Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC3.33□□□□□ -1.88
SMIM28A0A1B0GU29 SERPINE4P-201ENST00000554978 281 ntBASIC3.33□□□□□ -1.88
SMIM28A0A1B0GU29 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC3.33□□□□□ -1.88
SMIM28A0A1B0GU29 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC3.33□□□□□ -1.88
SMIM28A0A1B0GU29 AL451007.1-201ENST00000595491 289 ntBASIC3.33□□□□□ -1.88
SMIM28A0A1B0GU29 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.33□□□□□ -1.88
SMIM28A0A1B0GU29 VN1R92P-201ENST00000598511 928 ntBASIC3.33□□□□□ -1.88
SMIM28A0A1B0GU29 AC124016.2-201ENST00000610058 665 ntBASIC3.33□□□□□ -1.88
SMIM28A0A1B0GU29 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
SMIM28A0A1B0GU29 AL592295.2-201ENST00000612578 206 ntBASIC3.33□□□□□ -1.88
SMIM28A0A1B0GU29 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.33□□□□□ -1.88
SMIM28A0A1B0GU29 AC111188.2-201ENST00000529697 1387 ntBASIC3.33□□□□□ -1.88
SMIM28A0A1B0GU29 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
SMIM28A0A1B0GU29 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.33□□□□□ -1.88
SMIM28A0A1B0GU29 ZNF807-201ENST00000328088 1707 ntBASIC3.33□□□□□ -1.88
SMIM28A0A1B0GU29 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.32□□□□□ -1.88
SMIM28A0A1B0GU29 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
SMIM28A0A1B0GU29 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC3.32□□□□□ -1.88
SMIM28A0A1B0GU29 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
SMIM28A0A1B0GU29 OR5H2-201ENST00000355273 945 ntBASIC3.32□□□□□ -1.88
SMIM28A0A1B0GU29 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
SMIM28A0A1B0GU29 MIR22-201ENST00000362190 85 ntBASIC3.32□□□□□ -1.88
SMIM28A0A1B0GU29 SNORA71.1-201ENST00000364523 117 ntBASIC3.32□□□□□ -1.88
SMIM28A0A1B0GU29 SNORA70E-201ENST00000384492 135 ntBASIC3.32□□□□□ -1.88
SMIM28A0A1B0GU29 SNORA44-201ENST00000384584 132 ntBASIC3.32□□□□□ -1.88
SMIM28A0A1B0GU29 AL138878.1-201ENST00000405131 347 ntBASIC3.32□□□□□ -1.88
SMIM28A0A1B0GU29 RN7SKP285-201ENST00000410137 318 ntBASIC3.32□□□□□ -1.88
SMIM28A0A1B0GU29 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC3.32□□□□□ -1.88
SMIM28A0A1B0GU29 OR4K6P-201ENST00000416478 897 ntBASIC3.32□□□□□ -1.88
SMIM28A0A1B0GU29 RPS15AP40-201ENST00000419621 391 ntBASIC3.32□□□□□ -1.88
SMIM28A0A1B0GU29 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC3.32□□□□□ -1.88
SMIM28A0A1B0GU29 SFR1P2-201ENST00000421841 730 ntBASIC3.32□□□□□ -1.88
SMIM28A0A1B0GU29 RPL7P28-201ENST00000437739 740 ntBASIC3.32□□□□□ -1.88
SMIM28A0A1B0GU29 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC3.32□□□□□ -1.88
SMIM28A0A1B0GU29 AC002542.1-201ENST00000440683 193 ntBASIC3.32□□□□□ -1.88
SMIM28A0A1B0GU29 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC3.32□□□□□ -1.88
SMIM28A0A1B0GU29 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC3.32□□□□□ -1.88
SMIM28A0A1B0GU29 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.32□□□□□ -1.88
SMIM28A0A1B0GU29 NF1P3-201ENST00000457709 450 ntBASIC3.32□□□□□ -1.88
SMIM28A0A1B0GU29 AC004801.2-202ENST00000463559 283 ntBASIC3.32□□□□□ -1.88
SMIM28A0A1B0GU29 AC146507.1-201ENST00000468335 354 ntBASIC3.32□□□□□ -1.88
SMIM28A0A1B0GU29 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC3.32□□□□□ -1.88
SMIM28A0A1B0GU29 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC3.32□□□□□ -1.88
SMIM28A0A1B0GU29 AC108078.3-201ENST00000502633 489 ntBASIC3.32□□□□□ -1.88
SMIM28A0A1B0GU29 SUMO2P5-201ENST00000506790 245 ntBASIC3.32□□□□□ -1.88
SMIM28A0A1B0GU29 RNU1-143P-201ENST00000516296 146 ntBASIC3.32□□□□□ -1.88
SMIM28A0A1B0GU29 RN7SKP277-201ENST00000516895 283 ntBASIC3.32□□□□□ -1.88
SMIM28A0A1B0GU29 AP001207.2-201ENST00000519490 539 ntBASIC3.32□□□□□ -1.88
SMIM28A0A1B0GU29 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC3.32□□□□□ -1.88
SMIM28A0A1B0GU29 AC104027.1-201ENST00000521887 300 ntBASIC3.32□□□□□ -1.88
SMIM28A0A1B0GU29 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.32□□□□□ -1.88
SMIM28A0A1B0GU29 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC3.32□□□□□ -1.88
SMIM28A0A1B0GU29 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC3.32□□□□□ -1.88
SMIM28A0A1B0GU29 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC3.32□□□□□ -1.88
SMIM28A0A1B0GU29 Z82195.1-201ENST00000604558 398 ntBASIC3.32□□□□□ -1.88
SMIM28A0A1B0GU29 AC018754.1-201ENST00000607486 925 ntBASIC3.32□□□□□ -1.88
SMIM28A0A1B0GU29 AF129408.1-201ENST00000608767 431 ntBASIC3.32□□□□□ -1.88
SMIM28A0A1B0GU29 U1.23-201ENST00000610293 146 ntBASIC3.32□□□□□ -1.88
SMIM28A0A1B0GU29 AL591516.1-201ENST00000611326 274 ntBASIC3.32□□□□□ -1.88
SMIM28A0A1B0GU29 RNU1-68P-201ENST00000615382 146 ntBASIC3.32□□□□□ -1.88
SMIM28A0A1B0GU29 AC018816.2-201ENST00000621460 353 ntBASIC3.32□□□□□ -1.88
SMIM28A0A1B0GU29 U1.39-201ENST00000621562 146 ntBASIC3.32□□□□□ -1.88
SMIM28A0A1B0GU29 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC3.32□□□□□ -1.88
SMIM28A0A1B0GU29 AC006065.5-201ENST00000623427 349 ntBASIC3.32□□□□□ -1.88
SMIM28A0A1B0GU29 AP003476.1-201ENST00000623984 516 ntBASIC3.32□□□□□ -1.88
SMIM28A0A1B0GU29 AC138649.5-201ENST00000637456 137 ntBASIC3.32□□□□□ -1.88
SMIM28A0A1B0GU29 AC099654.8-201ENST00000637757 681 ntBASIC3.32□□□□□ -1.88
SMIM28A0A1B0GU29 AL645568.2-201ENST00000432815 1337 ntBASIC3.32□□□□□ -1.88
SMIM28A0A1B0GU29 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.32□□□□□ -1.88
SMIM28A0A1B0GU29 SGO1P1-201ENST00000603525 1447 ntBASIC3.32□□□□□ -1.88
SMIM28A0A1B0GU29 RIOK3P1-201ENST00000418778 1528 ntBASIC3.32□□□□□ -1.88
SMIM28A0A1B0GU29 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
SMIM28A0A1B0GU29 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
SMIM28A0A1B0GU29 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
SMIM28A0A1B0GU29 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
SMIM28A0A1B0GU29 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.31□□□□□ -1.88
SMIM28A0A1B0GU29 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC3.31□□□□□ -1.88
SMIM28A0A1B0GU29 MTND4P10-201ENST00000446199 1363 ntBASIC3.31□□□□□ -1.88
SMIM28A0A1B0GU29 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
SMIM28A0A1B0GU29 RNU1-140P-201ENST00000365040 165 ntBASIC3.31□□□□□ -1.88
SMIM28A0A1B0GU29 RNU6-1000P-201ENST00000391066 106 ntBASIC3.31□□□□□ -1.88
SMIM28A0A1B0GU29 RPL7P25-201ENST00000404151 721 ntBASIC3.31□□□□□ -1.88
SMIM28A0A1B0GU29 AMD1P2-201ENST00000412936 992 ntBASIC3.31□□□□□ -1.88
SMIM28A0A1B0GU29 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC3.31□□□□□ -1.88
SMIM28A0A1B0GU29 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3.31□□□□□ -1.88
SMIM28A0A1B0GU29 C1DP1-201ENST00000426049 402 ntBASIC3.31□□□□□ -1.88
SMIM28A0A1B0GU29 AC092634.2-201ENST00000428146 1010 ntBASIC3.31□□□□□ -1.88
SMIM28A0A1B0GU29 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC3.31□□□□□ -1.88
SMIM28A0A1B0GU29 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
SMIM28A0A1B0GU29 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC3.31□□□□□ -1.88
SMIM28A0A1B0GU29 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC3.31□□□□□ -1.88
SMIM28A0A1B0GU29 NANOGNBP1-201ENST00000448444 480 ntBASIC3.31□□□□□ -1.88
SMIM28A0A1B0GU29 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.31□□□□□ -1.88
SMIM28A0A1B0GU29 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC3.31□□□□□ -1.88
SMIM28A0A1B0GU29 MTATP6P14-201ENST00000455189 673 ntBASIC3.31□□□□□ -1.88
SMIM28A0A1B0GU29 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC3.31□□□□□ -1.88
SMIM28A0A1B0GU29 TMED11P-201ENST00000479478 690 ntBASIC3.31□□□□□ -1.88
SMIM28A0A1B0GU29 RPL5P23-201ENST00000496040 868 ntBASIC3.31□□□□□ -1.88
SMIM28A0A1B0GU29 AC080014.1-201ENST00000496877 1201 ntBASIC3.31□□□□□ -1.88
SMIM28A0A1B0GU29 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms