Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
NCKIPSDQ9NZQ3 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
NCKIPSDQ9NZQ3 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC4.24□□□□□ -1.73
NCKIPSDQ9NZQ3 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.23□□□□□ -1.73
NCKIPSDQ9NZQ3 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.23□□□□□ -1.73
NCKIPSDQ9NZQ3 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.23□□□□□ -1.73
NCKIPSDQ9NZQ3 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
NCKIPSDQ9NZQ3 AL139811.1-201ENST00000424779 2299 ntBASIC4.23□□□□□ -1.73
NCKIPSDQ9NZQ3 SNRPEP3-201ENST00000338402 276 ntBASIC4.23□□□□□ -1.73
NCKIPSDQ9NZQ3 U3.4-201ENST00000363352 213 ntBASIC4.23□□□□□ -1.73
NCKIPSDQ9NZQ3 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.23□□□□□ -1.73
NCKIPSDQ9NZQ3 OR5H15-201ENST00000383696 930 ntBASIC4.23□□□□□ -1.73
NCKIPSDQ9NZQ3 RNU6-253P-201ENST00000384730 105 ntBASIC4.23□□□□□ -1.73
NCKIPSDQ9NZQ3 AL450338.1-201ENST00000407987 512 ntBASIC4.23□□□□□ -1.73
NCKIPSDQ9NZQ3 Y_RNA.619-201ENST00000410951 90 ntBASIC4.23□□□□□ -1.73
NCKIPSDQ9NZQ3 OFD1P11Y-201ENST00000418213 1177 ntBASIC4.23□□□□□ -1.73
NCKIPSDQ9NZQ3 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC4.23□□□□□ -1.73
NCKIPSDQ9NZQ3 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
NCKIPSDQ9NZQ3 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC4.23□□□□□ -1.73
NCKIPSDQ9NZQ3 RPS24P1-201ENST00000438550 371 ntBASIC4.23□□□□□ -1.73
NCKIPSDQ9NZQ3 RPL23AP52-201ENST00000439311 478 ntBASIC4.23□□□□□ -1.73
NCKIPSDQ9NZQ3 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC4.23□□□□□ -1.73
NCKIPSDQ9NZQ3 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC4.23□□□□□ -1.73
NCKIPSDQ9NZQ3 ZNF114P1-201ENST00000453500 292 ntBASIC4.23□□□□□ -1.73
NCKIPSDQ9NZQ3 AC107401.1-201ENST00000503426 685 ntBASIC4.23□□□□□ -1.73
NCKIPSDQ9NZQ3 DSTNP2-201ENST00000504533 515 ntBASIC4.23□□□□□ -1.73
NCKIPSDQ9NZQ3 AC004069.2-201ENST00000505438 1114 ntBASIC4.23□□□□□ -1.73
NCKIPSDQ9NZQ3 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC4.23□□□□□ -1.73
NCKIPSDQ9NZQ3 AC091965.2-201ENST00000512324 613 ntBASIC4.23□□□□□ -1.73
NCKIPSDQ9NZQ3 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC4.23□□□□□ -1.73
NCKIPSDQ9NZQ3 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
NCKIPSDQ9NZQ3 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC4.23□□□□□ -1.73
NCKIPSDQ9NZQ3 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.23□□□□□ -1.73
NCKIPSDQ9NZQ3 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
NCKIPSDQ9NZQ3 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.23□□□□□ -1.73
NCKIPSDQ9NZQ3 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC4.23□□□□□ -1.73
NCKIPSDQ9NZQ3 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC4.23□□□□□ -1.73
NCKIPSDQ9NZQ3 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.23□□□□□ -1.73
NCKIPSDQ9NZQ3 AL389895.1-201ENST00000554127 252 ntBASIC4.23□□□□□ -1.73
NCKIPSDQ9NZQ3 AC006362.1-201ENST00000567392 174 ntBASIC4.23□□□□□ -1.73
NCKIPSDQ9NZQ3 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC4.23□□□□□ -1.73
NCKIPSDQ9NZQ3 BNIP3P33-201ENST00000598912 569 ntBASIC4.23□□□□□ -1.73
NCKIPSDQ9NZQ3 U73023.1-201ENST00000603134 700 ntBASIC4.23□□□□□ -1.73
NCKIPSDQ9NZQ3 AP003117.2-201ENST00000606010 545 ntBASIC4.23□□□□□ -1.73
NCKIPSDQ9NZQ3 AC092354.2-201ENST00000607786 514 ntBASIC4.23□□□□□ -1.73
NCKIPSDQ9NZQ3 AC024560.3-201ENST00000608482 349 ntBASIC4.23□□□□□ -1.73
NCKIPSDQ9NZQ3 RDM1-219ENST00000615378 542 ntTSL 3 BASIC4.23□□□□□ -1.73
NCKIPSDQ9NZQ3 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.23□□□□□ -1.73
NCKIPSDQ9NZQ3 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.23□□□□□ -1.73
NCKIPSDQ9NZQ3 AC009509.4-201ENST00000619202 509 ntBASIC4.23□□□□□ -1.73
NCKIPSDQ9NZQ3 AC092650.2-201ENST00000619984 902 ntBASIC4.23□□□□□ -1.73
NCKIPSDQ9NZQ3 AC009878.1-201ENST00000621819 340 ntBASIC4.23□□□□□ -1.73
NCKIPSDQ9NZQ3 AC008785.1-201ENST00000624475 456 ntBASIC4.23□□□□□ -1.73
NCKIPSDQ9NZQ3 BMS1P21-201ENST00000634565 365 ntBASIC4.23□□□□□ -1.73
NCKIPSDQ9NZQ3 AC099063.3-201ENST00000642066 185 ntBASIC4.23□□□□□ -1.73
NCKIPSDQ9NZQ3 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
NCKIPSDQ9NZQ3 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
NCKIPSDQ9NZQ3 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
NCKIPSDQ9NZQ3 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
NCKIPSDQ9NZQ3 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
NCKIPSDQ9NZQ3 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
NCKIPSDQ9NZQ3 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.23□□□□□ -1.73
NCKIPSDQ9NZQ3 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
NCKIPSDQ9NZQ3 OR5BR1P-201ENST00000524992 1330 ntBASIC4.22□□□□□ -1.73
NCKIPSDQ9NZQ3 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC4.22□□□□□ -1.73
NCKIPSDQ9NZQ3 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
NCKIPSDQ9NZQ3 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
NCKIPSDQ9NZQ3 AC018555.1-201ENST00000567548 1980 ntBASIC4.22□□□□□ -1.73
NCKIPSDQ9NZQ3 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
NCKIPSDQ9NZQ3 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
NCKIPSDQ9NZQ3 SNORA48.7-201ENST00000391302 135 ntBASIC4.22□□□□□ -1.73
NCKIPSDQ9NZQ3 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
NCKIPSDQ9NZQ3 RPL23AP29-201ENST00000397284 453 ntBASIC4.22□□□□□ -1.73
NCKIPSDQ9NZQ3 MIR1284-201ENST00000408337 120 ntBASIC4.22□□□□□ -1.73
NCKIPSDQ9NZQ3 OR8G2P-201ENST00000412796 908 ntBASIC4.22□□□□□ -1.73
NCKIPSDQ9NZQ3 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC4.22□□□□□ -1.73
NCKIPSDQ9NZQ3 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC4.22□□□□□ -1.73
NCKIPSDQ9NZQ3 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC4.22□□□□□ -1.73
NCKIPSDQ9NZQ3 OR4C10P-201ENST00000434991 931 ntBASIC4.22□□□□□ -1.73
NCKIPSDQ9NZQ3 LARP1BP3-201ENST00000437229 869 ntBASIC4.22□□□□□ -1.73
NCKIPSDQ9NZQ3 AC122718.1-201ENST00000439448 744 ntBASIC4.22□□□□□ -1.73
NCKIPSDQ9NZQ3 MTND2P20-201ENST00000440805 661 ntBASIC4.22□□□□□ -1.73
NCKIPSDQ9NZQ3 TRIM60P18-201ENST00000441518 828 ntBASIC4.22□□□□□ -1.73
NCKIPSDQ9NZQ3 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC4.22□□□□□ -1.73
NCKIPSDQ9NZQ3 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC4.22□□□□□ -1.73
NCKIPSDQ9NZQ3 FAM133DP-201ENST00000464802 691 ntBASIC4.22□□□□□ -1.73
NCKIPSDQ9NZQ3 FPGT-203ENST00000467578 601 ntTSL 2 BASIC4.22□□□□□ -1.73
NCKIPSDQ9NZQ3 AC006517.1-201ENST00000480485 328 ntBASIC4.22□□□□□ -1.73
NCKIPSDQ9NZQ3 RN7SL691P-201ENST00000494487 301 ntBASIC4.22□□□□□ -1.73
NCKIPSDQ9NZQ3 AC104164.2-201ENST00000496953 495 ntBASIC4.22□□□□□ -1.73
NCKIPSDQ9NZQ3 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC4.22□□□□□ -1.73
NCKIPSDQ9NZQ3 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC4.22□□□□□ -1.73
NCKIPSDQ9NZQ3 SLC25A15P5-201ENST00000508033 253 ntBASIC4.22□□□□□ -1.73
NCKIPSDQ9NZQ3 AC093281.2-201ENST00000510153 597 ntBASIC4.22□□□□□ -1.73
NCKIPSDQ9NZQ3 AF213884.2-201ENST00000510417 903 ntBASIC4.22□□□□□ -1.73
NCKIPSDQ9NZQ3 AC026412.2-201ENST00000512270 1075 ntBASIC4.22□□□□□ -1.73
NCKIPSDQ9NZQ3 RNA5SP49-201ENST00000516450 115 ntBASIC4.22□□□□□ -1.73
NCKIPSDQ9NZQ3 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC4.22□□□□□ -1.73
NCKIPSDQ9NZQ3 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC4.22□□□□□ -1.73
NCKIPSDQ9NZQ3 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 119.8 ms