Protein–RNA interactions for Protein: Q9Y6R9

CCDC61, Coiled-coil domain-containing protein 61, humanhuman

Predictions only

Length 512 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61Q9Y6R9 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC8.12□□□□□ -1.11
CCDC61Q9Y6R9 ACA59.1-201ENST00000515966 143 ntBASIC8.12□□□□□ -1.11
CCDC61Q9Y6R9 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC8.12□□□□□ -1.11
CCDC61Q9Y6R9 TXNP4-201ENST00000575018 310 ntBASIC8.12□□□□□ -1.11
CCDC61Q9Y6R9 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC8.12□□□□□ -1.11
CCDC61Q9Y6R9 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC8.12□□□□□ -1.11
CCDC61Q9Y6R9 RPL7P50-201ENST00000600588 727 ntBASIC8.12□□□□□ -1.11
CCDC61Q9Y6R9 AL359881.1-201ENST00000602916 267 ntBASIC8.12□□□□□ -1.11
CCDC61Q9Y6R9 uc_338.26-201ENST00000612659 160 ntBASIC8.12□□□□□ -1.11
CCDC61Q9Y6R9 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC8.12□□□□□ -1.11
CCDC61Q9Y6R9 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC8.12□□□□□ -1.11
CCDC61Q9Y6R9 AC092828.1-201ENST00000501211 5391 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
CCDC61Q9Y6R9 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
CCDC61Q9Y6R9 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
CCDC61Q9Y6R9 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC8.12□□□□□ -1.11
CCDC61Q9Y6R9 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC8.12□□□□□ -1.11
CCDC61Q9Y6R9 FREM2-201ENST00000280481 16070 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
CCDC61Q9Y6R9 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC8.12□□□□□ -1.11
CCDC61Q9Y6R9 SPIRE1-206ENST00000453447 2107 ntTSL 5 BASIC8.12□□□□□ -1.11
CCDC61Q9Y6R9 WNK3-203ENST00000375169 11172 ntAPPRIS ALT1 TSL 5 BASIC8.12□□□□□ -1.11
CCDC61Q9Y6R9 DNAJC6-203ENST00000395325 5743 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
CCDC61Q9Y6R9 ASB8-201ENST00000317697 2615 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
CCDC61Q9Y6R9 CLTC-210ENST00000579456 2301 ntTSL 5 BASIC8.12□□□□□ -1.11
CCDC61Q9Y6R9 LY86-AS1-202ENST00000435641 2819 ntTSL 2 BASIC8.11□□□□□ -1.11
CCDC61Q9Y6R9 EXOC5P1-201ENST00000510543 1969 ntBASIC8.11□□□□□ -1.11
CCDC61Q9Y6R9 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC8.11□□□□□ -1.11
CCDC61Q9Y6R9 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
CCDC61Q9Y6R9 XIST-206ENST00000434839 2865 ntTSL 5 BASIC8.11□□□□□ -1.11
CCDC61Q9Y6R9 RBBP8P1-201ENST00000449447 1844 ntBASIC8.11□□□□□ -1.11
CCDC61Q9Y6R9 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC8.11□□□□□ -1.11
CCDC61Q9Y6R9 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
CCDC61Q9Y6R9 Y_RNA.27-201ENST00000362540 103 ntBASIC8.11□□□□□ -1.11
CCDC61Q9Y6R9 RN7SKP124-201ENST00000364730 341 ntBASIC8.11□□□□□ -1.11
CCDC61Q9Y6R9 RNU6-708P-201ENST00000384217 107 ntBASIC8.11□□□□□ -1.11
CCDC61Q9Y6R9 Y_RNA.568-201ENST00000384742 113 ntBASIC8.11□□□□□ -1.11
CCDC61Q9Y6R9 AL034379.1-201ENST00000423216 253 ntBASIC8.11□□□□□ -1.11
CCDC61Q9Y6R9 AL162725.1-201ENST00000435405 301 ntBASIC8.11□□□□□ -1.11
CCDC61Q9Y6R9 FRG2FP-204ENST00000453982 852 ntBASIC8.11□□□□□ -1.11
CCDC61Q9Y6R9 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC8.11□□□□□ -1.11
CCDC61Q9Y6R9 Y_RNA.719-201ENST00000517156 106 ntBASIC8.11□□□□□ -1.11
CCDC61Q9Y6R9 AC109479.2-201ENST00000517842 174 ntBASIC8.11□□□□□ -1.11
CCDC61Q9Y6R9 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
CCDC61Q9Y6R9 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC8.11□□□□□ -1.11
CCDC61Q9Y6R9 HCG18-243ENST00000602498 327 ntTSL 3 BASIC8.11□□□□□ -1.11
CCDC61Q9Y6R9 ELOCP5-201ENST00000604924 333 ntBASIC8.11□□□□□ -1.11
CCDC61Q9Y6R9 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC8.11□□□□□ -1.11
CCDC61Q9Y6R9 AC000123.2-201ENST00000623124 461 ntBASIC8.11□□□□□ -1.11
CCDC61Q9Y6R9 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
CCDC61Q9Y6R9 AC008725.1-201ENST00000605123 2263 ntBASIC8.11□□□□□ -1.11
