Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 SNORA7.2-201ENST00000364446 145 ntBASIC2.8□□□□□ -1.96
UPK1AO00322 SNORA51.2-201ENST00000364595 132 ntBASIC2.8□□□□□ -1.96
UPK1AO00322 MIR887-201ENST00000401258 79 ntBASIC2.8□□□□□ -1.96
UPK1AO00322 RNU6-272P-201ENST00000411028 104 ntBASIC2.8□□□□□ -1.96
UPK1AO00322 AC244098.2-201ENST00000422068 99 ntBASIC2.8□□□□□ -1.96
UPK1AO00322 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC2.8□□□□□ -1.96
UPK1AO00322 RPL36AP33-201ENST00000450395 310 ntBASIC2.8□□□□□ -1.96
UPK1AO00322 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC2.8□□□□□ -1.96
UPK1AO00322 GSTA11P-201ENST00000452866 669 ntBASIC2.8□□□□□ -1.96
UPK1AO00322 AC089999.1-201ENST00000460336 374 ntBASIC2.8□□□□□ -1.96
UPK1AO00322 AC117440.1-201ENST00000474107 571 ntBASIC2.8□□□□□ -1.96
UPK1AO00322 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC2.8□□□□□ -1.96
UPK1AO00322 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC2.8□□□□□ -1.96
UPK1AO00322 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC2.8□□□□□ -1.96
UPK1AO00322 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC2.8□□□□□ -1.96
UPK1AO00322 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC2.8□□□□□ -1.96
UPK1AO00322 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC2.8□□□□□ -1.96
UPK1AO00322 CFL2-206ENST00000556161 546 ntTSL 4 BASIC2.8□□□□□ -1.96
UPK1AO00322 AC034105.3-201ENST00000565294 442 ntBASIC2.8□□□□□ -1.96
UPK1AO00322 MTCYBP28-201ENST00000566728 1132 ntBASIC2.8□□□□□ -1.96
UPK1AO00322 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC2.8□□□□□ -1.96
UPK1AO00322 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.8□□□□□ -1.96
UPK1AO00322 AC034268.2-201ENST00000571784 482 ntBASIC2.8□□□□□ -1.96
UPK1AO00322 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
UPK1AO00322 AC017100.2-201ENST00000584628 355 ntBASIC2.8□□□□□ -1.96
UPK1AO00322 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC2.8□□□□□ -1.96
UPK1AO00322 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC2.8□□□□□ -1.96
UPK1AO00322 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC2.8□□□□□ -1.96
UPK1AO00322 AC079880.2-201ENST00000603790 1213 ntBASIC2.8□□□□□ -1.96
UPK1AO00322 IGHV3-29-201ENST00000604817 344 ntBASIC2.8□□□□□ -1.96
UPK1AO00322 AL451074.6-201ENST00000608512 729 ntBASIC2.8□□□□□ -1.96
UPK1AO00322 AP001033.2-201ENST00000609701 1003 ntBASIC2.8□□□□□ -1.96
UPK1AO00322 AL020991.1-201ENST00000612314 373 ntBASIC2.8□□□□□ -1.96
UPK1AO00322 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC2.8□□□□□ -1.96
UPK1AO00322 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC2.8□□□□□ -1.96
UPK1AO00322 AC073348.1-201ENST00000623002 331 ntBASIC2.8□□□□□ -1.96
UPK1AO00322 AL109659.3-201ENST00000624985 950 ntBASIC2.8□□□□□ -1.96
UPK1AO00322 AC092608.3-201ENST00000625017 386 ntBASIC2.8□□□□□ -1.96
UPK1AO00322 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
UPK1AO00322 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
UPK1AO00322 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
UPK1AO00322 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
UPK1AO00322 AL031121.1-201ENST00000406553 254 ntBASIC2.79□□□□□ -1.96
UPK1AO00322 SNORA11C-201ENST00000408532 129 ntBASIC2.79□□□□□ -1.96
UPK1AO00322 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC2.79□□□□□ -1.96
UPK1AO00322 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC2.79□□□□□ -1.96
UPK1AO00322 SETP8-201ENST00000435341 628 ntBASIC2.79□□□□□ -1.96
UPK1AO00322 DNAJC19P8-201ENST00000452887 259 ntBASIC2.79□□□□□ -1.96
UPK1AO00322 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC2.79□□□□□ -1.96
UPK1AO00322 ARPC3P2-201ENST00000457786 533 ntBASIC2.79□□□□□ -1.96
UPK1AO00322 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC2.79□□□□□ -1.96
UPK1AO00322 PRELID3BP6-201ENST00000503839 571 ntBASIC2.79□□□□□ -1.96
UPK1AO00322 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC2.79□□□□□ -1.96
UPK1AO00322 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.79□□□□□ -1.96
UPK1AO00322 RN7SKP272-201ENST00000516988 232 ntBASIC2.79□□□□□ -1.96
UPK1AO00322 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC2.79□□□□□ -1.96
UPK1AO00322 PSMA2P1-201ENST00000526365 646 ntBASIC2.79□□□□□ -1.96
UPK1AO00322 RGS4-207ENST00000527809 817 ntTSL 4 BASIC2.79□□□□□ -1.96
UPK1AO00322 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.79□□□□□ -1.96
UPK1AO00322 MTCYBP41-201ENST00000528913 1123 ntBASIC2.79□□□□□ -1.96
UPK1AO00322 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC2.79□□□□□ -1.96
UPK1AO00322 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC2.79□□□□□ -1.96
UPK1AO00322 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
UPK1AO00322 AC010735.1-201ENST00000567305 1026 ntBASIC2.79□□□□□ -1.96
UPK1AO00322 ATP5F1P7-201ENST00000567330 760 ntBASIC2.79□□□□□ -1.96
UPK1AO00322 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC2.79□□□□□ -1.96
UPK1AO00322 AC008687.2-201ENST00000597865 520 ntBASIC2.79□□□□□ -1.96
UPK1AO00322 AC012468.1-201ENST00000604888 430 ntBASIC2.79□□□□□ -1.96
UPK1AO00322 AC007179.3-201ENST00000604976 235 ntBASIC2.79□□□□□ -1.96
UPK1AO00322 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC2.79□□□□□ -1.96
UPK1AO00322 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC2.79□□□□□ -1.96
UPK1AO00322 AP003400.6-201ENST00000624698 740 ntBASIC2.79□□□□□ -1.96
UPK1AO00322 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC2.79□□□□□ -1.96
UPK1AO00322 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC2.78□□□□□ -1.96
UPK1AO00322 SNORA71.1-201ENST00000364523 117 ntBASIC2.78□□□□□ -1.96
UPK1AO00322 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
UPK1AO00322 AL121972.1-201ENST00000402023 252 ntBASIC2.78□□□□□ -1.96
UPK1AO00322 SNORD88.1-201ENST00000408684 91 ntBASIC2.78□□□□□ -1.96
UPK1AO00322 RNA5SP129-201ENST00000410276 118 ntBASIC2.78□□□□□ -1.96
UPK1AO00322 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC2.78□□□□□ -1.96
UPK1AO00322 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC2.78□□□□□ -1.96
UPK1AO00322 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
UPK1AO00322 AC093422.3-201ENST00000428506 305 ntBASIC2.78□□□□□ -1.96
UPK1AO00322 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC2.78□□□□□ -1.96
UPK1AO00322 AL512649.1-201ENST00000428997 581 ntBASIC2.78□□□□□ -1.96
UPK1AO00322 RPL36P19-201ENST00000430744 301 ntBASIC2.78□□□□□ -1.96
UPK1AO00322 ZFAND6P1-201ENST00000434138 605 ntBASIC2.78□□□□□ -1.96
UPK1AO00322 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC2.78□□□□□ -1.96
UPK1AO00322 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC2.78□□□□□ -1.96
UPK1AO00322 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC2.78□□□□□ -1.96
UPK1AO00322 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC2.78□□□□□ -1.96
UPK1AO00322 NFU1-207ENST00000462320 558 ntTSL 4 BASIC2.78□□□□□ -1.96
UPK1AO00322 AC087879.1-201ENST00000474343 374 ntBASIC2.78□□□□□ -1.96
UPK1AO00322 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC2.78□□□□□ -1.96
UPK1AO00322 RN7SL499P-201ENST00000481141 276 ntBASIC2.78□□□□□ -1.96
UPK1AO00322 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC2.78□□□□□ -1.96
UPK1AO00322 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC2.78□□□□□ -1.96
UPK1AO00322 AF279873.1-201ENST00000523393 313 ntBASIC2.78□□□□□ -1.96
UPK1AO00322 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC2.78□□□□□ -1.96
UPK1AO00322 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC2.78□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 130.5 ms