Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
TM9SF3Q9HD45 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.47□□□□□ -1.85
TM9SF3Q9HD45 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
TM9SF3Q9HD45 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
TM9SF3Q9HD45 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
TM9SF3Q9HD45 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
TM9SF3Q9HD45 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
TM9SF3Q9HD45 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.47□□□□□ -1.85
TM9SF3Q9HD45 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
TM9SF3Q9HD45 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
TM9SF3Q9HD45 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC3.47□□□□□ -1.85
TM9SF3Q9HD45 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.47□□□□□ -1.85
TM9SF3Q9HD45 MIR649-201ENST00000384843 97 ntBASIC3.47□□□□□ -1.85
TM9SF3Q9HD45 MIR128-1-201ENST00000384921 82 ntBASIC3.47□□□□□ -1.85
TM9SF3Q9HD45 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC3.47□□□□□ -1.85
TM9SF3Q9HD45 AC096664.2-201ENST00000411843 406 ntBASIC3.47□□□□□ -1.85
TM9SF3Q9HD45 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.47□□□□□ -1.85
TM9SF3Q9HD45 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
TM9SF3Q9HD45 OR4K6P-201ENST00000416478 897 ntBASIC3.47□□□□□ -1.85
TM9SF3Q9HD45 GLRXP1-201ENST00000423261 334 ntBASIC3.47□□□□□ -1.85
TM9SF3Q9HD45 OSTCP5-201ENST00000425293 453 ntBASIC3.47□□□□□ -1.85
TM9SF3Q9HD45 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.47□□□□□ -1.85
TM9SF3Q9HD45 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC3.47□□□□□ -1.85
TM9SF3Q9HD45 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.47□□□□□ -1.85
TM9SF3Q9HD45 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.47□□□□□ -1.85
TM9SF3Q9HD45 SNORD59.2-201ENST00000516873 68 ntBASIC3.47□□□□□ -1.85
TM9SF3Q9HD45 HMGB1P1-201ENST00000522557 636 ntBASIC3.47□□□□□ -1.85
TM9SF3Q9HD45 AC124293.1-201ENST00000530034 493 ntBASIC3.47□□□□□ -1.85
TM9SF3Q9HD45 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.47□□□□□ -1.85
TM9SF3Q9HD45 AC106782.4-201ENST00000568264 210 ntBASIC3.47□□□□□ -1.85
TM9SF3Q9HD45 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC3.47□□□□□ -1.85
TM9SF3Q9HD45 AL110115.1-201ENST00000614396 364 ntBASIC3.47□□□□□ -1.85
TM9SF3Q9HD45 MIR7112-201ENST00000616126 65 ntBASIC3.47□□□□□ -1.85
TM9SF3Q9HD45 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.47□□□□□ -1.85
TM9SF3Q9HD45 MTND2P41-201ENST00000637599 773 ntBASIC3.47□□□□□ -1.85
TM9SF3Q9HD45 AC132825.7-201ENST00000638744 335 ntBASIC3.47□□□□□ -1.85
TM9SF3Q9HD45 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.47□□□□□ -1.85
TM9SF3Q9HD45 AC007656.2-201ENST00000624902 4547 ntBASIC3.47□□□□□ -1.85
TM9SF3Q9HD45 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC3.46□□□□□ -1.85
TM9SF3Q9HD45 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.46□□□□□ -1.85
TM9SF3Q9HD45 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.46□□□□□ -1.85
TM9SF3Q9HD45 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
TM9SF3Q9HD45 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
TM9SF3Q9HD45 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
TM9SF3Q9HD45 FRG1CP-201ENST00000358464 769 ntBASIC3.46□□□□□ -1.86
TM9SF3Q9HD45 RNU6-821P-201ENST00000390995 107 ntBASIC3.46□□□□□ -1.86
TM9SF3Q9HD45 RNU6-796P-201ENST00000391086 107 ntBASIC3.46□□□□□ -1.86
TM9SF3Q9HD45 RN7SKP53-201ENST00000411337 315 ntBASIC3.46□□□□□ -1.86
TM9SF3Q9HD45 RPP40P1-201ENST00000426762 456 ntBASIC3.46□□□□□ -1.86
TM9SF3Q9HD45 B3GNT2P1-201ENST00000434960 952 ntBASIC3.46□□□□□ -1.86
TM9SF3Q9HD45 RPS26P30-201ENST00000443431 335 ntBASIC3.46□□□□□ -1.86
TM9SF3Q9HD45 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC3.46□□□□□ -1.86
TM9SF3Q9HD45 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC3.46□□□□□ -1.86
TM9SF3Q9HD45 AC104308.1-201ENST00000454621 333 ntBASIC3.46□□□□□ -1.86
TM9SF3Q9HD45 ACTG1P13-201ENST00000486987 1043 ntBASIC3.46□□□□□ -1.86
TM9SF3Q9HD45 AC006483.1-201ENST00000487308 313 ntBASIC3.46□□□□□ -1.86
TM9SF3Q9HD45 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.46□□□□□ -1.86
TM9SF3Q9HD45 RNU6-579P-201ENST00000516879 102 ntBASIC3.46□□□□□ -1.86
TM9SF3Q9HD45 RNU4ATAC10P-201ENST00000516967 122 ntBASIC3.46□□□□□ -1.86
TM9SF3Q9HD45 IGKV2-26-201ENST00000518305 343 ntBASIC3.46□□□□□ -1.86
TM9SF3Q9HD45 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.46□□□□□ -1.86
TM9SF3Q9HD45 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC3.46□□□□□ -1.86
TM9SF3Q9HD45 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.46□□□□□ -1.86
TM9SF3Q9HD45 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC3.46□□□□□ -1.86
TM9SF3Q9HD45 AC012493.2-201ENST00000595083 291 ntBASIC3.46□□□□□ -1.86
TM9SF3Q9HD45 XIAPP1-201ENST00000603162 600 ntBASIC3.46□□□□□ -1.86
TM9SF3Q9HD45 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.46□□□□□ -1.86
TM9SF3Q9HD45 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.46□□□□□ -1.86
TM9SF3Q9HD45 AC105227.2-201ENST00000615075 605 ntBASIC3.46□□□□□ -1.86
TM9SF3Q9HD45 AC073968.1-201ENST00000618594 637 ntBASIC3.46□□□□□ -1.86
TM9SF3Q9HD45 AC006111.3-201ENST00000622137 383 ntBASIC3.46□□□□□ -1.86
TM9SF3Q9HD45 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.46□□□□□ -1.86
TM9SF3Q9HD45 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.46□□□□□ -1.86
TM9SF3Q9HD45 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
TM9SF3Q9HD45 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
TM9SF3Q9HD45 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC3.46□□□□□ -1.86
TM9SF3Q9HD45 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.46□□□□□ -1.86
TM9SF3Q9HD45 AC073073.2-201ENST00000609827 2578 ntBASIC3.46□□□□□ -1.86
TM9SF3Q9HD45 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.45□□□□□ -1.86
TM9SF3Q9HD45 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.45□□□□□ -1.86
TM9SF3Q9HD45 PAPPA-AS1-201ENST00000445861 2450 ntBASIC3.45□□□□□ -1.86
TM9SF3Q9HD45 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
TM9SF3Q9HD45 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.45□□□□□ -1.86
TM9SF3Q9HD45 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
TM9SF3Q9HD45 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
TM9SF3Q9HD45 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
TM9SF3Q9HD45 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
TM9SF3Q9HD45 Y_RNA.111-201ENST00000363248 100 ntBASIC3.45□□□□□ -1.86
TM9SF3Q9HD45 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
TM9SF3Q9HD45 SAR1AP2-201ENST00000392696 594 ntBASIC3.45□□□□□ -1.86
TM9SF3Q9HD45 AL136116.1-201ENST00000403591 381 ntBASIC3.45□□□□□ -1.86
TM9SF3Q9HD45 YPEL5P1-201ENST00000419731 367 ntBASIC3.45□□□□□ -1.86
TM9SF3Q9HD45 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC3.45□□□□□ -1.86
TM9SF3Q9HD45 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC3.45□□□□□ -1.86
TM9SF3Q9HD45 RPL21P40-201ENST00000428586 483 ntBASIC3.45□□□□□ -1.86
TM9SF3Q9HD45 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
TM9SF3Q9HD45 MRPS31P2-201ENST00000451581 518 ntBASIC3.45□□□□□ -1.86
TM9SF3Q9HD45 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.45□□□□□ -1.86
TM9SF3Q9HD45 AC023598.1-201ENST00000472521 361 ntBASIC3.45□□□□□ -1.86
TM9SF3Q9HD45 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 112.7 ms