00000623636 610 ntBASIC2.17□□□□□ -2.06
HMGN4O00479 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
HMGN4O00479 AL118496.1-201ENST00000440201 1812 ntBASIC2.17□□□□□ -2.06
HMGN4O00479 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.16□□□□□ -2.06
HMGN4O00479 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
HMGN4O00479 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.16□□□□□ -2.06
HMGN4O00479 OR5H15-201ENST00000383696 930 ntBASIC2.16□□□□□ -2.06
HMGN4O00479 RNU1-138P-201ENST00000384093 164 ntBASIC2.16□□□□□ -2.06
HMGN4O00479 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.16□□□□□ -2.06
HMGN4O00479 AL096701.2-201ENST00000416920 238 ntBASIC2.16□□□□□ -2.06
HMGN4O00479 AC009963.1-201ENST00000417265 157 ntBASIC2.16□□□□□ -2.06
HMGN4O00479 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC2.16□□□□□ -2.06
HMGN4O00479 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC2.16□□□□□ -2.06
HMGN4O00479 NANOGP5-201ENST00000424456 877 ntBASIC2.16□□□□□ -2.06
HMGN4O00479 AC005517.2-201ENST00000424673 553 ntBASIC2.16□□□□□ -2.06
HMGN4O00479 RPS15AP28-201ENST00000435088 386 ntBASIC2.16□□□□□ -2.06
HMGN4O00479 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC2.16□□□□□ -2.06
HMGN4O00479 TRBV26-201ENST00000456572 344 ntBASIC2.16□□□□□ -2.06
HMGN4O00479 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.16□□□□□ -2.06
HMGN4O00479 AC005912.1-201ENST00000495392 255 ntBASIC2.16□□□□□ -2.06
HMGN4O00479 AC234781.5-201ENST00000508429 271 ntBASIC2.16□□□□□ -2.06
HMGN4O00479 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.16□□□□□ -2.06
HMGN4O00479 AC010735.1-201ENST00000567305 1026 ntBASIC2.16□□□□□ -2.06
HMGN4O00479 AC105137.2-201ENST00000569073 466 ntBASIC2.16□□□□□ -2.06
HMGN4O00479 AC010928.3-201ENST00000587712 541 ntBASIC2.16□□□□□ -2.06
HMGN4O00479 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC2.16□□□□□ -2.06
HMGN4O00479 NRBF2P5-201ENST00000603087 788 ntBASIC2.16□□□□□ -2.06
HMGN4O00479 RPL23AP92-201ENST00000603609 255 ntBASIC2.16□□□□□ -2.06
HMGN4O00479 AC006023.1-201ENST00000603944 259 ntBASIC2.16□□□□□ -2.06
HMGN4O00479 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC2.16□□□□□ -2.06
HMGN4O00479 AC131902.3-201ENST00000611767 581 ntBASIC2.16□□□□□ -2.06
HMGN4O00479 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.16□□□□□ -2.06
HMGN4O00479 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.16□□□□□ -2.06
HMGN4O00479 BANCR-201ENST00000624238 473 ntTSL 2 BASIC2.16□□□□□ -2.06
HMGN4O00479 AL160394.1-201ENST00000624765 724 ntBASIC2.16□□□□□ -2.06
HMGN4O00479 CR392039.4-201ENST00000624968 501 ntBASIC2.16□□□□□ -2.06
HMGN4O00479 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.16□□□□□ -2.06
HMGN4O00479 AC110792.3-201ENST00000595906 1614 ntBASIC2.16□□□□□ -2.06
HMGN4O00479 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.15□□□□□ -2.06
HMGN4O00479 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC2.15□□□□□ -2.06
HMGN4O00479 API5P2-201ENST00000397055 1498 ntBASIC2.15□□□□□ -2.06
HMGN4O00479 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.15□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 126.8 ms