Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC3.83□□□□□ -1.8
O00370 FCF1P2-201ENST00000415284 583 ntBASIC3.83□□□□□ -1.8
O00370 CRYBB2P1-203ENST00000415709 538 ntBASIC3.83□□□□□ -1.8
O00370 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC3.83□□□□□ -1.8
O00370 MRPS36P1-201ENST00000421291 307 ntBASIC3.83□□□□□ -1.8
O00370 OFD1P2Y-201ENST00000421895 1149 ntBASIC3.83□□□□□ -1.8
O00370 AL513174.1-201ENST00000423182 629 ntBASIC3.83□□□□□ -1.8
O00370 AC233981.1-201ENST00000423224 461 ntBASIC3.83□□□□□ -1.8
O00370 Z93242.1-201ENST00000427102 353 ntBASIC3.83□□□□□ -1.8
O00370 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.83□□□□□ -1.8
O00370 GTF2IP7-202ENST00000436677 309 ntBASIC3.83□□□□□ -1.8
O00370 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
O00370 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC3.83□□□□□ -1.8
O00370 HMGB3P8-201ENST00000449709 577 ntBASIC3.83□□□□□ -1.8
O00370 SUN3-208ENST00000453192 801 ntTSL 5 BASIC3.83□□□□□ -1.8
O00370 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC3.83□□□□□ -1.8
O00370 SETP14-201ENST00000497538 873 ntBASIC3.83□□□□□ -1.8
O00370 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC3.83□□□□□ -1.8
O00370 TRMT10BP1-201ENST00000519377 943 ntBASIC3.83□□□□□ -1.8
O00370 MTND4P33-201ENST00000556706 766 ntBASIC3.83□□□□□ -1.8
O00370 AC107954.1-201ENST00000565906 727 ntBASIC3.83□□□□□ -1.8
O00370 AC093519.1-201ENST00000566109 298 ntBASIC3.83□□□□□ -1.8
O00370 MIR4429-201ENST00000580105 73 ntBASIC3.83□□□□□ -1.8
O00370 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.83□□□□□ -1.8
O00370 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC3.83□□□□□ -1.8
O00370 AC091057.2-201ENST00000602594 792 ntBASIC3.83□□□□□ -1.8
O00370 GAS5-AS1-201ENST00000602767 694 ntBASIC3.83□□□□□ -1.8
O00370 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.83□□□□□ -1.8
O00370 AC093424.1-201ENST00000604999 338 ntBASIC3.83□□□□□ -1.8
O00370 AC245389.1-201ENST00000605141 529 ntBASIC3.83□□□□□ -1.8
O00370 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC3.83□□□□□ -1.8
O00370 AC069209.1-201ENST00000619282 651 ntBASIC3.83□□□□□ -1.8
O00370 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.83□□□□□ -1.8
O00370 AC112200.1-201ENST00000625015 234 ntBASIC3.83□□□□□ -1.8
O00370 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC3.83□□□□□ -1.8
O00370 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
O00370 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
O00370 AL133383.2-201ENST00000622958 2336 ntBASIC3.83□□□□□ -1.8
O00370 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.83□□□□□ -1.8
O00370 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.83□□□□□ -1.8
O00370 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
O00370 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
O00370 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.82□□□□□ -1.8
O00370 ZNF876P-202ENST00000398732 1485 ntBASIC3.82□□□□□ -1.8
O00370 AC109315.1-201ENST00000584143 1347 ntBASIC3.82□□□□□ -1.8
O00370 RNU6-492P-201ENST00000363035 104 ntBASIC3.82□□□□□ -1.8
O00370 RNU5D-1-201ENST00000363299 116 ntBASIC3.82□□□□□ -1.8
O00370 RNU6-335P-201ENST00000364563 113 ntBASIC3.82□□□□□ -1.8
O00370 SNORA51.2-201ENST00000364595 132 ntBASIC3.82□□□□□ -1.8
O00370 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC3.82□□□□□ -1.8
O00370 TAF9BP1-201ENST00000396646 746 ntBASIC3.82□□□□□ -1.8
O00370 AC009237.2-201ENST00000421358 284 ntBASIC3.82□□□□□ -1.8
O00370 AL389915.1-201ENST00000422463 466 ntBASIC3.82□□□□□ -1.8
O00370 RPL31P12-201ENST00000422587 358 ntBASIC3.82□□□□□ -1.8
O00370 ZDHHC20P2-201ENST00000424108 429 ntBASIC3.82□□□□□ -1.8
O00370 USP9YP22-201ENST00000438971 294 ntBASIC3.82□□□□□ -1.8
O00370 FGF7P5-201ENST00000441829 291 ntBASIC3.82□□□□□ -1.8
O00370 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.82□□□□□ -1.8
O00370 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.82□□□□□ -1.8
O00370 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.82□□□□□ -1.8
O00370 NECAP1P2-201ENST00000455668 727 ntBASIC3.82□□□□□ -1.8
O00370 SNORD11.1-201ENST00000459482 85 ntBASIC3.82□□□□□ -1.8
O00370 AC011979.1-201ENST00000472300 483 ntBASIC3.82□□□□□ -1.8
O00370 AC084357.1-201ENST00000473404 255 ntBASIC3.82□□□□□ -1.8
O00370 AP000893.1-201ENST00000474462 794 ntBASIC3.82□□□□□ -1.8
O00370 RPS3AP50-201ENST00000487064 803 ntBASIC3.82□□□□□ -1.8
O00370 OR4G11P-201ENST00000492842 939 ntBASIC3.82□□□□□ -1.8
O00370 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC3.82□□□□□ -1.8
O00370 RNF138P1-201ENST00000502765 546 ntBASIC3.82□□□□□ -1.8
O00370 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.82□□□□□ -1.8
O00370 AC008837.2-201ENST00000513076 418 ntBASIC3.82□□□□□ -1.8
O00370 RN7SKP244-201ENST00000516513 307 ntBASIC3.82□□□□□ -1.8
O00370 RN7SKP287-201ENST00000516546 266 ntBASIC3.82□□□□□ -1.8
O00370 RNU6-579P-201ENST00000516879 102 ntBASIC3.82□□□□□ -1.8
O00370 IGKV2D-36-201ENST00000518643 226 ntBASIC3.82□□□□□ -1.8
O00370 AC087808.1-201ENST00000520501 361 ntBASIC3.82□□□□□ -1.8
O00370 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC3.82□□□□□ -1.8
O00370 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC3.82□□□□□ -1.8
O00370 AC138915.2-201ENST00000569776 97 ntBASIC3.82□□□□□ -1.8
O00370 AC020914.6-201ENST00000594327 272 ntBASIC3.82□□□□□ -1.8
O00370 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC3.82□□□□□ -1.8
O00370 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC3.82□□□□□ -1.8
O00370 AC006077.1-201ENST00000604746 343 ntBASIC3.82□□□□□ -1.8
O00370 AC069545.1-201ENST00000605671 358 ntBASIC3.82□□□□□ -1.8
O00370 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC3.82□□□□□ -1.8
O00370 AC079395.3-201ENST00000615161 484 ntBASIC3.82□□□□□ -1.8
O00370 AC011330.2-201ENST00000621680 635 ntBASIC3.82□□□□□ -1.8
O00370 CR392039.5-201ENST00000623201 510 ntBASIC3.82□□□□□ -1.8
O00370 AC034229.5-201ENST00000624258 185 ntBASIC3.82□□□□□ -1.8
O00370 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.82□□□□□ -1.8
O00370 MIR7153-201ENST00000637758 57 ntBASIC3.82□□□□□ -1.8
O00370 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
O00370 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
O00370 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
O00370 SNORA73.2-201ENST00000364946 201 ntBASIC3.81□□□□□ -1.8
O00370 Y_RNA.465-201ENST00000384293 102 ntBASIC3.81□□□□□ -1.8
O00370 TANK-206ENST00000406287 875 ntTSL 5 BASIC3.81□□□□□ -1.8
O00370 AC017079.2-201ENST00000416102 485 ntBASIC3.81□□□□□ -1.8
O00370 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.81□□□□□ -1.8
O00370 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms