Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 RPS29P17-201ENST00000430795 166 ntBASIC4.57□□□□□ -1.68
FOXN3O00409 AC011998.1-201ENST00000433403 117 ntBASIC4.57□□□□□ -1.68
FOXN3O00409 RPL37P21-201ENST00000435890 276 ntBASIC4.57□□□□□ -1.68
FOXN3O00409 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC4.57□□□□□ -1.68
FOXN3O00409 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC4.57□□□□□ -1.68
FOXN3O00409 RPL5P32-201ENST00000454085 879 ntBASIC4.57□□□□□ -1.68
FOXN3O00409 NDUFA12P1-201ENST00000455914 406 ntBASIC4.57□□□□□ -1.68
FOXN3O00409 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC4.57□□□□□ -1.68
FOXN3O00409 RNU6-956P-201ENST00000458868 103 ntBASIC4.57□□□□□ -1.68
FOXN3O00409 snoU13.1-201ENST00000459157 104 ntBASIC4.57□□□□□ -1.68
FOXN3O00409 RPS29P22-201ENST00000472363 168 ntBASIC4.57□□□□□ -1.68
FOXN3O00409 AP000797.1-201ENST00000478870 387 ntBASIC4.57□□□□□ -1.68
FOXN3O00409 MTCO3P7-201ENST00000510008 774 ntBASIC4.57□□□□□ -1.68
FOXN3O00409 AC006499.6-201ENST00000511169 607 ntBASIC4.57□□□□□ -1.68
FOXN3O00409 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC4.57□□□□□ -1.68
FOXN3O00409 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC4.57□□□□□ -1.68
FOXN3O00409 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC4.57□□□□□ -1.68
FOXN3O00409 AC090615.1-201ENST00000577519 154 ntBASIC4.57□□□□□ -1.68
FOXN3O00409 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC4.57□□□□□ -1.68
FOXN3O00409 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.57□□□□□ -1.68
FOXN3O00409 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC4.57□□□□□ -1.68
FOXN3O00409 AC234771.5-201ENST00000600161 514 ntBASIC4.57□□□□□ -1.68
FOXN3O00409 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
FOXN3O00409 AC068276.1-201ENST00000605793 379 ntBASIC4.57□□□□□ -1.68
FOXN3O00409 AC004492.1-201ENST00000607036 742 ntBASIC4.57□□□□□ -1.68
FOXN3O00409 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.57□□□□□ -1.68
FOXN3O00409 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
FOXN3O00409 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC4.57□□□□□ -1.68
FOXN3O00409 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
FOXN3O00409 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
FOXN3O00409 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC4.57□□□□□ -1.68
FOXN3O00409 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.57□□□□□ -1.68
FOXN3O00409 AC140479.6-201ENST00000633535 357 ntBASIC4.57□□□□□ -1.68
FOXN3O00409 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
FOXN3O00409 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.57□□□□□ -1.68
FOXN3O00409 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.57□□□□□ -1.68
FOXN3O00409 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
FOXN3O00409 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.57□□□□□ -1.68
FOXN3O00409 AL158163.1-201ENST00000603915 1649 ntBASIC4.57□□□□□ -1.68
FOXN3O00409 MTCO1P24-201ENST00000515438 1558 ntBASIC4.57□□□□□ -1.68
FOXN3O00409 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC4.57□□□□□ -1.68
FOXN3O00409 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
FOXN3O00409 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.56□□□□□ -1.68
FOXN3O00409 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.56□□□□□ -1.68
FOXN3O00409 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
FOXN3O00409 AC007685.1-201ENST00000329806 452 ntBASIC4.56□□□□□ -1.68
FOXN3O00409 Y_RNA.97-201ENST00000363094 102 ntBASIC4.56□□□□□ -1.68
FOXN3O00409 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
FOXN3O00409 U3.22-201ENST00000391120 215 ntBASIC4.56□□□□□ -1.68
FOXN3O00409 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
FOXN3O00409 AL356421.1-201ENST00000403255 413 ntBASIC4.56□□□□□ -1.68
FOXN3O00409 LAP3P1-201ENST00000403648 294 ntBASIC4.56□□□□□ -1.68
FOXN3O00409 RNA5SP36-201ENST00000410197 133 ntBASIC4.56□□□□□ -1.68
FOXN3O00409 RN7SKP235-201ENST00000410662 305 ntBASIC4.56□□□□□ -1.68
FOXN3O00409 ELOCP19-201ENST00000411919 318 ntBASIC4.56□□□□□ -1.68
FOXN3O00409 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC4.56□□□□□ -1.68
FOXN3O00409 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC4.56□□□□□ -1.68
FOXN3O00409 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC4.56□□□□□ -1.68
FOXN3O00409 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.56□□□□□ -1.68
FOXN3O00409 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC4.56□□□□□ -1.68
FOXN3O00409 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC4.56□□□□□ -1.68
FOXN3O00409 MTCO2P3-201ENST00000442543 421 ntBASIC4.56□□□□□ -1.68
FOXN3O00409 AP000542.1-201ENST00000448473 371 ntBASIC4.56□□□□□ -1.68
FOXN3O00409 snoU13.8-201ENST00000458890 104 ntBASIC4.56□□□□□ -1.68
FOXN3O00409 AC013356.1-201ENST00000489027 564 ntBASIC4.56□□□□□ -1.68
FOXN3O00409 BNIP3P41-201ENST00000503774 571 ntBASIC4.56□□□□□ -1.68
FOXN3O00409 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC4.56□□□□□ -1.68
FOXN3O00409 Vault.1-201ENST00000516474 102 ntBASIC4.56□□□□□ -1.68
FOXN3O00409 RNA5SP73-201ENST00000516744 108 ntBASIC4.56□□□□□ -1.68
FOXN3O00409 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC4.56□□□□□ -1.68
FOXN3O00409 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC4.56□□□□□ -1.68
FOXN3O00409 ZDHHC20P3-201ENST00000531576 336 ntBASIC4.56□□□□□ -1.68
FOXN3O00409 TOMM20P2-201ENST00000540082 421 ntBASIC4.56□□□□□ -1.68
FOXN3O00409 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC4.56□□□□□ -1.68
FOXN3O00409 OR6C73P-201ENST00000546432 358 ntBASIC4.56□□□□□ -1.68
FOXN3O00409 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC4.56□□□□□ -1.68
FOXN3O00409 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC4.56□□□□□ -1.68
FOXN3O00409 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC4.56□□□□□ -1.68
FOXN3O00409 AC012065.4-201ENST00000602445 679 ntBASIC4.56□□□□□ -1.68
FOXN3O00409 AL355812.1-201ENST00000603215 216 ntBASIC4.56□□□□□ -1.68
FOXN3O00409 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.56□□□□□ -1.68
FOXN3O00409 AC064801.1-201ENST00000612025 407 ntBASIC4.56□□□□□ -1.68
FOXN3O00409 RN7SL722P-201ENST00000617780 284 ntBASIC4.56□□□□□ -1.68
FOXN3O00409 RN7SL565P-201ENST00000618246 284 ntBASIC4.56□□□□□ -1.68
FOXN3O00409 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
FOXN3O00409 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
FOXN3O00409 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.56□□□□□ -1.68
FOXN3O00409 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
FOXN3O00409 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
FOXN3O00409 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
FOXN3O00409 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.56□□□□□ -1.68
FOXN3O00409 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC4.56□□□□□ -1.68
FOXN3O00409 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.55□□□□□ -1.68
FOXN3O00409 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.55□□□□□ -1.68
FOXN3O00409 AC006971.1-201ENST00000407916 4486 ntBASIC4.55□□□□□ -1.68
FOXN3O00409 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
FOXN3O00409 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
FOXN3O00409 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.55□□□□□ -1.68
FOXN3O00409 OR11H4-201ENST00000315409 1082 ntBASIC4.55□□□□□ -1.68
FOXN3O00409 AL161781.1-201ENST00000354277 403 ntBASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms