Protein–RNA interactions for Protein: Q9NQ69

LHX9, LIM/homeobox protein Lhx9, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX9Q9NQ69 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
LHX9Q9NQ69 DNAJC19P8-201ENST00000452887 259 ntBASIC3.02□□□□□ -1.93
LHX9Q9NQ69 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.02□□□□□ -1.93
LHX9Q9NQ69 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC3.02□□□□□ -1.93
LHX9Q9NQ69 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.02□□□□□ -1.93
LHX9Q9NQ69 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.02□□□□□ -1.93
LHX9Q9NQ69 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
LHX9Q9NQ69 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC3.02□□□□□ -1.93
LHX9Q9NQ69 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC3.02□□□□□ -1.93
LHX9Q9NQ69 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC3.02□□□□□ -1.93
LHX9Q9NQ69 AL121603.1-201ENST00000553815 142 ntBASIC3.02□□□□□ -1.93
LHX9Q9NQ69 AC023825.1-201ENST00000566704 1030 ntBASIC3.02□□□□□ -1.93
LHX9Q9NQ69 ATP5F1P7-201ENST00000567330 760 ntBASIC3.02□□□□□ -1.93
LHX9Q9NQ69 AC090666.1-201ENST00000578241 445 ntBASIC3.02□□□□□ -1.93
LHX9Q9NQ69 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.02□□□□□ -1.93
LHX9Q9NQ69 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC3.02□□□□□ -1.93
LHX9Q9NQ69 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC3.02□□□□□ -1.93
LHX9Q9NQ69 PCNAP1-202ENST00000595299 752 ntBASIC3.02□□□□□ -1.93
LHX9Q9NQ69 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC3.02□□□□□ -1.93
LHX9Q9NQ69 BNIP3P31-201ENST00000604515 566 ntBASIC3.02□□□□□ -1.93
LHX9Q9NQ69 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC3.02□□□□□ -1.93
LHX9Q9NQ69 AC105227.2-201ENST00000615075 605 ntBASIC3.02□□□□□ -1.93
LHX9Q9NQ69 STMN1P1-201ENST00000617809 440 ntBASIC3.02□□□□□ -1.93
LHX9Q9NQ69 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
LHX9Q9NQ69 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.02□□□□□ -1.93
LHX9Q9NQ69 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.02□□□□□ -1.93
LHX9Q9NQ69 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.02□□□□□ -1.93
LHX9Q9NQ69 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
LHX9Q9NQ69 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.01□□□□□ -1.93
LHX9Q9NQ69 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.01□□□□□ -1.93
LHX9Q9NQ69 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.01□□□□□ -1.93
LHX9Q9NQ69 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
LHX9Q9NQ69 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
LHX9Q9NQ69 SNORA7.4-201ENST00000384249 137 ntBASIC3.01□□□□□ -1.93
LHX9Q9NQ69 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
LHX9Q9NQ69 RPL31P52-201ENST00000407532 367 ntBASIC3.01□□□□□ -1.93
LHX9Q9NQ69 AC092745.2-202ENST00000411880 369 ntBASIC3.01□□□□□ -1.93
LHX9Q9NQ69 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC3.01□□□□□ -1.93
LHX9Q9NQ69 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC3.01□□□□□ -1.93
LHX9Q9NQ69 AC246680.2-201ENST00000422106 389 ntBASIC3.01□□□□□ -1.93
LHX9Q9NQ69 HMGB1P45-201ENST00000435986 653 ntBASIC3.01□□□□□ -1.93
LHX9Q9NQ69 ELOCP11-201ENST00000436690 332 ntBASIC3.01□□□□□ -1.93
LHX9Q9NQ69 RPL23AP22-201ENST00000437556 453 ntBASIC3.01□□□□□ -1.93
LHX9Q9NQ69 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC3.01□□□□□ -1.93
LHX9Q9NQ69 AL138799.3-201ENST00000438968 350 ntBASIC3.01□□□□□ -1.93
LHX9Q9NQ69 RPS7P5-201ENST00000441482 581 ntBASIC3.01□□□□□ -1.93
LHX9Q9NQ69 ELOCP16-201ENST00000444494 332 ntBASIC3.01□□□□□ -1.93
LHX9Q9NQ69 AC140076.1-201ENST00000449897 361 ntBASIC3.01□□□□□ -1.93
LHX9Q9NQ69 AC011037.1-201ENST00000483964 558 ntBASIC3.01□□□□□ -1.93
LHX9Q9NQ69 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC3.01□□□□□ -1.93
LHX9Q9NQ69 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC3.01□□□□□ -1.93
LHX9Q9NQ69 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC3.01□□□□□ -1.93
LHX9Q9NQ69 RN7SKP289-201ENST00000517244 295 ntBASIC3.01□□□□□ -1.93
LHX9Q9NQ69 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC3.01□□□□□ -1.93
LHX9Q9NQ69 LY96-202ENST00000518893 430 ntTSL 3 BASIC3.01□□□□□ -1.93
LHX9Q9NQ69 AP003102.1-201ENST00000525638 661 ntBASIC3.01□□□□□ -1.93
LHX9Q9NQ69 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC3.01□□□□□ -1.93
LHX9Q9NQ69 PSMA2P1-201ENST00000526365 646 ntBASIC3.01□□□□□ -1.93
LHX9Q9NQ69 AC022080.3-201ENST00000544433 482 ntBASIC3.01□□□□□ -1.93
LHX9Q9NQ69 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC3.01□□□□□ -1.93
LHX9Q9NQ69 LYZ-203ENST00000549690 669 ntTSL 2 BASIC3.01□□□□□ -1.93
LHX9Q9NQ69 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC3.01□□□□□ -1.93
LHX9Q9NQ69 TRAV37-201ENST00000553906 342 ntBASIC3.01□□□□□ -1.93
LHX9Q9NQ69 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.01□□□□□ -1.93
LHX9Q9NQ69 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
LHX9Q9NQ69 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC3.01□□□□□ -1.93
LHX9Q9NQ69 AC124283.4-201ENST00000581815 456 ntBASIC3.01□□□□□ -1.93
LHX9Q9NQ69 DNAJC19P3-201ENST00000594491 331 ntBASIC3.01□□□□□ -1.93
LHX9Q9NQ69 AC069304.3-201ENST00000603938 1084 ntBASIC3.01□□□□□ -1.93
LHX9Q9NQ69 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.01□□□□□ -1.93
LHX9Q9NQ69 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
LHX9Q9NQ69 AL133445.2-201ENST00000611191 527 ntBASIC3.01□□□□□ -1.93
LHX9Q9NQ69 AC006386.2-201ENST00000624491 75 ntBASIC3.01□□□□□ -1.93
LHX9Q9NQ69 AC012005.1-201ENST00000624575 75 ntBASIC3.01□□□□□ -1.93
LHX9Q9NQ69 AP003072.4-201ENST00000624580 310 ntBASIC3.01□□□□□ -1.93
LHX9Q9NQ69 MTND5P24-201ENST00000438892 1767 ntBASIC3.01□□□□□ -1.93
LHX9Q9NQ69 MAPK10-362ENST00000641864 4484 ntBASIC3.01□□□□□ -1.93
LHX9Q9NQ69 AL365361.1-201ENST00000566942 3481 ntBASIC3.01□□□□□ -1.93
LHX9Q9NQ69 AC004972.1-201ENST00000623934 2209 ntBASIC3.01□□□□□ -1.93
LHX9Q9NQ69 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.01□□□□□ -1.93
LHX9Q9NQ69 AL672296.1-201ENST00000427780 2158 ntBASIC3.01□□□□□ -1.93
LHX9Q9NQ69 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.01□□□□□ -1.93
LHX9Q9NQ69 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
LHX9Q9NQ69 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
LHX9Q9NQ69 ELL2P4-201ENST00000446870 1376 ntBASIC3□□□□□ -1.93
LHX9Q9NQ69 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3□□□□□ -1.93
LHX9Q9NQ69 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC3□□□□□ -1.93
LHX9Q9NQ69 AL021368.2-201ENST00000606125 5352 ntBASIC3□□□□□ -1.93
LHX9Q9NQ69 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC3□□□□□ -1.93
LHX9Q9NQ69 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3□□□□□ -1.93
LHX9Q9NQ69 SEC63P2-201ENST00000503863 1939 ntBASIC3□□□□□ -1.93
LHX9Q9NQ69 OR1S2-201ENST00000302592 978 ntBASIC3□□□□□ -1.93
LHX9Q9NQ69 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC3□□□□□ -1.93
LHX9Q9NQ69 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC3□□□□□ -1.93
LHX9Q9NQ69 RNU6-468P-201ENST00000384003 109 ntBASIC3□□□□□ -1.93
LHX9Q9NQ69 RNU6-207P-201ENST00000384137 107 ntBASIC3□□□□□ -1.93
LHX9Q9NQ69 MIR591-201ENST00000385290 95 ntBASIC3□□□□□ -1.93
LHX9Q9NQ69 SNORD65C-201ENST00000390962 71 ntBASIC3□□□□□ -1.93
LHX9Q9NQ69 RPL5P18-201ENST00000406671 891 ntBASIC3□□□□□ -1.93
LHX9Q9NQ69 STAT4-203ENST00000409995 709 ntTSL 5 BASIC3□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 120.5 ms