Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC2.89□□□□□ -1.95
VAPAQ9P0L0 AC006130.2-201ENST00000586202 326 ntBASIC2.89□□□□□ -1.95
VAPAQ9P0L0 AC078899.3-201ENST00000599065 212 ntBASIC2.89□□□□□ -1.95
VAPAQ9P0L0 XIAPP1-201ENST00000603162 600 ntBASIC2.89□□□□□ -1.95
VAPAQ9P0L0 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC2.89□□□□□ -1.95
VAPAQ9P0L0 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC2.89□□□□□ -1.95
VAPAQ9P0L0 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
VAPAQ9P0L0 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC2.89□□□□□ -1.95
VAPAQ9P0L0 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
VAPAQ9P0L0 FRG1DP-201ENST00000635586 771 ntBASIC2.89□□□□□ -1.95
VAPAQ9P0L0 FTO-223ENST00000640179 210 ntTSL 5 BASIC2.89□□□□□ -1.95
VAPAQ9P0L0 AC010733.2-201ENST00000589496 5702 ntBASIC2.89□□□□□ -1.95
VAPAQ9P0L0 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
VAPAQ9P0L0 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
VAPAQ9P0L0 AL645568.2-201ENST00000432815 1337 ntBASIC2.89□□□□□ -1.95
VAPAQ9P0L0 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
VAPAQ9P0L0 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
VAPAQ9P0L0 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC2.88□□□□□ -1.95
VAPAQ9P0L0 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.88□□□□□ -1.95
VAPAQ9P0L0 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
VAPAQ9P0L0 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
VAPAQ9P0L0 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
VAPAQ9P0L0 RNA5SP258-201ENST00000362750 119 ntBASIC2.88□□□□□ -1.95
VAPAQ9P0L0 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC2.88□□□□□ -1.95
VAPAQ9P0L0 RNU6-339P-201ENST00000384310 107 ntBASIC2.88□□□□□ -1.95
VAPAQ9P0L0 RNU6-441P-201ENST00000384545 106 ntBASIC2.88□□□□□ -1.95
VAPAQ9P0L0 MIR554-201ENST00000384874 96 ntBASIC2.88□□□□□ -1.95
VAPAQ9P0L0 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
VAPAQ9P0L0 RNU1-101P-201ENST00000391171 127 ntBASIC2.88□□□□□ -1.95
VAPAQ9P0L0 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
VAPAQ9P0L0 FABP12P1-201ENST00000401911 322 ntBASIC2.88□□□□□ -1.95
VAPAQ9P0L0 AL356057.1-202ENST00000402263 756 ntBASIC2.88□□□□□ -1.95
VAPAQ9P0L0 RPL36AP36-201ENST00000418616 301 ntBASIC2.88□□□□□ -1.95
VAPAQ9P0L0 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC2.88□□□□□ -1.95
VAPAQ9P0L0 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC2.88□□□□□ -1.95
VAPAQ9P0L0 YWHAZP7-201ENST00000436906 631 ntBASIC2.88□□□□□ -1.95
VAPAQ9P0L0 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC2.88□□□□□ -1.95
VAPAQ9P0L0 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC2.88□□□□□ -1.95
VAPAQ9P0L0 AL513321.1-201ENST00000441175 761 ntBASIC2.88□□□□□ -1.95
VAPAQ9P0L0 AC007000.2-201ENST00000442564 487 ntBASIC2.88□□□□□ -1.95
VAPAQ9P0L0 RSL24D1P2-201ENST00000445584 366 ntBASIC2.88□□□□□ -1.95
VAPAQ9P0L0 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC2.88□□□□□ -1.95
VAPAQ9P0L0 Z75741.1-201ENST00000446793 314 ntBASIC2.88□□□□□ -1.95
VAPAQ9P0L0 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC2.88□□□□□ -1.95
VAPAQ9P0L0 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC2.88□□□□□ -1.95
VAPAQ9P0L0 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC2.88□□□□□ -1.95
VAPAQ9P0L0 RNU6-775P-201ENST00000459318 96 ntBASIC2.88□□□□□ -1.95
VAPAQ9P0L0 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC2.88□□□□□ -1.95
VAPAQ9P0L0 AC017015.1-201ENST00000477387 286 ntBASIC2.88□□□□□ -1.95
VAPAQ9P0L0 AC068587.1-201ENST00000483613 781 ntBASIC2.88□□□□□ -1.95
VAPAQ9P0L0 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC2.88□□□□□ -1.95
VAPAQ9P0L0 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
VAPAQ9P0L0 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC2.88□□□□□ -1.95
VAPAQ9P0L0 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC2.88□□□□□ -1.95
VAPAQ9P0L0 AC103833.1-201ENST00000517442 172 ntBASIC2.88□□□□□ -1.95
VAPAQ9P0L0 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC2.88□□□□□ -1.95
VAPAQ9P0L0 CD69-203ENST00000536709 1020 ntTSL 2 BASIC2.88□□□□□ -1.95
VAPAQ9P0L0 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC2.88□□□□□ -1.95
VAPAQ9P0L0 AL157394.1-201ENST00000562983 1224 ntBASIC2.88□□□□□ -1.95
VAPAQ9P0L0 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC2.88□□□□□ -1.95
VAPAQ9P0L0 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC2.88□□□□□ -1.95
VAPAQ9P0L0 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC2.88□□□□□ -1.95
VAPAQ9P0L0 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC2.88□□□□□ -1.95
VAPAQ9P0L0 AC021851.1-201ENST00000608537 1082 ntBASIC2.88□□□□□ -1.95
VAPAQ9P0L0 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC2.88□□□□□ -1.95
VAPAQ9P0L0 AC068831.7-201ENST00000616954 363 ntBASIC2.88□□□□□ -1.95
VAPAQ9P0L0 AC138932.5-201ENST00000617759 563 ntBASIC2.88□□□□□ -1.95
VAPAQ9P0L0 AC073569.3-201ENST00000619055 682 ntBASIC2.88□□□□□ -1.95
VAPAQ9P0L0 AL356863.1-201ENST00000623378 1080 ntBASIC2.88□□□□□ -1.95
VAPAQ9P0L0 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC2.88□□□□□ -1.95
VAPAQ9P0L0 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
VAPAQ9P0L0 MTND5P11-201ENST00000511037 1812 ntBASIC2.88□□□□□ -1.95
VAPAQ9P0L0 AL355596.1-201ENST00000565399 3996 ntBASIC2.88□□□□□ -1.95
VAPAQ9P0L0 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
VAPAQ9P0L0 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC2.87□□□□□ -1.95
VAPAQ9P0L0 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC2.87□□□□□ -1.95
VAPAQ9P0L0 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.87□□□□□ -1.95
VAPAQ9P0L0 RNU6-989P-201ENST00000362756 107 ntBASIC2.87□□□□□ -1.95
VAPAQ9P0L0 RNVU1-3-201ENST00000364313 161 ntBASIC2.87□□□□□ -1.95
VAPAQ9P0L0 U8.9-201ENST00000365667 134 ntBASIC2.87□□□□□ -1.95
VAPAQ9P0L0 SNORA7.4-201ENST00000384249 137 ntBASIC2.87□□□□□ -1.95
VAPAQ9P0L0 ATF1P1-201ENST00000406040 927 ntBASIC2.87□□□□□ -1.95
VAPAQ9P0L0 MRPL50P2-201ENST00000416821 482 ntBASIC2.87□□□□□ -1.95
VAPAQ9P0L0 AC073310.1-201ENST00000423226 1033 ntBASIC2.87□□□□□ -1.95
VAPAQ9P0L0 RPF2P1-201ENST00000424137 906 ntBASIC2.87□□□□□ -1.95
VAPAQ9P0L0 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC2.87□□□□□ -1.95
VAPAQ9P0L0 AC073508.1-201ENST00000428866 656 ntBASIC2.87□□□□□ -1.95
VAPAQ9P0L0 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC2.87□□□□□ -1.95
VAPAQ9P0L0 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
VAPAQ9P0L0 TRIM60P13-201ENST00000432350 1283 ntBASIC2.87□□□□□ -1.95
VAPAQ9P0L0 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC2.87□□□□□ -1.95
VAPAQ9P0L0 PTP4A1P3-201ENST00000433661 420 ntBASIC2.87□□□□□ -1.95
VAPAQ9P0L0 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC2.87□□□□□ -1.95
VAPAQ9P0L0 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC2.87□□□□□ -1.95
VAPAQ9P0L0 AC016696.1-201ENST00000446949 318 ntBASIC2.87□□□□□ -1.95
VAPAQ9P0L0 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC2.87□□□□□ -1.95
VAPAQ9P0L0 RPS17P11-201ENST00000474297 293 ntBASIC2.87□□□□□ -1.95
VAPAQ9P0L0 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC2.87□□□□□ -1.95
VAPAQ9P0L0 AC110794.1-201ENST00000505816 425 ntBASIC2.87□□□□□ -1.95
VAPAQ9P0L0 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC2.87□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 158.4 ms