Protein–RNA interactions for Protein: O00257

CBX4, E3 SUMO-protein ligase CBX4, humanhuman

Predictions only

Length 560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4O00257 AL161713.1-201ENST00000555538 145 ntBASIC4.93□□□□□ -1.62
CBX4O00257 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC4.93□□□□□ -1.62
CBX4O00257 AC022726.1-201ENST00000587475 207 ntBASIC4.93□□□□□ -1.62
CBX4O00257 UBE2L4-201ENST00000587688 464 ntBASIC4.93□□□□□ -1.62
CBX4O00257 AL158801.5-201ENST00000623123 465 ntBASIC4.93□□□□□ -1.62
CBX4O00257 CR381572.1-201ENST00000625098 102 ntBASIC4.93□□□□□ -1.62
CBX4O00257 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
CBX4O00257 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC4.93□□□□□ -1.62
CBX4O00257 EIF2AP4-201ENST00000424793 1781 ntBASIC4.93□□□□□ -1.62
CBX4O00257 ACTR3BP5-201ENST00000448440 1479 ntBASIC4.93□□□□□ -1.62
CBX4O00257 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CBX4O00257 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
CBX4O00257 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC4.93□□□□□ -1.62
CBX4O00257 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
CBX4O00257 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CBX4O00257 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
CBX4O00257 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
CBX4O00257 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC4.92□□□□□ -1.62
CBX4O00257 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC4.92□□□□□ -1.62
CBX4O00257 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
CBX4O00257 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.92□□□□□ -1.62
CBX4O00257 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CBX4O00257 AC100778.3-201ENST00000580060 1750 ntBASIC4.92□□□□□ -1.62
CBX4O00257 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CBX4O00257 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
CBX4O00257 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.92□□□□□ -1.62
CBX4O00257 Y_RNA.409-201ENST00000383990 98 ntBASIC4.92□□□□□ -1.62
CBX4O00257 RNU6-761P-201ENST00000384148 107 ntBASIC4.92□□□□□ -1.62
CBX4O00257 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
CBX4O00257 RPS15AP12-201ENST00000419498 388 ntBASIC4.92□□□□□ -1.62
CBX4O00257 ELOCP4-201ENST00000420090 333 ntBASIC4.92□□□□□ -1.62
CBX4O00257 NRBF2P3-201ENST00000432731 865 ntBASIC4.92□□□□□ -1.62
CBX4O00257 AL513533.1-201ENST00000453728 415 ntBASIC4.92□□□□□ -1.62
CBX4O00257 MTCO2P29-201ENST00000465212 189 ntBASIC4.92□□□□□ -1.62
CBX4O00257 ST13P14-201ENST00000474095 734 ntBASIC4.92□□□□□ -1.62
CBX4O00257 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC4.92□□□□□ -1.62
CBX4O00257 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC4.92□□□□□ -1.62
CBX4O00257 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC4.92□□□□□ -1.62
CBX4O00257 RN7SKP276-201ENST00000516242 268 ntBASIC4.92□□□□□ -1.62
CBX4O00257 RNU6-709P-201ENST00000517257 104 ntBASIC4.92□□□□□ -1.62
CBX4O00257 MAL2-201ENST00000522112 573 ntTSL 4 BASIC4.92□□□□□ -1.62
CBX4O00257 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC4.92□□□□□ -1.62
CBX4O00257 SUB1P2-201ENST00000556401 297 ntBASIC4.92□□□□□ -1.62
CBX4O00257 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC4.92□□□□□ -1.62
CBX4O00257 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC4.92□□□□□ -1.62
CBX4O00257 MIR3146-201ENST00000580367 79 ntBASIC4.92□□□□□ -1.62
CBX4O00257 AL391358.1-201ENST00000605342 190 ntBASIC4.92□□□□□ -1.62
CBX4O00257 AC012150.2-201ENST00000621300 544 ntBASIC4.92□□□□□ -1.62
CBX4O00257 AC139792.3-201ENST00000623525 224 ntBASIC4.92□□□□□ -1.62
CBX4O00257 AC040168.1-201ENST00000623594 991 ntBASIC4.92□□□□□ -1.62
CBX4O00257 AC099654.14-201ENST00000638599 341 ntBASIC4.92□□□□□ -1.62
CBX4O00257 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
CBX4O00257 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC4.92□□□□□ -1.62
CBX4O00257 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CBX4O00257 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.92□□□□□ -1.62
CBX4O00257 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC4.92□□□□□ -1.62
CBX4O00257 TLK1P1-201ENST00000456760 2440 ntBASIC4.92□□□□□ -1.62
CBX4O00257 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CBX4O00257 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
CBX4O00257 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CBX4O00257 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CBX4O00257 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.91□□□□□ -1.62
CBX4O00257 AC093535.2-201ENST00000624769 2326 ntBASIC4.91□□□□□ -1.62
CBX4O00257 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
CBX4O00257 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
CBX4O00257 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.91□□□□□ -1.62
CBX4O00257 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
CBX4O00257 A2MP1-204ENST00000566278 4130 ntBASIC4.91□□□□□ -1.62
CBX4O00257 RNY4P16-201ENST00000364768 94 ntBASIC4.91□□□□□ -1.62
CBX4O00257 RNU6-282P-201ENST00000365357 103 ntBASIC4.91□□□□□ -1.62
CBX4O00257 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CBX4O00257 Y_RNA.481-201ENST00000384373 102 ntBASIC4.91□□□□□ -1.62
CBX4O00257 SNORA70E-201ENST00000384492 135 ntBASIC4.91□□□□□ -1.62
CBX4O00257 RNU6-780P-201ENST00000391030 104 ntBASIC4.91□□□□□ -1.62
CBX4O00257 AL356967.1-201ENST00000406305 431 ntBASIC4.91□□□□□ -1.62
CBX4O00257 USP9YP6-201ENST00000413550 854 ntBASIC4.91□□□□□ -1.62
CBX4O00257 USP9YP27-201ENST00000418455 438 ntBASIC4.91□□□□□ -1.62
CBX4O00257 RPL30P16-201ENST00000419341 429 ntBASIC4.91□□□□□ -1.62
CBX4O00257 MTCO2P19-201ENST00000427513 598 ntBASIC4.91□□□□□ -1.62
CBX4O00257 AC137499.1-201ENST00000427602 88 ntBASIC4.91□□□□□ -1.62
CBX4O00257 AL451139.1-201ENST00000434718 346 ntBASIC4.91□□□□□ -1.62
CBX4O00257 MTCO3P18-201ENST00000440206 761 ntBASIC4.91□□□□□ -1.62
CBX4O00257 AL662791.1-201ENST00000441992 928 ntBASIC4.91□□□□□ -1.62
CBX4O00257 RPL23AP20-201ENST00000447965 421 ntBASIC4.91□□□□□ -1.62
CBX4O00257 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC4.91□□□□□ -1.62
CBX4O00257 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC4.91□□□□□ -1.62
CBX4O00257 MTND1P9-201ENST00000453775 944 ntBASIC4.91□□□□□ -1.62
CBX4O00257 RPS5P7-201ENST00000456664 608 ntBASIC4.91□□□□□ -1.62
CBX4O00257 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC4.91□□□□□ -1.62
CBX4O00257 SNORD121B-201ENST00000458838 81 ntBASIC4.91□□□□□ -1.62
CBX4O00257 AC053481.1-201ENST00000467217 306 ntBASIC4.91□□□□□ -1.62
CBX4O00257 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC4.91□□□□□ -1.62
CBX4O00257 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC4.91□□□□□ -1.62
CBX4O00257 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC4.91□□□□□ -1.62
CBX4O00257 NRON-201ENST00000517270 370 ntBASIC4.91□□□□□ -1.62
CBX4O00257 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CBX4O00257 AP003385.6-201ENST00000531603 374 ntBASIC4.91□□□□□ -1.62
CBX4O00257 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC4.91□□□□□ -1.62
CBX4O00257 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC4.91□□□□□ -1.62
CBX4O00257 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4.91□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 152.8 ms