Protein–RNA interactions for Protein: A6NIU2

LINC01549, Putative uncharacterized protein encoded by LINC01549, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01549A6NIU2 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC1.68□□□□□ -2.14
LINC01549A6NIU2 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC1.68□□□□□ -2.14
LINC01549A6NIU2 AC013562.2-201ENST00000611632 603 ntBASIC1.68□□□□□ -2.14
LINC01549A6NIU2 AC092159.4-201ENST00000624944 550 ntBASIC1.68□□□□□ -2.14
LINC01549A6NIU2 MIR1291-201ENST00000627649 87 ntBASIC1.68□□□□□ -2.14
LINC01549A6NIU2 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC1.68□□□□□ -2.14
LINC01549A6NIU2 RNU6-859P-201ENST00000362728 107 ntBASIC1.67□□□□□ -2.14
LINC01549A6NIU2 MIR183-201ENST00000384958 110 ntBASIC1.67□□□□□ -2.14
LINC01549A6NIU2 MIR449B-201ENST00000384995 97 ntBASIC1.67□□□□□ -2.14
LINC01549A6NIU2 Z75741.2-201ENST00000417272 1167 ntBASIC1.67□□□□□ -2.14
LINC01549A6NIU2 SRIP2-201ENST00000428470 166 ntBASIC1.67□□□□□ -2.14
LINC01549A6NIU2 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC1.67□□□□□ -2.14
LINC01549A6NIU2 AC011753.1-201ENST00000451001 220 ntBASIC1.67□□□□□ -2.14
LINC01549A6NIU2 RPL36AP51-201ENST00000487216 318 ntBASIC1.67□□□□□ -2.14
LINC01549A6NIU2 RN7SL504P-201ENST00000494496 287 ntBASIC1.67□□□□□ -2.14
LINC01549A6NIU2 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC1.67□□□□□ -2.14
LINC01549A6NIU2 AC006445.2-201ENST00000510061 472 ntBASIC1.67□□□□□ -2.14
LINC01549A6NIU2 CDC42P4-201ENST00000510507 563 ntBASIC1.67□□□□□ -2.14
LINC01549A6NIU2 RNU1-45P-201ENST00000517191 141 ntBASIC1.67□□□□□ -2.14
LINC01549A6NIU2 AC087808.1-201ENST00000520501 361 ntBASIC1.67□□□□□ -2.14
LINC01549A6NIU2 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC1.67□□□□□ -2.14
LINC01549A6NIU2 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
LINC01549A6NIU2 AL121594.4-201ENST00000556211 1196 ntBASIC1.67□□□□□ -2.14
LINC01549A6NIU2 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC1.67□□□□□ -2.14
LINC01549A6NIU2 AL161756.2-201ENST00000604597 246 ntBASIC1.67□□□□□ -2.14
LINC01549A6NIU2 AC112503.2-201ENST00000609005 552 ntBASIC1.67□□□□□ -2.14
LINC01549A6NIU2 AC006023.2-201ENST00000609916 167 ntBASIC1.67□□□□□ -2.14
LINC01549A6NIU2 U6.105-201ENST00000637379 88 ntBASIC1.67□□□□□ -2.14
LINC01549A6NIU2 MTCO1P6-201ENST00000481192 1384 ntBASIC1.67□□□□□ -2.14
LINC01549A6NIU2 THUMPD3P1-201ENST00000506556 1480 ntBASIC1.67□□□□□ -2.14
LINC01549A6NIU2 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC1.67□□□□□ -2.14
LINC01549A6NIU2 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC1.67□□□□□ -2.14
LINC01549A6NIU2 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC1.66□□□□□ -2.14
LINC01549A6NIU2 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC1.66□□□□□ -2.14
LINC01549A6NIU2 AC073055.1-201ENST00000456901 1621 ntBASIC1.66□□□□□ -2.14
LINC01549A6NIU2 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC1.66□□□□□ -2.14
LINC01549A6NIU2 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
LINC01549A6NIU2 RNU6-1180P-201ENST00000364935 107 ntBASIC1.66□□□□□ -2.14
LINC01549A6NIU2 MIR141-201ENST00000384975 95 ntBASIC1.66□□□□□ -2.14
LINC01549A6NIU2 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
LINC01549A6NIU2 MIR937-201ENST00000401271 86 ntBASIC1.66□□□□□ -2.14
LINC01549A6NIU2 AL359511.1-201ENST00000402970 211 ntBASIC1.66□□□□□ -2.14
LINC01549A6NIU2 AC073264.1-201ENST00000411508 416 ntBASIC1.66□□□□□ -2.14
LINC01549A6NIU2 HMGB3P2-201ENST00000411913 584 ntBASIC1.66□□□□□ -2.14
LINC01549A6NIU2 AC092447.6-201ENST00000414578 210 ntBASIC1.66□□□□□ -2.14
LINC01549A6NIU2 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC1.66□□□□□ -2.14
LINC01549A6NIU2 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC1.66□□□□□ -2.14
LINC01549A6NIU2 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC1.66□□□□□ -2.14
LINC01549A6NIU2 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC1.66□□□□□ -2.14
LINC01549A6NIU2 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC1.66□□□□□ -2.14
LINC01549A6NIU2 RNU6-1218P-201ENST00000458990 108 ntBASIC1.66□□□□□ -2.14
LINC01549A6NIU2 AC025033.1-201ENST00000463883 194 ntBASIC1.66□□□□□ -2.14
LINC01549A6NIU2 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
LINC01549A6NIU2 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC1.66□□□□□ -2.14
LINC01549A6NIU2 AC079804.2-201ENST00000490376 200 ntBASIC1.66□□□□□ -2.14
LINC01549A6NIU2 AL133372.1-201ENST00000493565 745 ntBASIC1.66□□□□□ -2.14
LINC01549A6NIU2 MTCO2P9-201ENST00000503214 694 ntBASIC1.66□□□□□ -2.14
LINC01549A6NIU2 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC1.66□□□□□ -2.14
LINC01549A6NIU2 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC1.66□□□□□ -2.14
LINC01549A6NIU2 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC1.66□□□□□ -2.14
LINC01549A6NIU2 AL391156.1-201ENST00000554965 554 ntBASIC1.66□□□□□ -2.14
LINC01549A6NIU2 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC1.66□□□□□ -2.14
LINC01549A6NIU2 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC1.66□□□□□ -2.14
LINC01549A6NIU2 SNORD53-201ENST00000579969 78 ntBASIC1.66□□□□□ -2.14
LINC01549A6NIU2 VN1R78P-201ENST00000597393 564 ntBASIC1.66□□□□□ -2.14
LINC01549A6NIU2 AC093732.2-201ENST00000607950 274 ntBASIC1.66□□□□□ -2.14
LINC01549A6NIU2 AC105429.2-201ENST00000610567 517 ntBASIC1.66□□□□□ -2.14
LINC01549A6NIU2 MIR6840-201ENST00000611937 71 ntBASIC1.66□□□□□ -2.14
LINC01549A6NIU2 VN1R74P-201ENST00000613259 503 ntBASIC1.66□□□□□ -2.14
LINC01549A6NIU2 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC1.66□□□□□ -2.14
LINC01549A6NIU2 DUXAP9-208ENST00000622815 614 ntBASIC1.66□□□□□ -2.14
LINC01549A6NIU2 AC034229.5-201ENST00000624258 185 ntBASIC1.66□□□□□ -2.14
LINC01549A6NIU2 AC092608.2-201ENST00000624427 218 ntBASIC1.66□□□□□ -2.14
LINC01549A6NIU2 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
LINC01549A6NIU2 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.66□□□□□ -2.14
LINC01549A6NIU2 AL359693.1-201ENST00000614959 2407 ntBASIC1.66□□□□□ -2.14
LINC01549A6NIU2 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
LINC01549A6NIU2 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC1.65□□□□□ -2.14
LINC01549A6NIU2 ZNF658B-202ENST00000615961 3375 ntBASIC1.65□□□□□ -2.15
LINC01549A6NIU2 RNU1-112P-201ENST00000364401 164 ntBASIC1.65□□□□□ -2.15
LINC01549A6NIU2 RNU6-304P-201ENST00000364855 107 ntBASIC1.65□□□□□ -2.15
LINC01549A6NIU2 CD24P4-201ENST00000382840 243 ntBASIC1.65□□□□□ -2.15
LINC01549A6NIU2 UBA52P6-201ENST00000399822 382 ntBASIC1.65□□□□□ -2.15
LINC01549A6NIU2 ERMN-204ENST00000409925 556 ntTSL 4 BASIC1.65□□□□□ -2.15
LINC01549A6NIU2 COTL1P1-201ENST00000422309 375 ntBASIC1.65□□□□□ -2.15
LINC01549A6NIU2 AJ239321.1-201ENST00000424255 564 ntBASIC1.65□□□□□ -2.15
LINC01549A6NIU2 TRGV7-201ENST00000427089 353 ntBASIC1.65□□□□□ -2.15
LINC01549A6NIU2 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
LINC01549A6NIU2 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC1.65□□□□□ -2.15
LINC01549A6NIU2 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC1.65□□□□□ -2.15
LINC01549A6NIU2 PRDX3P3-201ENST00000447765 522 ntBASIC1.65□□□□□ -2.15
LINC01549A6NIU2 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC1.65□□□□□ -2.15
LINC01549A6NIU2 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC1.65□□□□□ -2.15
LINC01549A6NIU2 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC1.65□□□□□ -2.15
LINC01549A6NIU2 LINC00888-204ENST00000487386 421 ntBASIC1.65□□□□□ -2.15
LINC01549A6NIU2 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC1.65□□□□□ -2.15
LINC01549A6NIU2 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
LINC01549A6NIU2 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC1.65□□□□□ -2.15
LINC01549A6NIU2 SETP12-201ENST00000514068 805 ntBASIC1.65□□□□□ -2.15
LINC01549A6NIU2 AP003102.1-201ENST00000525638 661 ntBASIC1.65□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 133.2 ms