Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 AC084024.2-201ENST00000503480 791 ntBASIC3.41□□□□□ -1.86
PDLIM1O00151 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC3.41□□□□□ -1.86
PDLIM1O00151 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.41□□□□□ -1.86
PDLIM1O00151 SCARNA14-201ENST00000516903 136 ntBASIC3.41□□□□□ -1.86
PDLIM1O00151 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC3.41□□□□□ -1.86
PDLIM1O00151 AP001317.1-201ENST00000531194 960 ntBASIC3.41□□□□□ -1.86
PDLIM1O00151 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC3.41□□□□□ -1.86
PDLIM1O00151 AL157394.1-201ENST00000562983 1224 ntBASIC3.41□□□□□ -1.86
PDLIM1O00151 SNRPGP15-201ENST00000600149 222 ntBASIC3.41□□□□□ -1.86
PDLIM1O00151 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC3.41□□□□□ -1.86
PDLIM1O00151 AC024060.1-201ENST00000607052 494 ntBASIC3.41□□□□□ -1.86
PDLIM1O00151 AC090912.3-201ENST00000609775 533 ntBASIC3.41□□□□□ -1.86
PDLIM1O00151 AC006023.2-201ENST00000609916 167 ntBASIC3.41□□□□□ -1.86
PDLIM1O00151 AC131902.3-201ENST00000611767 581 ntBASIC3.41□□□□□ -1.86
PDLIM1O00151 AC104763.3-201ENST00000613765 618 ntBASIC3.41□□□□□ -1.86
PDLIM1O00151 AC123767.1-202ENST00000620407 817 ntBASIC3.41□□□□□ -1.86
PDLIM1O00151 AL590240.3-201ENST00000621416 943 ntBASIC3.41□□□□□ -1.86
PDLIM1O00151 AL157770.1-201ENST00000623049 439 ntBASIC3.41□□□□□ -1.86
PDLIM1O00151 AC084035.1-201ENST00000634543 607 ntBASIC3.41□□□□□ -1.86
PDLIM1O00151 AC007823.1-201ENST00000569932 1566 ntBASIC3.41□□□□□ -1.86
PDLIM1O00151 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
PDLIM1O00151 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
PDLIM1O00151 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.4□□□□□ -1.86
PDLIM1O00151 RNU6-707P-201ENST00000364647 95 ntBASIC3.4□□□□□ -1.87
PDLIM1O00151 RNU1-64P-201ENST00000365443 163 ntBASIC3.4□□□□□ -1.87
PDLIM1O00151 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.4□□□□□ -1.87
PDLIM1O00151 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
PDLIM1O00151 SNORA26.7-201ENST00000391288 122 ntBASIC3.4□□□□□ -1.87
PDLIM1O00151 RPL21P3-201ENST00000395517 478 ntBASIC3.4□□□□□ -1.87
PDLIM1O00151 RPL32P23-201ENST00000397237 405 ntBASIC3.4□□□□□ -1.87
PDLIM1O00151 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
PDLIM1O00151 TANK-206ENST00000406287 875 ntTSL 5 BASIC3.4□□□□□ -1.87
PDLIM1O00151 SNORA3.3-201ENST00000408712 125 ntBASIC3.4□□□□□ -1.87
PDLIM1O00151 VN1R51P-201ENST00000411675 945 ntBASIC3.4□□□□□ -1.87
PDLIM1O00151 KCTD10P1-201ENST00000434203 625 ntBASIC3.4□□□□□ -1.87
PDLIM1O00151 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
PDLIM1O00151 AC093155.1-201ENST00000440164 826 ntBASIC3.4□□□□□ -1.87
PDLIM1O00151 HMGB3P6-201ENST00000444896 598 ntBASIC3.4□□□□□ -1.87
PDLIM1O00151 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.4□□□□□ -1.87
PDLIM1O00151 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.4□□□□□ -1.87
PDLIM1O00151 AC104164.3-201ENST00000467363 1258 ntBASIC3.4□□□□□ -1.87
PDLIM1O00151 RN7SL132P-201ENST00000478131 296 ntBASIC3.4□□□□□ -1.87
PDLIM1O00151 AC012181.1-201ENST00000479895 423 ntBASIC3.4□□□□□ -1.87
PDLIM1O00151 RPS4XP13-201ENST00000483219 789 ntBASIC3.4□□□□□ -1.87
PDLIM1O00151 AC093278.1-201ENST00000494700 600 ntBASIC3.4□□□□□ -1.87
PDLIM1O00151 RN7SL323P-201ENST00000494712 295 ntBASIC3.4□□□□□ -1.87
PDLIM1O00151 AL139099.1-201ENST00000497398 403 ntBASIC3.4□□□□□ -1.87
PDLIM1O00151 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC3.4□□□□□ -1.87
PDLIM1O00151 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC3.4□□□□□ -1.87
PDLIM1O00151 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
PDLIM1O00151 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC3.4□□□□□ -1.87
PDLIM1O00151 AP006245.1-201ENST00000522549 120 ntBASIC3.4□□□□□ -1.87
PDLIM1O00151 ARL2BPP5-201ENST00000523141 481 ntBASIC3.4□□□□□ -1.87
PDLIM1O00151 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC3.4□□□□□ -1.87
PDLIM1O00151 OR4A45P-201ENST00000529954 901 ntBASIC3.4□□□□□ -1.87
PDLIM1O00151 AL121766.1-201ENST00000547436 487 ntBASIC3.4□□□□□ -1.87
PDLIM1O00151 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC3.4□□□□□ -1.87
PDLIM1O00151 AC023161.2-201ENST00000551218 780 ntBASIC3.4□□□□□ -1.87
PDLIM1O00151 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.4□□□□□ -1.87
PDLIM1O00151 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.4□□□□□ -1.87
PDLIM1O00151 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.4□□□□□ -1.87
PDLIM1O00151 MTCYBP23-201ENST00000558717 1102 ntBASIC3.4□□□□□ -1.87
PDLIM1O00151 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC3.4□□□□□ -1.87
PDLIM1O00151 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC3.4□□□□□ -1.87
PDLIM1O00151 AC010653.1-201ENST00000571108 881 ntBASIC3.4□□□□□ -1.87
PDLIM1O00151 MIR4509-3-201ENST00000578671 94 ntBASIC3.4□□□□□ -1.87
PDLIM1O00151 MIR5685-201ENST00000579080 79 ntBASIC3.4□□□□□ -1.87
PDLIM1O00151 MIR4509-2-201ENST00000583920 94 ntBASIC3.4□□□□□ -1.87
PDLIM1O00151 BNIP3P38-201ENST00000601117 544 ntBASIC3.4□□□□□ -1.87
PDLIM1O00151 AL109618.2-201ENST00000605527 211 ntBASIC3.4□□□□□ -1.87
PDLIM1O00151 MIR4509-1-201ENST00000618224 94 ntBASIC3.4□□□□□ -1.87
PDLIM1O00151 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.4□□□□□ -1.87
PDLIM1O00151 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.4□□□□□ -1.87
PDLIM1O00151 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
PDLIM1O00151 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.4□□□□□ -1.87
PDLIM1O00151 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.87
PDLIM1O00151 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.4□□□□□ -1.87
PDLIM1O00151 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.87
PDLIM1O00151 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.39□□□□□ -1.87
PDLIM1O00151 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
PDLIM1O00151 AC068647.1-201ENST00000489539 2265 ntBASIC3.39□□□□□ -1.87
PDLIM1O00151 RNVU1-3-201ENST00000364313 161 ntBASIC3.39□□□□□ -1.87
PDLIM1O00151 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC3.39□□□□□ -1.87
PDLIM1O00151 SNORD116-12-201ENST00000384468 92 ntBASIC3.39□□□□□ -1.87
PDLIM1O00151 MT-TC-201ENST00000387405 66 ntBASIC3.39□□□□□ -1.87
PDLIM1O00151 AL023807.1-201ENST00000407932 359 ntBASIC3.39□□□□□ -1.87
PDLIM1O00151 OR4K6P-201ENST00000416478 897 ntBASIC3.39□□□□□ -1.87
PDLIM1O00151 RPL36AP36-201ENST00000418616 301 ntBASIC3.39□□□□□ -1.87
PDLIM1O00151 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC3.39□□□□□ -1.87
PDLIM1O00151 MTCO3P1-205ENST00000422088 832 ntBASIC3.39□□□□□ -1.87
PDLIM1O00151 RPF2P1-201ENST00000424137 906 ntBASIC3.39□□□□□ -1.87
PDLIM1O00151 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC3.39□□□□□ -1.87
PDLIM1O00151 BLOC1S2P1-201ENST00000428431 301 ntBASIC3.39□□□□□ -1.87
PDLIM1O00151 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC3.39□□□□□ -1.87
PDLIM1O00151 HMGN2P20-201ENST00000437531 273 ntBASIC3.39□□□□□ -1.87
PDLIM1O00151 AC241584.1-201ENST00000438469 1241 ntBASIC3.39□□□□□ -1.87
PDLIM1O00151 HMGB1P12-201ENST00000438594 598 ntBASIC3.39□□□□□ -1.87
PDLIM1O00151 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC3.39□□□□□ -1.87
PDLIM1O00151 RRM2P4-201ENST00000441721 562 ntBASIC3.39□□□□□ -1.87
PDLIM1O00151 AL358794.1-201ENST00000445689 381 ntBASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms