Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 ZNF885P-201ENST00000420174 1098 ntBASIC4.02□□□□□ -1.77
SIX4Q9UIU6 MTCO3P1-205ENST00000422088 832 ntBASIC4.02□□□□□ -1.77
SIX4Q9UIU6 AL138785.1-201ENST00000425821 331 ntBASIC4.02□□□□□ -1.77
SIX4Q9UIU6 RPP40P1-201ENST00000426762 456 ntBASIC4.02□□□□□ -1.77
SIX4Q9UIU6 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
SIX4Q9UIU6 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC4.02□□□□□ -1.77
SIX4Q9UIU6 AC010881.1-201ENST00000433830 235 ntBASIC4.02□□□□□ -1.77
SIX4Q9UIU6 AC129850.1-201ENST00000436203 508 ntBASIC4.02□□□□□ -1.77
SIX4Q9UIU6 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC4.02□□□□□ -1.77
SIX4Q9UIU6 MTCO2P7-201ENST00000446518 666 ntBASIC4.02□□□□□ -1.77
SIX4Q9UIU6 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC4.02□□□□□ -1.77
SIX4Q9UIU6 MTCO3P16-201ENST00000454456 754 ntBASIC4.02□□□□□ -1.77
SIX4Q9UIU6 AC133473.1-201ENST00000455173 299 ntBASIC4.02□□□□□ -1.77
SIX4Q9UIU6 ACTR3P3-201ENST00000480448 893 ntBASIC4.02□□□□□ -1.77
SIX4Q9UIU6 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC4.02□□□□□ -1.77
SIX4Q9UIU6 AC093281.2-201ENST00000510153 597 ntBASIC4.02□□□□□ -1.77
SIX4Q9UIU6 LTV1P1-201ENST00000510683 1237 ntBASIC4.02□□□□□ -1.77
SIX4Q9UIU6 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC4.02□□□□□ -1.77
SIX4Q9UIU6 RNU6-1261P-201ENST00000517194 104 ntBASIC4.02□□□□□ -1.77
SIX4Q9UIU6 NAT2-202ENST00000520116 716 ntTSL 3 BASIC4.02□□□□□ -1.77
SIX4Q9UIU6 SUMO2P20-201ENST00000520803 283 ntBASIC4.02□□□□□ -1.77
SIX4Q9UIU6 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC4.02□□□□□ -1.77
SIX4Q9UIU6 REXO2-218ENST00000544827 880 ntTSL 3 BASIC4.02□□□□□ -1.77
SIX4Q9UIU6 GTF2IP22-201ENST00000554443 182 ntBASIC4.02□□□□□ -1.77
SIX4Q9UIU6 AC012435.1-202ENST00000568772 240 ntBASIC4.02□□□□□ -1.77
SIX4Q9UIU6 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
SIX4Q9UIU6 AC017100.2-201ENST00000584628 355 ntBASIC4.02□□□□□ -1.77
SIX4Q9UIU6 AC012557.2-201ENST00000605919 418 ntBASIC4.02□□□□□ -1.77
SIX4Q9UIU6 AC006270.3-201ENST00000605967 1036 ntBASIC4.02□□□□□ -1.77
SIX4Q9UIU6 AC245297.2-201ENST00000610119 565 ntBASIC4.02□□□□□ -1.77
SIX4Q9UIU6 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
SIX4Q9UIU6 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.02□□□□□ -1.77
SIX4Q9UIU6 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
SIX4Q9UIU6 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
SIX4Q9UIU6 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
SIX4Q9UIU6 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC4.02□□□□□ -1.77
SIX4Q9UIU6 AL122126.1-201ENST00000546905 1318 ntBASIC4.01□□□□□ -1.77
SIX4Q9UIU6 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.01□□□□□ -1.77
SIX4Q9UIU6 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.01□□□□□ -1.77
SIX4Q9UIU6 CDR1-202ENST00000625883 1485 ntBASIC4.01□□□□□ -1.77
SIX4Q9UIU6 RN7SKP44-201ENST00000363602 316 ntBASIC4.01□□□□□ -1.77
SIX4Q9UIU6 RNU4-24P-201ENST00000364565 139 ntBASIC4.01□□□□□ -1.77
SIX4Q9UIU6 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC4.01□□□□□ -1.77
SIX4Q9UIU6 RNA5SP424-201ENST00000390988 115 ntBASIC4.01□□□□□ -1.77
SIX4Q9UIU6 AL031577.2-201ENST00000404133 280 ntBASIC4.01□□□□□ -1.77
SIX4Q9UIU6 HNRNPDP2-201ENST00000406475 478 ntBASIC4.01□□□□□ -1.77
SIX4Q9UIU6 RPL23AP48-201ENST00000406913 488 ntBASIC4.01□□□□□ -1.77
SIX4Q9UIU6 RNU6-920P-201ENST00000410926 92 ntBASIC4.01□□□□□ -1.77
SIX4Q9UIU6 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC4.01□□□□□ -1.77
SIX4Q9UIU6 AC018644.1-201ENST00000429934 551 ntBASIC4.01□□□□□ -1.77
SIX4Q9UIU6 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC4.01□□□□□ -1.77
SIX4Q9UIU6 RPL37P1-201ENST00000432310 284 ntBASIC4.01□□□□□ -1.77
SIX4Q9UIU6 YWHAZP8-201ENST00000436935 731 ntBASIC4.01□□□□□ -1.77
SIX4Q9UIU6 AL356535.1-201ENST00000440335 398 ntBASIC4.01□□□□□ -1.77
SIX4Q9UIU6 OR6C5P-201ENST00000452388 923 ntBASIC4.01□□□□□ -1.77
SIX4Q9UIU6 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC4.01□□□□□ -1.77
SIX4Q9UIU6 AC098824.1-201ENST00000453565 980 ntBASIC4.01□□□□□ -1.77
SIX4Q9UIU6 FGF7P3-201ENST00000454645 303 ntBASIC4.01□□□□□ -1.77
SIX4Q9UIU6 AC022034.3-201ENST00000471393 478 ntBASIC4.01□□□□□ -1.77
SIX4Q9UIU6 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC4.01□□□□□ -1.77
SIX4Q9UIU6 RPL7P38-201ENST00000488396 739 ntBASIC4.01□□□□□ -1.77
SIX4Q9UIU6 RPS6P4-201ENST00000494693 758 ntBASIC4.01□□□□□ -1.77
SIX4Q9UIU6 AC104685.1-201ENST00000502445 371 ntBASIC4.01□□□□□ -1.77
SIX4Q9UIU6 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC4.01□□□□□ -1.77
SIX4Q9UIU6 MTCO1P30-201ENST00000515244 580 ntBASIC4.01□□□□□ -1.77
SIX4Q9UIU6 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC4.01□□□□□ -1.77
SIX4Q9UIU6 RNU6-678P-201ENST00000516832 109 ntBASIC4.01□□□□□ -1.77
SIX4Q9UIU6 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC4.01□□□□□ -1.77
SIX4Q9UIU6 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC4.01□□□□□ -1.77
SIX4Q9UIU6 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.01□□□□□ -1.77
SIX4Q9UIU6 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC4.01□□□□□ -1.77
SIX4Q9UIU6 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC4.01□□□□□ -1.77
SIX4Q9UIU6 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC4.01□□□□□ -1.77
SIX4Q9UIU6 WISP1-OT1-201ENST00000602893 642 ntBASIC4.01□□□□□ -1.77
SIX4Q9UIU6 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC4.01□□□□□ -1.77
SIX4Q9UIU6 AC073114.1-201ENST00000612027 490 ntBASIC4.01□□□□□ -1.77
SIX4Q9UIU6 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC4.01□□□□□ -1.77
SIX4Q9UIU6 MAPK10-372ENST00000641954 3413 ntBASIC4.01□□□□□ -1.77
SIX4Q9UIU6 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC4.01□□□□□ -1.77
SIX4Q9UIU6 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC4.01□□□□□ -1.77
SIX4Q9UIU6 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4.01□□□□□ -1.77
SIX4Q9UIU6 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
SIX4Q9UIU6 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
SIX4Q9UIU6 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC4.01□□□□□ -1.77
SIX4Q9UIU6 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
SIX4Q9UIU6 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4□□□□□ -1.77
SIX4Q9UIU6 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4□□□□□ -1.77
SIX4Q9UIU6 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
SIX4Q9UIU6 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4□□□□□ -1.77
SIX4Q9UIU6 AL390862.1-201ENST00000635467 1469 ntBASIC4□□□□□ -1.77
SIX4Q9UIU6 MFSD8-236ENST00000641509 4050 ntBASIC4□□□□□ -1.77
SIX4Q9UIU6 ZNF285B-201ENST00000561698 1767 ntBASIC4□□□□□ -1.77
SIX4Q9UIU6 Y_RNA.77-201ENST00000362962 107 ntBASIC4□□□□□ -1.77
SIX4Q9UIU6 SNORA73.2-201ENST00000364946 201 ntBASIC4□□□□□ -1.77
SIX4Q9UIU6 RPS3AP26-201ENST00000398259 784 ntBASIC4□□□□□ -1.77
SIX4Q9UIU6 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC4□□□□□ -1.77
SIX4Q9UIU6 MTCO3P31-201ENST00000405526 789 ntBASIC4□□□□□ -1.77
SIX4Q9UIU6 AL450338.1-201ENST00000407987 512 ntBASIC4□□□□□ -1.77
SIX4Q9UIU6 RNU6ATAC-201ENST00000408749 126 ntBASIC4□□□□□ -1.77
SIX4Q9UIU6 NPM1P11-201ENST00000417106 855 ntBASIC4□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 85.5 ms