Protein–RNA interactions for Protein: Q9NT62

ATG3, Ubiquitin-like-conjugating enzyme ATG3, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3Q9NT62 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC6.05□□□□□ -1.44
ATG3Q9NT62 AC012507.3-201ENST00000603556 477 ntBASIC6.05□□□□□ -1.44
ATG3Q9NT62 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC6.05□□□□□ -1.44
ATG3Q9NT62 AC114781.5-201ENST00000615297 108 ntBASIC6.05□□□□□ -1.44
ATG3Q9NT62 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
ATG3Q9NT62 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
ATG3Q9NT62 MED23-203ENST00000368058 4576 ntTSL 5 BASIC6.05□□□□□ -1.44
ATG3Q9NT62 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC6.05□□□□□ -1.44
ATG3Q9NT62 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC6.05□□□□□ -1.44
ATG3Q9NT62 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
ATG3Q9NT62 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
ATG3Q9NT62 OR5BR1P-201ENST00000524992 1330 ntBASIC6.04□□□□□ -1.44
ATG3Q9NT62 CROT-204ENST00000442291 1993 ntTSL 5 BASIC6.04□□□□□ -1.44
ATG3Q9NT62 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC6.04□□□□□ -1.44
ATG3Q9NT62 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC6.04□□□□□ -1.44
ATG3Q9NT62 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC6.04□□□□□ -1.44
ATG3Q9NT62 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC6.04□□□□□ -1.44
ATG3Q9NT62 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
ATG3Q9NT62 CARF-203ENST00000414439 2099 ntTSL 2 BASIC6.04□□□□□ -1.44
ATG3Q9NT62 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC6.04□□□□□ -1.44
ATG3Q9NT62 Y_RNA.145-201ENST00000363527 102 ntBASIC6.04□□□□□ -1.44
ATG3Q9NT62 RNU6-533P-201ENST00000384144 107 ntBASIC6.04□□□□□ -1.44
ATG3Q9NT62 Y_RNA.459-201ENST00000384251 102 ntBASIC6.04□□□□□ -1.44
ATG3Q9NT62 SNORA37-201ENST00000384504 129 ntBASIC6.04□□□□□ -1.44
ATG3Q9NT62 MIR559-201ENST00000385188 96 ntBASIC6.04□□□□□ -1.44
ATG3Q9NT62 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
ATG3Q9NT62 OR1AA1P-201ENST00000419597 916 ntBASIC6.04□□□□□ -1.44
ATG3Q9NT62 AC048351.1-201ENST00000420064 602 ntBASIC6.04□□□□□ -1.44
ATG3Q9NT62 AL365400.1-201ENST00000431854 640 ntBASIC6.04□□□□□ -1.44
ATG3Q9NT62 AC092162.1-201ENST00000432828 434 ntBASIC6.04□□□□□ -1.44
ATG3Q9NT62 BMS1P19-201ENST00000433925 393 ntBASIC6.04□□□□□ -1.44
ATG3Q9NT62 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC6.04□□□□□ -1.44
ATG3Q9NT62 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC6.04□□□□□ -1.44
ATG3Q9NT62 CYCSP34-201ENST00000458172 304 ntBASIC6.04□□□□□ -1.44
ATG3Q9NT62 AC091153.1-201ENST00000466297 402 ntBASIC6.04□□□□□ -1.44
ATG3Q9NT62 AC017037.1-201ENST00000508460 471 ntBASIC6.04□□□□□ -1.44
ATG3Q9NT62 KCTD9P2-201ENST00000512203 1013 ntBASIC6.04□□□□□ -1.44
ATG3Q9NT62 AC010493.1-201ENST00000513479 292 ntBASIC6.04□□□□□ -1.44
ATG3Q9NT62 RNU7-30P-201ENST00000516835 62 ntBASIC6.04□□□□□ -1.44
ATG3Q9NT62 RNU2-46P-201ENST00000517038 113 ntBASIC6.04□□□□□ -1.44
ATG3Q9NT62 AC105031.1-201ENST00000518550 476 ntBASIC6.04□□□□□ -1.44
ATG3Q9NT62 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC6.04□□□□□ -1.44
ATG3Q9NT62 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
ATG3Q9NT62 CYCSP29-201ENST00000533731 318 ntBASIC6.04□□□□□ -1.44
ATG3Q9NT62 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC6.04□□□□□ -1.44
ATG3Q9NT62 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC6.04□□□□□ -1.44
ATG3Q9NT62 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC6.04□□□□□ -1.44
ATG3Q9NT62 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC6.04□□□□□ -1.44
ATG3Q9NT62 AC010680.4-201ENST00000605334 543 ntBASIC6.04□□□□□ -1.44
ATG3Q9NT62 AC090948.1-201ENST00000607464 549 ntBASIC6.04□□□□□ -1.44
ATG3Q9NT62 AC005332.6-201ENST00000613178 446 ntBASIC6.04□□□□□ -1.44
ATG3Q9NT62 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
ATG3Q9NT62 TPTEP1-208ENST00000636884 213 ntBASIC6.04□□□□□ -1.44
ATG3Q9NT62 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
ATG3Q9NT62 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC6.04□□□□□ -1.44
ATG3Q9NT62 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC6.04□□□□□ -1.44
ATG3Q9NT62 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
ATG3Q9NT62 AC025031.4-201ENST00000621248 3271 ntBASIC6.04□□□□□ -1.44
ATG3Q9NT62 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
ATG3Q9NT62 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC6.04□□□□□ -1.44
ATG3Q9NT62 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC6.04□□□□□ -1.44
ATG3Q9NT62 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC6.04□□□□□ -1.44
ATG3Q9NT62 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
ATG3Q9NT62 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
ATG3Q9NT62 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC6.03□□□□□ -1.44
ATG3Q9NT62 AP000756.2-201ENST00000624168 2567 ntBASIC6.03□□□□□ -1.44
ATG3Q9NT62 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC6.03□□□□□ -1.44
ATG3Q9NT62 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
ATG3Q9NT62 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
ATG3Q9NT62 Y_RNA.133-201ENST00000363428 110 ntBASIC6.03□□□□□ -1.44
ATG3Q9NT62 RNU6-1339P-201ENST00000363574 91 ntBASIC6.03□□□□□ -1.44
ATG3Q9NT62 SNORA57.1-201ENST00000391227 145 ntBASIC6.03□□□□□ -1.44
ATG3Q9NT62 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
ATG3Q9NT62 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC6.03□□□□□ -1.44
ATG3Q9NT62 PIGFP2-201ENST00000421400 651 ntBASIC6.03□□□□□ -1.44
ATG3Q9NT62 RAD23BP1-201ENST00000421404 1227 ntBASIC6.03□□□□□ -1.44
ATG3Q9NT62 EIF1P3-201ENST00000423841 334 ntBASIC6.03□□□□□ -1.44
ATG3Q9NT62 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC6.03□□□□□ -1.44
ATG3Q9NT62 RPL35AP21-201ENST00000437667 333 ntBASIC6.03□□□□□ -1.44
ATG3Q9NT62 RPL7P54-201ENST00000438336 674 ntBASIC6.03□□□□□ -1.44
ATG3Q9NT62 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC6.03□□□□□ -1.44
ATG3Q9NT62 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC6.03□□□□□ -1.44
ATG3Q9NT62 RPL23AP20-201ENST00000447965 421 ntBASIC6.03□□□□□ -1.44
ATG3Q9NT62 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC6.03□□□□□ -1.44
ATG3Q9NT62 RPL21P6-201ENST00000479171 504 ntBASIC6.03□□□□□ -1.44
ATG3Q9NT62 SNORA19.2-201ENST00000516013 114 ntBASIC6.03□□□□□ -1.44
ATG3Q9NT62 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC6.03□□□□□ -1.44
ATG3Q9NT62 RGS5-218ENST00000526176 574 ntTSL 4 BASIC6.03□□□□□ -1.44
ATG3Q9NT62 AP000790.1-201ENST00000528891 737 ntBASIC6.03□□□□□ -1.44
ATG3Q9NT62 DERA-209ENST00000532964 854 ntTSL 5 BASIC6.03□□□□□ -1.44
ATG3Q9NT62 AP003034.1-201ENST00000534621 422 ntBASIC6.03□□□□□ -1.44
ATG3Q9NT62 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC6.03□□□□□ -1.44
ATG3Q9NT62 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC6.03□□□□□ -1.44
ATG3Q9NT62 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC6.03□□□□□ -1.44
ATG3Q9NT62 DNAJC8P1-201ENST00000554535 372 ntBASIC6.03□□□□□ -1.44
ATG3Q9NT62 AC138915.2-201ENST00000569776 97 ntBASIC6.03□□□□□ -1.44
ATG3Q9NT62 AC141257.3-201ENST00000572906 215 ntBASIC6.03□□□□□ -1.44
ATG3Q9NT62 AC006272.2-201ENST00000594725 163 ntBASIC6.03□□□□□ -1.44
ATG3Q9NT62 AC007621.1-201ENST00000604544 437 ntBASIC6.03□□□□□ -1.44
ATG3Q9NT62 AC113139.1-201ENST00000605049 239 ntBASIC6.03□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 117.1 ms