CCDC61Q9Y6R9 MUC4-209ENST00000463781 17110 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
CCDC61Q9Y6R9 COLCA1-205ENST00000620864 8098 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
CCDC61Q9Y6R9 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC8.11□□□□□ -1.11
CCDC61Q9Y6R9 ZBTB25-204ENST00000608382 10372 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
CCDC61Q9Y6R9 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
CCDC61Q9Y6R9 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC8.11□□□□□ -1.11
CCDC61Q9Y6R9 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
CCDC61Q9Y6R9 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
CCDC61Q9Y6R9 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
CCDC61Q9Y6R9 ZEB2-227ENST00000627532 9541 ntAPPRIS P2 TSL 1 (best) BASIC8.1□□□□□ -1.11
CCDC61Q9Y6R9 AL662795.2-201ENST00000624252 3706 ntBASIC8.1□□□□□ -1.11
CCDC61Q9Y6R9 USP9X-201ENST00000324545 12401 ntTSL 5 BASIC8.1□□□□□ -1.11
CCDC61Q9Y6R9 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
CCDC61Q9Y6R9 Y_RNA.592-201ENST00000410274 109 ntBASIC8.1□□□□□ -1.11
CCDC61Q9Y6R9 AC017079.2-201ENST00000416102 485 ntBASIC8.1□□□□□ -1.11
CCDC61Q9Y6R9 AL355433.1-201ENST00000422804 300 ntBASIC8.1□□□□□ -1.11
CCDC61Q9Y6R9 TPT1P13-201ENST00000449760 499 ntBASIC8.1□□□□□ -1.11
CCDC61Q9Y6R9 ATP5LP5-201ENST00000483050 299 ntBASIC8.1□□□□□ -1.11
CCDC61Q9Y6R9 AC010469.2-201ENST00000496412 480 ntBASIC8.1□□□□□ -1.11
CCDC61Q9Y6R9 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC8.1□□□□□ -1.11
CCDC61Q9Y6R9 AC024451.1-201ENST00000508013 779 ntBASIC8.1□□□□□ -1.11
CCDC61Q9Y6R9 AC074133.1-201ENST00000515696 183 ntBASIC8.1□□□□□ -1.11
CCDC61Q9Y6R9 RNA5SP170-201ENST00000517150 101 ntBASIC8.1□□□□□ -1.11
CCDC61Q9Y6R9 RNU6-844P-201ENST00000517175 102 ntBASIC8.1□□□□□ -1.11
CCDC61Q9Y6R9 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC8.1□□□□□ -1.11
CCDC61Q9Y6R9 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC8.1□□□□□ -1.11
CCDC61Q9Y6R9 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC8.1□□□□□ -1.11
CCDC61Q9Y6R9 AC136932.1-201ENST00000574771 208 ntBASIC8.1□□□□□ -1.11
CCDC61Q9Y6R9 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC8.1□□□□□ -1.11
CCDC61Q9Y6R9 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
CCDC61Q9Y6R9 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
CCDC61Q9Y6R9 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
CCDC61Q9Y6R9 KCNJ15-220ENST00000612702 3046 ntAPPRIS P1 TSL 4 BASIC8.1□□□□□ -1.11
CCDC61Q9Y6R9 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC8.1□□□□□ -1.11
CCDC61Q9Y6R9 SRSF11-202ENST00000370950 3784 ntAPPRIS P3 TSL 1 (best) BASIC8.1□□□□□ -1.11
CCDC61Q9Y6R9 ARFGEF3-201ENST00000251691 14877 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
CCDC61Q9Y6R9 TXNRD1-205ENST00000503506 3930 ntAPPRIS P2 TSL 1 (best) BASIC8.1□□□□□ -1.11
CCDC61Q9Y6R9 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC8.09□□□□□ -1.11
CCDC61Q9Y6R9 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC8.09□□□□□ -1.11
CCDC61Q9Y6R9 ST8SIA5-203ENST00000538168 13761 ntTSL 2 BASIC8.09□□□□□ -1.11
CCDC61Q9Y6R9 ZNF385B-201ENST00000336917 2610 ntTSL 5 BASIC8.09□□□□□ -1.11
CCDC61Q9Y6R9 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
CCDC61Q9Y6R9 HSPD1P8-201ENST00000400121 1658 ntBASIC8.09□□□□□ -1.11
CCDC61Q9Y6R9 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC8.09□□□□□ -1.11
CCDC61Q9Y6R9 AC007842.1-201ENST00000597336 2039 ntBASIC8.09□□□□□ -1.11
CCDC61Q9Y6R9 NRXN3-203ENST00000428277 4219 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
CCDC61Q9Y6R9 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC8.09□□□□□ -1.11
CCDC61Q9Y6R9 AP001148.1-201ENST00000624124 2359 ntBASIC8.09□□□□□ -1.11
CCDC61Q9Y6R9 Y_RNA.292-201ENST00000364904 97 ntBASIC8.09□□□□□ -1.11
CCDC61Q9Y6R9 ADIG-201ENST00000373348 430 ntTSL 2 BASIC8.09□□□□□ -1.11
CCDC61Q9Y6R9 RNU6-131P-201ENST00000391144 107 ntBASIC8.09□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 130.4 ms