Protein–RNA interactions for Protein: A0A087WSZ9

TRAV30, T-cell receptor alpha variable 30 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV30A0A087WSZ9 AC008716.1-201ENST00000511084 513 ntBASIC2.19□□□□□ -2.06
TRAV30A0A087WSZ9 AC026412.2-201ENST00000512270 1075 ntBASIC2.19□□□□□ -2.06
TRAV30A0A087WSZ9 RNA5SP82-201ENST00000516707 92 ntBASIC2.19□□□□□ -2.06
TRAV30A0A087WSZ9 AC026241.1-201ENST00000517873 2142 ntBASIC2.19□□□□□ -2.06
TRAV30A0A087WSZ9 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC2.19□□□□□ -2.06
TRAV30A0A087WSZ9 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC2.19□□□□□ -2.06
TRAV30A0A087WSZ9 MYL12BP1-201ENST00000569826 507 ntBASIC2.19□□□□□ -2.06
TRAV30A0A087WSZ9 MIR4444-1-201ENST00000581696 74 ntBASIC2.19□□□□□ -2.06
TRAV30A0A087WSZ9 MIR4444-2-201ENST00000584390 74 ntBASIC2.19□□□□□ -2.06
TRAV30A0A087WSZ9 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
TRAV30A0A087WSZ9 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
TRAV30A0A087WSZ9 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.19□□□□□ -2.06
TRAV30A0A087WSZ9 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.19□□□□□ -2.06
TRAV30A0A087WSZ9 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC2.18□□□□□ -2.06
TRAV30A0A087WSZ9 PABPC1P9-201ENST00000426076 1612 ntBASIC2.18□□□□□ -2.06
TRAV30A0A087WSZ9 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.18□□□□□ -2.06
TRAV30A0A087WSZ9 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC2.18□□□□□ -2.06
TRAV30A0A087WSZ9 RNU1-140P-201ENST00000365040 165 ntBASIC2.18□□□□□ -2.06
TRAV30A0A087WSZ9 MIR670-201ENST00000390142 98 ntBASIC2.18□□□□□ -2.06
TRAV30A0A087WSZ9 RNA5SP181-201ENST00000410246 98 ntBASIC2.18□□□□□ -2.06
TRAV30A0A087WSZ9 MTND4P11-201ENST00000417020 1058 ntBASIC2.18□□□□□ -2.06
TRAV30A0A087WSZ9 TOMM22P1-201ENST00000418578 312 ntBASIC2.18□□□□□ -2.06
TRAV30A0A087WSZ9 AC005517.2-201ENST00000424673 553 ntBASIC2.18□□□□□ -2.06
TRAV30A0A087WSZ9 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.18□□□□□ -2.06
TRAV30A0A087WSZ9 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC2.18□□□□□ -2.06
TRAV30A0A087WSZ9 RPS15AP7-201ENST00000439294 405 ntBASIC2.18□□□□□ -2.06
TRAV30A0A087WSZ9 AL590399.6-201ENST00000446396 307 ntBASIC2.18□□□□□ -2.06
TRAV30A0A087WSZ9 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.18□□□□□ -2.06
TRAV30A0A087WSZ9 Z99714.1-201ENST00000450463 807 ntBASIC2.18□□□□□ -2.06
TRAV30A0A087WSZ9 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC2.18□□□□□ -2.06
TRAV30A0A087WSZ9 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC2.18□□□□□ -2.06
TRAV30A0A087WSZ9 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC2.18□□□□□ -2.06
TRAV30A0A087WSZ9 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
TRAV30A0A087WSZ9 NAMPTP2-201ENST00000505629 1115 ntBASIC2.18□□□□□ -2.06
TRAV30A0A087WSZ9 RNA5SP402-201ENST00000517148 110 ntBASIC2.18□□□□□ -2.06
TRAV30A0A087WSZ9 AC019227.1-201ENST00000526902 510 ntBASIC2.18□□□□□ -2.06
TRAV30A0A087WSZ9 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC2.18□□□□□ -2.06
TRAV30A0A087WSZ9 AL121594.4-201ENST00000556211 1196 ntBASIC2.18□□□□□ -2.06
TRAV30A0A087WSZ9 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC2.18□□□□□ -2.06
TRAV30A0A087WSZ9 ACTR3BP3-201ENST00000565577 979 ntBASIC2.18□□□□□ -2.06
TRAV30A0A087WSZ9 AP001029.3-201ENST00000588063 596 ntBASIC2.18□□□□□ -2.06
TRAV30A0A087WSZ9 AC060766.3-201ENST00000591442 263 ntBASIC2.18□□□□□ -2.06
TRAV30A0A087WSZ9 AC012493.2-201ENST00000595083 291 ntBASIC2.18□□□□□ -2.06
TRAV30A0A087WSZ9 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.18□□□□□ -2.06
TRAV30A0A087WSZ9 AC239803.2-201ENST00000610161 430 ntBASIC2.18□□□□□ -2.06
TRAV30A0A087WSZ9 FRG1DP-201ENST00000635586 771 ntBASIC2.18□□□□□ -2.06
TRAV30A0A087WSZ9 MIR4496-201ENST00000635896 61 ntBASIC2.18□□□□□ -2.06
TRAV30A0A087WSZ9 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
TRAV30A0A087WSZ9 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
TRAV30A0A087WSZ9 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.18□□□□□ -2.06
TRAV30A0A087WSZ9 ZNF734P-201ENST00000419494 1534 ntBASIC2.17□□□□□ -2.06
TRAV30A0A087WSZ9 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
TRAV30A0A087WSZ9 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
TRAV30A0A087WSZ9 SNORA67.1-201ENST00000364749 141 ntBASIC2.17□□□□□ -2.06
TRAV30A0A087WSZ9 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC2.17□□□□□ -2.06
TRAV30A0A087WSZ9 SNORD21-201ENST00000383953 95 ntBASIC2.17□□□□□ -2.06
TRAV30A0A087WSZ9 AL590290.1-201ENST00000405336 380 ntBASIC2.17□□□□□ -2.06
TRAV30A0A087WSZ9 AL024507.1-201ENST00000412741 274 ntBASIC2.17□□□□□ -2.06
TRAV30A0A087WSZ9 AC080125.1-201ENST00000414888 684 ntBASIC2.17□□□□□ -2.06
TRAV30A0A087WSZ9 AL513477.1-202ENST00000417061 214 ntBASIC2.17□□□□□ -2.06
TRAV30A0A087WSZ9 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC2.17□□□□□ -2.06
TRAV30A0A087WSZ9 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC2.17□□□□□ -2.06
TRAV30A0A087WSZ9 TEX41-209ENST00000451478 452 ntTSL 2 BASIC2.17□□□□□ -2.06
TRAV30A0A087WSZ9 AC003982.1-202ENST00000469928 248 ntBASIC2.17□□□□□ -2.06
TRAV30A0A087WSZ9 RAD51AP1P1-201ENST00000484195 1001 ntBASIC2.17□□□□□ -2.06
TRAV30A0A087WSZ9 AC135721.1-201ENST00000497954 479 ntBASIC2.17□□□□□ -2.06
TRAV30A0A087WSZ9 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
TRAV30A0A087WSZ9 RN7SKP40-201ENST00000517211 242 ntBASIC2.17□□□□□ -2.06
TRAV30A0A087WSZ9 RNU1-104P-201ENST00000517280 175 ntBASIC2.17□□□□□ -2.06
TRAV30A0A087WSZ9 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.17□□□□□ -2.06
TRAV30A0A087WSZ9 AC109635.4-202ENST00000531666 412 ntBASIC2.17□□□□□ -2.06
TRAV30A0A087WSZ9 AL355836.1-201ENST00000555951 870 ntBASIC2.17□□□□□ -2.06
TRAV30A0A087WSZ9 CFL2-206ENST00000556161 546 ntTSL 4 BASIC2.17□□□□□ -2.06
TRAV30A0A087WSZ9 MIR3944-201ENST00000581277 108 ntBASIC2.17□□□□□ -2.06
TRAV30A0A087WSZ9 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC2.17□□□□□ -2.06
TRAV30A0A087WSZ9 AC024153.1-201ENST00000603103 365 ntBASIC2.17□□□□□ -2.06
TRAV30A0A087WSZ9 AC069304.3-201ENST00000603938 1084 ntBASIC2.17□□□□□ -2.06
TRAV30A0A087WSZ9 AL159169.3-201ENST00000608871 561 ntBASIC2.17□□□□□ -2.06
TRAV30A0A087WSZ9 AL592494.3-201ENST00000609485 464 ntBASIC2.17□□□□□ -2.06
TRAV30A0A087WSZ9 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
TRAV30A0A087WSZ9 OR8B1P-202ENST00000641132 1178 ntBASIC2.17□□□□□ -2.06
TRAV30A0A087WSZ9 PABPC1P7-201ENST00000413177 1513 ntBASIC2.17□□□□□ -2.06
TRAV30A0A087WSZ9 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC2.17□□□□□ -2.06
TRAV30A0A087WSZ9 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
TRAV30A0A087WSZ9 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.16□□□□□ -2.06
TRAV30A0A087WSZ9 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
TRAV30A0A087WSZ9 SNORA71.3-201ENST00000362582 128 ntBASIC2.16□□□□□ -2.06
TRAV30A0A087WSZ9 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC2.16□□□□□ -2.06
TRAV30A0A087WSZ9 AC023347.2-201ENST00000433994 462 ntBASIC2.16□□□□□ -2.06
TRAV30A0A087WSZ9 ST13P20-201ENST00000447996 1065 ntBASIC2.16□□□□□ -2.06
TRAV30A0A087WSZ9 NDUFAF4P3-201ENST00000456468 525 ntBASIC2.16□□□□□ -2.06
TRAV30A0A087WSZ9 RPL7P49-201ENST00000471402 708 ntBASIC2.16□□□□□ -2.06
TRAV30A0A087WSZ9 AC087879.1-201ENST00000474343 374 ntBASIC2.16□□□□□ -2.06
TRAV30A0A087WSZ9 LARP7P4-201ENST00000481075 878 ntBASIC2.16□□□□□ -2.06
TRAV30A0A087WSZ9 AC023424.2-201ENST00000493479 777 ntBASIC2.16□□□□□ -2.06
TRAV30A0A087WSZ9 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC2.16□□□□□ -2.06
TRAV30A0A087WSZ9 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC2.16□□□□□ -2.06
TRAV30A0A087WSZ9 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC2.16□□□□□ -2.06
TRAV30A0A087WSZ9 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.16□□□□□ -2.06
TRAV30A0A087WSZ9 TPMTP1-201ENST00000592307 737 ntBASIC2.16□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 123.7 ms