Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 RN7SL504P-201ENST00000494496 287 ntBASIC3.04□□□□□ -1.92
TREX1Q9NSU2 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
TREX1Q9NSU2 AC074250.1-201ENST00000511117 192 ntBASIC3.04□□□□□ -1.92
TREX1Q9NSU2 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.04□□□□□ -1.92
TREX1Q9NSU2 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC3.04□□□□□ -1.92
TREX1Q9NSU2 AC083923.1-201ENST00000523708 376 ntBASIC3.04□□□□□ -1.92
TREX1Q9NSU2 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC3.04□□□□□ -1.92
TREX1Q9NSU2 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.04□□□□□ -1.92
TREX1Q9NSU2 MTCO3P24-201ENST00000572729 782 ntBASIC3.04□□□□□ -1.92
TREX1Q9NSU2 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.04□□□□□ -1.92
TREX1Q9NSU2 AP001029.3-201ENST00000588063 596 ntBASIC3.04□□□□□ -1.92
TREX1Q9NSU2 YPEL5P2-201ENST00000605553 359 ntBASIC3.04□□□□□ -1.92
TREX1Q9NSU2 AC107294.3-201ENST00000609211 526 ntBASIC3.04□□□□□ -1.92
TREX1Q9NSU2 AC020658.4-201ENST00000613987 684 ntBASIC3.04□□□□□ -1.92
TREX1Q9NSU2 AL162574.2-201ENST00000614618 657 ntBASIC3.04□□□□□ -1.92
TREX1Q9NSU2 AC007318.2-201ENST00000620999 243 ntBASIC3.04□□□□□ -1.92
TREX1Q9NSU2 FRG1DP-201ENST00000635586 771 ntBASIC3.04□□□□□ -1.92
TREX1Q9NSU2 AC017104.5-201ENST00000637647 639 ntBASIC3.04□□□□□ -1.92
TREX1Q9NSU2 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
TREX1Q9NSU2 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.04□□□□□ -1.92
TREX1Q9NSU2 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.04□□□□□ -1.92
TREX1Q9NSU2 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
TREX1Q9NSU2 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.04□□□□□ -1.92
TREX1Q9NSU2 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC3.03□□□□□ -1.92
TREX1Q9NSU2 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.03□□□□□ -1.92
TREX1Q9NSU2 MTCO1P18-201ENST00000455518 1419 ntBASIC3.03□□□□□ -1.92
TREX1Q9NSU2 MTND4P8-201ENST00000514997 1362 ntBASIC3.03□□□□□ -1.92
TREX1Q9NSU2 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
TREX1Q9NSU2 ENSAP3-201ENST00000312710 333 ntBASIC3.03□□□□□ -1.92
TREX1Q9NSU2 RNA5SP27-201ENST00000363839 119 ntBASIC3.03□□□□□ -1.92
TREX1Q9NSU2 ATF1P1-201ENST00000406040 927 ntBASIC3.03□□□□□ -1.92
TREX1Q9NSU2 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.03□□□□□ -1.92
TREX1Q9NSU2 UBE2V1P11-201ENST00000411559 285 ntBASIC3.03□□□□□ -1.92
TREX1Q9NSU2 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC3.03□□□□□ -1.92
TREX1Q9NSU2 AC109780.2-201ENST00000413467 845 ntBASIC3.03□□□□□ -1.92
TREX1Q9NSU2 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.03□□□□□ -1.92
TREX1Q9NSU2 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC3.03□□□□□ -1.92
TREX1Q9NSU2 PNRC2P1-201ENST00000423940 420 ntBASIC3.03□□□□□ -1.92
TREX1Q9NSU2 RPL23AP69-201ENST00000431134 458 ntBASIC3.03□□□□□ -1.92
TREX1Q9NSU2 AC011242.1-201ENST00000433596 1158 ntBASIC3.03□□□□□ -1.92
TREX1Q9NSU2 TRIM60P18-201ENST00000441518 828 ntBASIC3.03□□□□□ -1.92
TREX1Q9NSU2 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC3.03□□□□□ -1.92
TREX1Q9NSU2 AC140076.1-201ENST00000449897 361 ntBASIC3.03□□□□□ -1.92
TREX1Q9NSU2 PRSS3P4-201ENST00000453323 162 ntBASIC3.03□□□□□ -1.92
TREX1Q9NSU2 RN7SL807P-201ENST00000470923 297 ntBASIC3.03□□□□□ -1.92
TREX1Q9NSU2 RPL32P34-201ENST00000486380 400 ntBASIC3.03□□□□□ -1.92
TREX1Q9NSU2 RN7SL633P-201ENST00000488974 297 ntBASIC3.03□□□□□ -1.92
TREX1Q9NSU2 AL358832.1-201ENST00000497800 389 ntBASIC3.03□□□□□ -1.92
TREX1Q9NSU2 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC3.03□□□□□ -1.92
TREX1Q9NSU2 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC3.03□□□□□ -1.92
TREX1Q9NSU2 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC3.03□□□□□ -1.92
TREX1Q9NSU2 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.03□□□□□ -1.92
TREX1Q9NSU2 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC3.03□□□□□ -1.92
TREX1Q9NSU2 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.03□□□□□ -1.92
TREX1Q9NSU2 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.03□□□□□ -1.92
TREX1Q9NSU2 AL392048.1-201ENST00000613946 534 ntBASIC3.03□□□□□ -1.92
TREX1Q9NSU2 AC068831.7-201ENST00000616954 363 ntBASIC3.03□□□□□ -1.92
TREX1Q9NSU2 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.03□□□□□ -1.92
TREX1Q9NSU2 AC018926.3-201ENST00000618841 406 ntBASIC3.03□□□□□ -1.92
TREX1Q9NSU2 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.03□□□□□ -1.92
TREX1Q9NSU2 AC139713.2-210ENST00000641741 992 ntBASIC3.03□□□□□ -1.92
TREX1Q9NSU2 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.03□□□□□ -1.92
TREX1Q9NSU2 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.03□□□□□ -1.93
TREX1Q9NSU2 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.03□□□□□ -1.93
TREX1Q9NSU2 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
TREX1Q9NSU2 ZNF37BP-203ENST00000452306 1352 ntBASIC3.02□□□□□ -1.93
TREX1Q9NSU2 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC3.02□□□□□ -1.93
TREX1Q9NSU2 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
TREX1Q9NSU2 SNORA51.12-201ENST00000384448 134 ntBASIC3.02□□□□□ -1.93
TREX1Q9NSU2 RNA5SP171-201ENST00000391071 115 ntBASIC3.02□□□□□ -1.93
TREX1Q9NSU2 DSTNP4-201ENST00000399472 474 ntBASIC3.02□□□□□ -1.93
TREX1Q9NSU2 AL591034.1-201ENST00000407447 340 ntBASIC3.02□□□□□ -1.93
TREX1Q9NSU2 RN7SKP220-201ENST00000410611 288 ntBASIC3.02□□□□□ -1.93
TREX1Q9NSU2 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.02□□□□□ -1.93
TREX1Q9NSU2 UBE2V1P1-201ENST00000430836 445 ntBASIC3.02□□□□□ -1.93
TREX1Q9NSU2 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.02□□□□□ -1.93
TREX1Q9NSU2 RPL36AP33-201ENST00000450395 310 ntBASIC3.02□□□□□ -1.93
TREX1Q9NSU2 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.02□□□□□ -1.93
TREX1Q9NSU2 HMGB1P15-201ENST00000453854 435 ntBASIC3.02□□□□□ -1.93
TREX1Q9NSU2 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.02□□□□□ -1.93
TREX1Q9NSU2 RPS17P11-201ENST00000474297 293 ntBASIC3.02□□□□□ -1.93
TREX1Q9NSU2 RPS26P21-201ENST00000475397 348 ntBASIC3.02□□□□□ -1.93
TREX1Q9NSU2 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC3.02□□□□□ -1.93
TREX1Q9NSU2 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
TREX1Q9NSU2 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.02□□□□□ -1.93
TREX1Q9NSU2 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC3.02□□□□□ -1.93
TREX1Q9NSU2 AC239860.2-201ENST00000525886 270 ntBASIC3.02□□□□□ -1.93
TREX1Q9NSU2 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC3.02□□□□□ -1.93
TREX1Q9NSU2 AC019227.1-201ENST00000526902 510 ntBASIC3.02□□□□□ -1.93
TREX1Q9NSU2 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.02□□□□□ -1.93
TREX1Q9NSU2 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3.02□□□□□ -1.93
TREX1Q9NSU2 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
TREX1Q9NSU2 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.02□□□□□ -1.93
TREX1Q9NSU2 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.02□□□□□ -1.93
TREX1Q9NSU2 AC073387.2-201ENST00000604797 784 ntBASIC3.02□□□□□ -1.93
TREX1Q9NSU2 AC124312.4-201ENST00000605533 310 ntBASIC3.02□□□□□ -1.93
TREX1Q9NSU2 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.02□□□□□ -1.93
TREX1Q9NSU2 VIS1.1-201ENST00000610517 203 ntBASIC3.02□□□□□ -1.93
TREX1Q9NSU2 AC084757.4-201ENST00000616350 526 ntBASIC3.02□□□□□ -1.93
TREX1Q9NSU2 AC006963.1-201ENST00000624003 1052 ntBASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms