Protein–RNA interactions for Protein: Q9Y6N9

USH1C, Harmonin, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1CQ9Y6N9 AC098799.2-201ENST00000509466 868 ntBASIC2.96□□□□□ -1.94
USH1CQ9Y6N9 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC2.96□□□□□ -1.94
USH1CQ9Y6N9 AC007458.1-201ENST00000542812 373 ntBASIC2.96□□□□□ -1.94
USH1CQ9Y6N9 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC2.96□□□□□ -1.94
USH1CQ9Y6N9 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC2.96□□□□□ -1.94
USH1CQ9Y6N9 CCNG2P1-201ENST00000549521 1000 ntBASIC2.96□□□□□ -1.94
USH1CQ9Y6N9 ARL1-211ENST00000551828 776 ntTSL 5 BASIC2.96□□□□□ -1.94
USH1CQ9Y6N9 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC2.96□□□□□ -1.94
USH1CQ9Y6N9 AC090312.2-201ENST00000582687 378 ntBASIC2.96□□□□□ -1.94
USH1CQ9Y6N9 SRGNP1-201ENST00000603392 451 ntBASIC2.96□□□□□ -1.94
USH1CQ9Y6N9 AC079610.2-201ENST00000604818 690 ntBASIC2.96□□□□□ -1.94
USH1CQ9Y6N9 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
USH1CQ9Y6N9 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
USH1CQ9Y6N9 ZNF37BP-203ENST00000452306 1352 ntBASIC2.96□□□□□ -1.94
USH1CQ9Y6N9 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC2.96□□□□□ -1.94
USH1CQ9Y6N9 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC2.96□□□□□ -1.94
USH1CQ9Y6N9 GABRG2-229ENST00000641017 3628 ntBASIC2.95□□□□□ -1.94
USH1CQ9Y6N9 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
USH1CQ9Y6N9 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC2.95□□□□□ -1.94
USH1CQ9Y6N9 AC010733.2-201ENST00000589496 5702 ntBASIC2.95□□□□□ -1.94
USH1CQ9Y6N9 MIR208A-201ENST00000362287 71 ntBASIC2.95□□□□□ -1.94
USH1CQ9Y6N9 RNA5SP50-201ENST00000363731 107 ntBASIC2.95□□□□□ -1.94
USH1CQ9Y6N9 RNA5SP387-201ENST00000364226 106 ntBASIC2.95□□□□□ -1.94
USH1CQ9Y6N9 RNU6-1181P-201ENST00000384191 106 ntBASIC2.95□□□□□ -1.94
USH1CQ9Y6N9 SNORD67-201ENST00000390833 111 ntBASIC2.95□□□□□ -1.94
USH1CQ9Y6N9 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
USH1CQ9Y6N9 DSTNP4-201ENST00000399472 474 ntBASIC2.95□□□□□ -1.94
USH1CQ9Y6N9 RPL7P25-201ENST00000404151 721 ntBASIC2.95□□□□□ -1.94
USH1CQ9Y6N9 RPS3AP25-201ENST00000411660 793 ntBASIC2.95□□□□□ -1.94
USH1CQ9Y6N9 KRR1P1-201ENST00000419430 803 ntBASIC2.95□□□□□ -1.94
USH1CQ9Y6N9 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC2.95□□□□□ -1.94
USH1CQ9Y6N9 AL513175.1-201ENST00000431492 780 ntBASIC2.95□□□□□ -1.94
USH1CQ9Y6N9 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC2.95□□□□□ -1.94
USH1CQ9Y6N9 AC004865.1-201ENST00000442276 1003 ntBASIC2.95□□□□□ -1.94
USH1CQ9Y6N9 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC2.95□□□□□ -1.94
USH1CQ9Y6N9 SYPL1P1-201ENST00000473622 768 ntBASIC2.95□□□□□ -1.94
USH1CQ9Y6N9 RN7SL297P-201ENST00000483161 293 ntBASIC2.95□□□□□ -1.94
USH1CQ9Y6N9 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC2.95□□□□□ -1.94
USH1CQ9Y6N9 ARL4AP2-201ENST00000507378 601 ntBASIC2.95□□□□□ -1.94
USH1CQ9Y6N9 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC2.95□□□□□ -1.94
USH1CQ9Y6N9 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC2.95□□□□□ -1.94
USH1CQ9Y6N9 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC2.95□□□□□ -1.94
USH1CQ9Y6N9 AP004371.1-201ENST00000525240 214 ntBASIC2.95□□□□□ -1.94
USH1CQ9Y6N9 AC109635.4-202ENST00000531666 412 ntBASIC2.95□□□□□ -1.94
USH1CQ9Y6N9 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC2.95□□□□□ -1.94
USH1CQ9Y6N9 SETP2-201ENST00000553886 926 ntBASIC2.95□□□□□ -1.94
USH1CQ9Y6N9 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC2.95□□□□□ -1.94
USH1CQ9Y6N9 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC2.95□□□□□ -1.94
USH1CQ9Y6N9 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC2.95□□□□□ -1.94
USH1CQ9Y6N9 AL109653.1-201ENST00000603091 248 ntBASIC2.95□□□□□ -1.94
USH1CQ9Y6N9 AL355365.1-201ENST00000616480 294 ntBASIC2.95□□□□□ -1.94
USH1CQ9Y6N9 AC007318.2-201ENST00000620999 243 ntBASIC2.95□□□□□ -1.94
USH1CQ9Y6N9 AC010338.1-201ENST00000621823 717 ntBASIC2.95□□□□□ -1.94
USH1CQ9Y6N9 MTND5P28-201ENST00000438005 1594 ntBASIC2.95□□□□□ -1.94
USH1CQ9Y6N9 AC006378.2-201ENST00000623178 2476 ntBASIC2.95□□□□□ -1.94
USH1CQ9Y6N9 FAM35BP-202ENST00000497389 3337 ntBASIC2.94□□□□□ -1.94
USH1CQ9Y6N9 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
USH1CQ9Y6N9 AC104446.1-201ENST00000613728 1321 ntBASIC2.94□□□□□ -1.94
USH1CQ9Y6N9 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC2.94□□□□□ -1.94
USH1CQ9Y6N9 MTCO1P12-201ENST00000414273 1543 ntBASIC2.94□□□□□ -1.94
USH1CQ9Y6N9 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
USH1CQ9Y6N9 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
USH1CQ9Y6N9 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.94□□□□□ -1.94
USH1CQ9Y6N9 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC2.94□□□□□ -1.94
USH1CQ9Y6N9 Y_RNA.333-201ENST00000365274 102 ntBASIC2.94□□□□□ -1.94
USH1CQ9Y6N9 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC2.94□□□□□ -1.94
USH1CQ9Y6N9 RNU6-629P-201ENST00000384061 103 ntBASIC2.94□□□□□ -1.94
USH1CQ9Y6N9 SNORD15B-201ENST00000384714 146 ntBASIC2.94□□□□□ -1.94
USH1CQ9Y6N9 RNU2-17P-201ENST00000410290 190 ntBASIC2.94□□□□□ -1.94
USH1CQ9Y6N9 ZNF92P1Y-201ENST00000415010 1191 ntBASIC2.94□□□□□ -1.94
USH1CQ9Y6N9 RPS7P15-201ENST00000415804 584 ntBASIC2.94□□□□□ -1.94
USH1CQ9Y6N9 RPL7P10-201ENST00000417407 739 ntBASIC2.94□□□□□ -1.94
USH1CQ9Y6N9 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC2.94□□□□□ -1.94
USH1CQ9Y6N9 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC2.94□□□□□ -1.94
USH1CQ9Y6N9 RPL36P19-201ENST00000430744 301 ntBASIC2.94□□□□□ -1.94
USH1CQ9Y6N9 AC011242.1-201ENST00000433596 1158 ntBASIC2.94□□□□□ -1.94
USH1CQ9Y6N9 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC2.94□□□□□ -1.94
USH1CQ9Y6N9 ELOCP13-201ENST00000443934 329 ntBASIC2.94□□□□□ -1.94
USH1CQ9Y6N9 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC2.94□□□□□ -1.94
USH1CQ9Y6N9 AC233982.1-201ENST00000451247 436 ntBASIC2.94□□□□□ -1.94
USH1CQ9Y6N9 CYCSP35-201ENST00000451978 304 ntBASIC2.94□□□□□ -1.94
USH1CQ9Y6N9 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC2.94□□□□□ -1.94
USH1CQ9Y6N9 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC2.94□□□□□ -1.94
USH1CQ9Y6N9 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC2.94□□□□□ -1.94
USH1CQ9Y6N9 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC2.94□□□□□ -1.94
USH1CQ9Y6N9 RPS29P2-201ENST00000479278 136 ntBASIC2.94□□□□□ -1.94
USH1CQ9Y6N9 RN7SL293P-201ENST00000481765 281 ntBASIC2.94□□□□□ -1.94
USH1CQ9Y6N9 MTCO3P35-201ENST00000485582 781 ntBASIC2.94□□□□□ -1.94
USH1CQ9Y6N9 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC2.94□□□□□ -1.94
USH1CQ9Y6N9 ELOCP31-201ENST00000540463 467 ntBASIC2.94□□□□□ -1.94
USH1CQ9Y6N9 AC107016.2-201ENST00000547968 190 ntBASIC2.94□□□□□ -1.94
USH1CQ9Y6N9 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC2.94□□□□□ -1.94
USH1CQ9Y6N9 MTCYBP28-201ENST00000566728 1132 ntBASIC2.94□□□□□ -1.94
USH1CQ9Y6N9 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC2.94□□□□□ -1.94
USH1CQ9Y6N9 OR4G1P-201ENST00000588632 938 ntBASIC2.94□□□□□ -1.94
USH1CQ9Y6N9 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC2.94□□□□□ -1.94
USH1CQ9Y6N9 CKS1BP3-201ENST00000600888 237 ntBASIC2.94□□□□□ -1.94
USH1CQ9Y6N9 AL031985.2-201ENST00000600955 480 ntBASIC2.94□□□□□ -1.94
USH1CQ9Y6N9 AC090115.4-201ENST00000609970 188 ntBASIC2.94□□□□□ -1.94
USH1CQ9Y6N9 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC2.94□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 134.4 ms