Protein–RNA interactions for Protein: Q9Y3E1

HDGFL3, Hepatoma-derived growth factor-related protein 3, humanhuman

Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3Q9Y3E1 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
HDGFL3Q9Y3E1 FAM35CP-201ENST00000554755 2470 ntBASIC2.68□□□□□ -1.98
HDGFL3Q9Y3E1 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
HDGFL3Q9Y3E1 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
HDGFL3Q9Y3E1 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC2.68□□□□□ -1.98
HDGFL3Q9Y3E1 RPL23AP57-201ENST00000332361 466 ntBASIC2.68□□□□□ -1.98
HDGFL3Q9Y3E1 SNORA70.4-201ENST00000365509 134 ntBASIC2.68□□□□□ -1.98
HDGFL3Q9Y3E1 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
HDGFL3Q9Y3E1 MIR1250-201ENST00000408098 113 ntBASIC2.68□□□□□ -1.98
HDGFL3Q9Y3E1 RN7SKP58-201ENST00000411010 305 ntBASIC2.68□□□□□ -1.98
HDGFL3Q9Y3E1 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
HDGFL3Q9Y3E1 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC2.68□□□□□ -1.98
HDGFL3Q9Y3E1 AL390023.1-201ENST00000428836 262 ntBASIC2.68□□□□□ -1.98
HDGFL3Q9Y3E1 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC2.68□□□□□ -1.98
HDGFL3Q9Y3E1 YWHAZP7-201ENST00000436906 631 ntBASIC2.68□□□□□ -1.98
HDGFL3Q9Y3E1 RPS3AP12-201ENST00000443616 753 ntBASIC2.68□□□□□ -1.98
HDGFL3Q9Y3E1 ELOCP13-201ENST00000443934 329 ntBASIC2.68□□□□□ -1.98
HDGFL3Q9Y3E1 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC2.68□□□□□ -1.98
HDGFL3Q9Y3E1 RPS15AP1-201ENST00000457423 391 ntBASIC2.68□□□□□ -1.98
HDGFL3Q9Y3E1 RPL21P8-201ENST00000465083 535 ntBASIC2.68□□□□□ -1.98
HDGFL3Q9Y3E1 SYPL1P1-201ENST00000473622 768 ntBASIC2.68□□□□□ -1.98
HDGFL3Q9Y3E1 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC2.68□□□□□ -1.98
HDGFL3Q9Y3E1 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC2.68□□□□□ -1.98
HDGFL3Q9Y3E1 SNORA70.24-201ENST00000517233 118 ntBASIC2.68□□□□□ -1.98
HDGFL3Q9Y3E1 AC009812.2-201ENST00000517657 457 ntBASIC2.68□□□□□ -1.98
HDGFL3Q9Y3E1 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC2.68□□□□□ -1.98
HDGFL3Q9Y3E1 AP004371.1-201ENST00000525240 214 ntBASIC2.68□□□□□ -1.98
HDGFL3Q9Y3E1 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
HDGFL3Q9Y3E1 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC2.68□□□□□ -1.98
HDGFL3Q9Y3E1 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
HDGFL3Q9Y3E1 AC109635.4-202ENST00000531666 412 ntBASIC2.68□□□□□ -1.98
HDGFL3Q9Y3E1 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC2.68□□□□□ -1.98
HDGFL3Q9Y3E1 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC2.68□□□□□ -1.98
HDGFL3Q9Y3E1 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC2.68□□□□□ -1.98
HDGFL3Q9Y3E1 MIR4325-201ENST00000583049 90 ntBASIC2.68□□□□□ -1.98
HDGFL3Q9Y3E1 CBX3P2-202ENST00000583365 535 ntBASIC2.68□□□□□ -1.98
HDGFL3Q9Y3E1 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC2.68□□□□□ -1.98
HDGFL3Q9Y3E1 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC2.68□□□□□ -1.98
HDGFL3Q9Y3E1 AL133393.1-201ENST00000603277 287 ntBASIC2.68□□□□□ -1.98
HDGFL3Q9Y3E1 AC007566.2-201ENST00000603642 413 ntBASIC2.68□□□□□ -1.98
HDGFL3Q9Y3E1 AC069234.5-201ENST00000611056 416 ntBASIC2.68□□□□□ -1.98
HDGFL3Q9Y3E1 U73479.1-201ENST00000618062 168 ntBASIC2.68□□□□□ -1.98
HDGFL3Q9Y3E1 AC007318.2-201ENST00000620999 243 ntBASIC2.68□□□□□ -1.98
HDGFL3Q9Y3E1 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC2.68□□□□□ -1.98
HDGFL3Q9Y3E1 LRRC77P-213ENST00000637727 880 ntBASIC2.68□□□□□ -1.98
HDGFL3Q9Y3E1 MTND4P8-201ENST00000514997 1362 ntBASIC2.68□□□□□ -1.98
HDGFL3Q9Y3E1 AL353743.1-202ENST00000431724 1695 ntBASIC2.68□□□□□ -1.98
HDGFL3Q9Y3E1 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
HDGFL3Q9Y3E1 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC2.68□□□□□ -1.98
HDGFL3Q9Y3E1 AC073055.1-201ENST00000456901 1621 ntBASIC2.68□□□□□ -1.98
HDGFL3Q9Y3E1 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
HDGFL3Q9Y3E1 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
HDGFL3Q9Y3E1 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
HDGFL3Q9Y3E1 THUMPD3P1-201ENST00000506556 1480 ntBASIC2.67□□□□□ -1.98
HDGFL3Q9Y3E1 SNORA9.2-201ENST00000365361 133 ntBASIC2.67□□□□□ -1.98
HDGFL3Q9Y3E1 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
HDGFL3Q9Y3E1 MIR142-201ENST00000384835 87 ntBASIC2.67□□□□□ -1.98
HDGFL3Q9Y3E1 SAR1AP2-201ENST00000392696 594 ntBASIC2.67□□□□□ -1.98
HDGFL3Q9Y3E1 UBE2Q2P12-201ENST00000414573 204 ntBASIC2.67□□□□□ -1.98
HDGFL3Q9Y3E1 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
HDGFL3Q9Y3E1 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC2.67□□□□□ -1.98
HDGFL3Q9Y3E1 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC2.67□□□□□ -1.98
HDGFL3Q9Y3E1 AC097499.1-201ENST00000444277 208 ntBASIC2.67□□□□□ -1.98
HDGFL3Q9Y3E1 AC112492.1-201ENST00000449607 712 ntBASIC2.67□□□□□ -1.98
HDGFL3Q9Y3E1 RPS24P6-201ENST00000452670 400 ntBASIC2.67□□□□□ -1.98
HDGFL3Q9Y3E1 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.67□□□□□ -1.98
HDGFL3Q9Y3E1 snoU13.22-201ENST00000459428 104 ntBASIC2.67□□□□□ -1.98
HDGFL3Q9Y3E1 RPS17P11-201ENST00000474297 293 ntBASIC2.67□□□□□ -1.98
HDGFL3Q9Y3E1 RPS29P2-201ENST00000479278 136 ntBASIC2.67□□□□□ -1.98
HDGFL3Q9Y3E1 RPL7P23-201ENST00000493874 747 ntBASIC2.67□□□□□ -1.98
HDGFL3Q9Y3E1 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC2.67□□□□□ -1.98
HDGFL3Q9Y3E1 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
HDGFL3Q9Y3E1 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC2.67□□□□□ -1.98
HDGFL3Q9Y3E1 AC074050.1-201ENST00000563247 211 ntBASIC2.67□□□□□ -1.98
HDGFL3Q9Y3E1 AC078899.3-201ENST00000599065 212 ntBASIC2.67□□□□□ -1.98
HDGFL3Q9Y3E1 AC091488.1-201ENST00000604239 660 ntBASIC2.67□□□□□ -1.98
HDGFL3Q9Y3E1 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
HDGFL3Q9Y3E1 AL627309.6-201ENST00000606857 840 ntBASIC2.67□□□□□ -1.98
HDGFL3Q9Y3E1 AC004832.5-201ENST00000608677 401 ntBASIC2.67□□□□□ -1.98
HDGFL3Q9Y3E1 AL590282.1-201ENST00000610379 1136 ntBASIC2.67□□□□□ -1.98
HDGFL3Q9Y3E1 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.67□□□□□ -1.98
HDGFL3Q9Y3E1 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC2.67□□□□□ -1.98
HDGFL3Q9Y3E1 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC2.67□□□□□ -1.98
HDGFL3Q9Y3E1 U6.107-201ENST00000637108 79 ntBASIC2.67□□□□□ -1.98
HDGFL3Q9Y3E1 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC2.67□□□□□ -1.98
HDGFL3Q9Y3E1 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC2.67□□□□□ -1.98
HDGFL3Q9Y3E1 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC2.66□□□□□ -1.98
HDGFL3Q9Y3E1 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.66□□□□□ -1.98
HDGFL3Q9Y3E1 RNU1-140P-201ENST00000365040 165 ntBASIC2.66□□□□□ -1.98
HDGFL3Q9Y3E1 U8.9-201ENST00000365667 134 ntBASIC2.66□□□□□ -1.98
HDGFL3Q9Y3E1 AL353692.2-201ENST00000407054 335 ntBASIC2.66□□□□□ -1.98
HDGFL3Q9Y3E1 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC2.66□□□□□ -1.98
HDGFL3Q9Y3E1 VTA1P1-201ENST00000414044 866 ntBASIC2.66□□□□□ -1.98
HDGFL3Q9Y3E1 AL139281.1-201ENST00000422120 335 ntBASIC2.66□□□□□ -1.98
HDGFL3Q9Y3E1 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC2.66□□□□□ -1.98
HDGFL3Q9Y3E1 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC2.66□□□□□ -1.98
HDGFL3Q9Y3E1 RPL21P40-201ENST00000428586 483 ntBASIC2.66□□□□□ -1.98
HDGFL3Q9Y3E1 AC022018.1-201ENST00000430685 241 ntBASIC2.66□□□□□ -1.98
HDGFL3Q9Y3E1 AL513175.1-201ENST00000431492 780 ntBASIC2.66□□□□□ -1.98
HDGFL3Q9Y3E1 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms